RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 FGD6Q6ZV73 1430 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 CYP3A7-CYP3A51PA0A087WV96 503 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 SH2D7A6NKC9 451 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-222ENST00000545308 TCERG1O14776 1098 aaKnown RBP4.47□□□□□ -1.69
SNHG1-222ENST00000545308 PRAMEF2O60811 474 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 TULP3O75386 442 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 TIPRLO75663 272 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 URI1O94763 535 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-222ENST00000545308 WEE2P0C1S8 567 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 CYP3A7P24462 503 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 PCSK6P29122 969 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 CXCR5P32302 372 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 HOXD13P35453 343 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 PCP4P48539 62 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 HARS2P49590 506 aaKnown RBP4.47□□□□□ -1.69
SNHG1-222ENST00000545308 NAP1L1P55209 391 aaKnown RBP4.47□□□□□ -1.69
SNHG1-222ENST00000545308 NXPH1P58417 271 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 PSG6Q00889 435 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 CDK18Q07002 472 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 PTP4A2Q12974 167 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 CAMK1Q14012 370 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 SEC23BQ15437 767 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 ZNF618Q5T7W0 954 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 STRIP1Q5VSL9 837 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 ARMC6Q6NXE6 501 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 PDXDC1Q6P996 788 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 SYCE2Q6PIF2 218 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 SLC22A25Q6T423 547 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 Q6YL49 198 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 DIS3L2Q8IYB7 885 aaKnown RBP4.47□□□□□ -1.69
SNHG1-222ENST00000545308 LNX2Q8N448 690 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 PNPLA1Q8N8W4 532 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 GLMPQ8WWB7 406 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 RUFY2Q8WXA3 655 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 RFKQ969G6 155 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 LRRC59Q96AG4 307 aaKnown RBP4.47□□□□□ -1.69
SNHG1-222ENST00000545308 RNFT2Q96EX2 444 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 LENG8Q96PV6 779 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-222ENST00000545308 NUDT16L1Q9BRJ7 211 aaKnown RBP4.47□□□□□ -1.69
SNHG1-222ENST00000545308 ITPAQ9BY32 194 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 THAP1Q9NVV9 213 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 NSMCE4AQ9NXX6 385 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 TBC1D14Q9P2M4 693 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 MGAT4CQ9UBM8 478 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 CD207Q9UJ71 328 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 SH2B3Q9UQQ2 575 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 PSAT1Q9Y617 370 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 COPG1Q9Y678 874 aaKnown RBP4.47□□□□□ -1.69
SNHG1-222ENST00000545308 ROBO1Q9Y6N7 1651 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 STRCP1A6NGW2 1772 aa4.47□□□□□ -1.69
SNHG1-222ENST00000545308 NCOA3Q9Y6Q9 1424 aa4.46□□□□□ -1.69
SNHG1-222ENST00000545308 ABCC3O15438 1527 aa4.46□□□□□ -1.69
SNHG1-222ENST00000545308 ALKQ9UM73 1620 aa4.46□□□□□ -1.69
SNHG1-222ENST00000545308 XIRP1Q702N8 1843 aaKnown RBP4.46□□□□□ -1.69
SNHG1-222ENST00000545308 CCNB3Q8WWL7 1395 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 TMEM200CA6NKL6 621 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 CLEC3BP05452 202 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 CHRM2P08172 466 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 TMIGD3P0DMS9 266 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-222ENST00000545308 UBL4AP11441 157 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 ARSAP15289 507 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 PRKCHP24723 683 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 DIO1P49895 249 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 RAE1P78406 368 aaKnown RBP4.46□□□□□ -1.7
SNHG1-222ENST00000545308 TBL3Q12788 808 aaKnown RBP4.46□□□□□ -1.7
SNHG1-222ENST00000545308 CBFBQ13951 182 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 CCNG2Q16589 344 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 TEDDM1Q5T9Z0 273 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 WDR93Q6P2C0 686 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 INO80CQ6PI98 192 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-222ENST00000545308 ATF7IPQ6VMQ6 1270 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 CCDC129Q6ZRS4 1044 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 PTCHD4Q6ZW05 846 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 Q6ZWC4 215 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 ENOSF1Q7L5Y1 443 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 PXKQ7Z7A4 578 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 CPLX4Q7Z7G2 160 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 OR52L2PQ8NGH6 319 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 NFKBIDQ8NI38 313 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 METTL6Q8TCB7 284 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 ASB10Q8WXI3 467 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 PGBD1Q96JS3 809 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 MPHOSPH8Q99549 860 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 CLSTN3Q9BQT9 956 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 CTDSP1Q9GZU7 261 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 INTS2Q9H0H0 1204 aaKnown RBP4.46□□□□□ -1.7
SNHG1-222ENST00000545308 LMAN2LQ9H0V9 348 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 ADARB2Q9NS39 739 aaKnown RBP4.46□□□□□ -1.7
SNHG1-222ENST00000545308 SLC22A11Q9NSA0 550 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 KLC4Q9NSK0 619 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 MTMR4Q9NYA4 1195 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 BCCIPQ9P287 314 aaKnown RBP eCLIP4.46□□□□□ -1.7
SNHG1-222ENST00000545308 VPS4AQ9UN37 437 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 ENTPD2Q9Y5L3 495 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 KDM3AQ9Y4C1 1321 aa4.46□□□□□ -1.7
SNHG1-222ENST00000545308 PLXNC1O60486 1568 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 SCAF11Q99590 1463 aaKnown RBP4.45□□□□□ -1.7
SNHG1-222ENST00000545308 NPIPB13A6NJU9 1138 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 NPIPB5A8MRT5 1133 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 NPIPB4C9JG80 1138 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms