RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 LIN7AO14910 233 aaPredicted RBP5.9□□□□□ -1.47
VPS50-220ENST00000544910 TMEM63AO94886 807 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 PAX7P23759 505 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 TPP2P29144 1249 aaPredicted RBP5.9□□□□□ -1.47
VPS50-220ENST00000544910 GPD2P43304 727 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 CD151P48509 253 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 ATXN3P54252 364 aaPredicted RBP5.9□□□□□ -1.47
VPS50-220ENST00000544910 SREBF2Q12772 1141 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 TRIM16LQ309B1 348 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 SLC10A6Q3KNW5 377 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 ACCSLQ4AC99 568 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 DUSP28Q4G0W2 176 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 PCID2Q5JVF3 399 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 IRGCQ6NXR0 463 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 RHBDF2Q6PJF5 856 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 CLNKQ7Z7G1 428 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 OR9Q1Q8NGQ5 310 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 GDPD5Q8WTR4 605 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 ZBED3Q96IU2 234 aaPredicted RBP5.9□□□□□ -1.47
VPS50-220ENST00000544910 APBA2Q99767 749 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 PRKD2Q9BZL6 878 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 LRCH1Q9Y2L9 728 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 TAF1LQ8IZX4 1826 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 ADGRA2Q96PE1 1338 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 NDUFS3O75489 264 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 SKAP2O75563 359 aaPredicted RBP5.9□□□□□ -1.47
VPS50-220ENST00000544910 RHOBTB1O94844 696 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 ARIH2O95376 493 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 CSE1LP55060 971 aaKnown RBP5.9□□□□□ -1.47
VPS50-220ENST00000544910 BEX3Q00994 111 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 STX5Q13190 355 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 CSHL1Q14406 222 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 TARBP2Q15633 366 aaKnown RBP5.9□□□□□ -1.47
VPS50-220ENST00000544910 MGAT5BQ3V5L5 792 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 SH3PXD2AQ5TCZ1 1133 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 SMYD5Q6GMV2 418 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 ANKRD23Q86SG2 305 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 SLC41A1Q8IVJ1 513 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 C10orf107Q8IVU9 208 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 KYQ8NBH2 561 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 CCT7Q99832 543 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 POMKQ9H5K3 350 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 FBXO6Q9NRD1 293 aaPredicted RBP5.9□□□□□ -1.47
VPS50-220ENST00000544910 ABCC13Q9NSE7 274 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 HACD3Q9P035 362 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 AURKCQ9UQB9 309 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 TELO2Q9Y4R8 837 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 LYPLA1O75608 230 aaPredicted RBP5.89□□□□□ -1.47
VPS50-220ENST00000544910 POMCP01189 267 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 HSPA1AP0DMV8 641 aaKnown RBP5.89□□□□□ -1.47
VPS50-220ENST00000544910 HSPA1BP0DMV9 641 aaKnown RBP5.89□□□□□ -1.47
VPS50-220ENST00000544910 RAG1P15918 1043 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 NFKB1P19838 968 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 CYP2C18P33260 490 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 RPL14P50914 215 aaKnown RBP5.89□□□□□ -1.47
VPS50-220ENST00000544910 HUNKP57058 714 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 WDR4P57081 412 aaKnown RBP5.89□□□□□ -1.47
VPS50-220ENST00000544910 RAD51Q06609 339 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 ILF2Q12905 390 aaKnown RBP5.89□□□□□ -1.47
VPS50-220ENST00000544910 TMEM259Q4ZIN3 620 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 SLC26A9Q7LBE3 791 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 EFL1Q7Z2Z2 1120 aaKnown RBP5.89□□□□□ -1.47
VPS50-220ENST00000544910 ADCK1Q86TW2 530 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.89□□□□□ -1.47
VPS50-220ENST00000544910 FAM13CQ8NE31 585 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 SOCS4Q8WXH5 440 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 MYLPFQ96A32 169 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 P2RY11Q96G91 374 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 CNBD2Q96M20 576 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 GCNAQ96QF7 691 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 C12orf65Q9H3J6 166 aaKnown RBP5.89□□□□□ -1.47
VPS50-220ENST00000544910 NT5MQ9NPB1 228 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 EIF2B3Q9NR50 452 aaKnown RBP5.89□□□□□ -1.47
VPS50-220ENST00000544910 SNX15Q9NRS6 342 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 NCKIPSDQ9NZQ3 722 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 OR12D3Q9UGF7 316 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 LNPEPQ9UIQ6 1025 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 CHKBQ9Y259 395 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 PCDHB7Q9Y5E2 793 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 FAM95CA0A1B0GW59 222 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 HEATR9A2RTY3 570 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 AKAP10O43572 662 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 USP12O75317 370 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 ENTPD5O75356 428 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 KRT36O76013 467 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 DDHD2O94830 711 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 AKR1A1P14550 325 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 DARSP14868 501 aaKnown RBP5.89□□□□□ -1.47
VPS50-220ENST00000544910 WARSP23381 471 aaKnown RBP5.89□□□□□ -1.47
VPS50-220ENST00000544910 S100A5P33763 92 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 NUP107P57740 925 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 FSTL1Q12841 308 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 CYTH1Q15438 398 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 CA9Q16790 459 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 IMPG1Q17R60 797 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 PAN2Q504Q3 1202 aaKnown RBP5.89□□□□□ -1.47
VPS50-220ENST00000544910 TCHHL1Q5QJ38 904 aaPredicted RBP5.89□□□□□ -1.47
VPS50-220ENST00000544910 MAP1SQ66K74 1059 aaPredicted RBP5.89□□□□□ -1.47
VPS50-220ENST00000544910 OVOS1Q6IE37 1185 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 CROCCP3Q8IVE0 287 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms