RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 ACER1Q8TDN7 264 aa12.92□□□□□ -0.34
SMG8-202ENST00000543872 MAELQ96JY0 434 aaKnown RBP12.92□□□□□ -0.34
SMG8-202ENST00000543872 HERC2P3Q9BVR0 1158 aa12.92□□□□□ -0.34
SMG8-202ENST00000543872 ILKAPQ9H0C8 392 aaPredicted RBP12.92□□□□□ -0.34
SMG8-202ENST00000543872 CISHQ9NSE2 258 aa12.92□□□□□ -0.34
SMG8-202ENST00000543872 MRPL11Q9Y3B7 192 aaKnown RBP12.92□□□□□ -0.34
SMG8-202ENST00000543872 PCDHA11Q9Y5I1 949 aa12.92□□□□□ -0.34
SMG8-202ENST00000543872 SPDYE2BA6NHP3 402 aa12.92□□□□□ -0.34
SMG8-202ENST00000543872 SOBPA7XYQ1 873 aa12.92□□□□□ -0.34
SMG8-202ENST00000543872 KCNU1A8MYU2 1149 aa12.92□□□□□ -0.34
SMG8-202ENST00000543872 DHX15O43143 795 aaKnown RBP12.92□□□□□ -0.34
SMG8-202ENST00000543872 LTFP02788 710 aa12.92□□□□□ -0.34
SMG8-202ENST00000543872 PRKCGP05129 697 aa12.92□□□□□ -0.34
SMG8-202ENST00000543872 SPDYE6P0CI01 402 aa12.92□□□□□ -0.34
SMG8-202ENST00000543872 JAK1P23458 1154 aa12.92□□□□□ -0.34
SMG8-202ENST00000543872 EEF1B2P24534 225 aaKnown RBP12.92□□□□□ -0.34
SMG8-202ENST00000543872 MZF1P28698 734 aaPredicted RBP12.92□□□□□ -0.34
SMG8-202ENST00000543872 POLR2BP30876 1174 aaKnown RBP12.92□□□□□ -0.34
SMG8-202ENST00000543872 DLG2Q15700 870 aa12.92□□□□□ -0.34
SMG8-202ENST00000543872 CARTPTQ16568 116 aa12.92□□□□□ -0.34
SMG8-202ENST00000543872 MOGQ16653 247 aa12.92□□□□□ -0.34
SMG8-202ENST00000543872 SPDYE2Q495Y8 402 aa12.92□□□□□ -0.34
SMG8-202ENST00000543872 LRRC8EQ6NSJ5 796 aa12.92□□□□□ -0.34
SMG8-202ENST00000543872 APOBEC3HQ6NTF7 200 aaKnown RBP12.92□□□□□ -0.34
SMG8-202ENST00000543872 DCLRE1AQ6PJP8 1040 aa12.92□□□□□ -0.34
SMG8-202ENST00000543872 GK5Q6ZS86 529 aa12.92□□□□□ -0.34
SMG8-202ENST00000543872 GABPB2Q8TAK5 448 aaPredicted RBP12.92□□□□□ -0.34
SMG8-202ENST00000543872 SDCBP2Q9H190 292 aa12.92□□□□□ -0.34
SMG8-202ENST00000543872 NXF1Q9UBU9 619 aaKnown RBP12.92□□□□□ -0.34
SMG8-202ENST00000543872 UNCXA6NJT0 531 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 TRIM38O00635 465 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 TRUB2O95900 331 aaKnown RBP12.91□□□□□ -0.34
SMG8-202ENST00000543872 HDCP19113 662 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 PGGT1BP53609 377 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 PSME3P61289 254 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 LRP8Q14114 963 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 TFDP2Q14188 446 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 C15orf59Q2T9L4 293 aaPredicted RBP12.91□□□□□ -0.34
SMG8-202ENST00000543872 PITRM1Q5JRX3 1037 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 CBR4Q8N4T8 237 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 NIPA2Q8N8Q9 360 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 CMASQ8NFW8 434 aaPredicted RBP12.91□□□□□ -0.34
SMG8-202ENST00000543872 TANKQ92844 425 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 PEBP4Q96S96 227 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 GATA5Q9BWX5 397 aaPredicted RBP12.91□□□□□ -0.34
SMG8-202ENST00000543872 NPLQ9BXD5 320 aaPredicted RBP12.91□□□□□ -0.34
SMG8-202ENST00000543872 CAB39LQ9H9S4 337 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 SIAEQ9HAT2 523 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 NCKIPSDQ9NZQ3 722 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 CARD8Q9Y2G2 431 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 HES2Q9Y543 173 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.91□□□□□ -0.34
SMG8-202ENST00000543872 E7ENX8 843 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 AQP9O43315 295 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 ERBB2P04626 1255 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 GARTP22102 1010 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 MYL6P60660 151 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 MTMR1Q13613 665 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 KCNJ8Q15842 424 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 ZNF618Q5T7W0 954 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 SEL1L3Q68CR1 1132 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 TIFABQ6ZNK6 161 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 NETO2Q8NC67 525 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 ITPKCQ96DU7 683 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 SMOXQ9NWM0 555 aa12.91□□□□□ -0.34
SMG8-202ENST00000543872 BCL10O95999 233 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 TCEA1P23193 301 aaKnown RBP12.9□□□□□ -0.34
SMG8-202ENST00000543872 GRM5P41594 1212 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 FSTL1Q12841 308 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 KCTD8Q6ZWB6 473 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 CPXCR1Q8N123 301 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 PLD5Q8N7P1 536 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 DUS2Q9NX74 493 aaKnown RBP12.9□□□□□ -0.34
SMG8-202ENST00000543872 GMPR2Q9P2T1 348 aaKnown RBP12.9□□□□□ -0.34
SMG8-202ENST00000543872 DKK3Q9UBP4 350 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 CYTH4Q9UIA0 394 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 GNPTGQ9UJJ9 305 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 POU2F3Q9UKI9 436 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 ERGIC3Q9Y282 383 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 TRIM64CA6NLI5 447 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.9□□□□□ -0.34
SMG8-202ENST00000543872 SULT1C4O75897 302 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 PIGNO95427 931 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 JUNP05412 331 aaKnown RBP12.9□□□□□ -0.34
SMG8-202ENST00000543872 NAT2P11245 290 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 PRKCQQ04759 706 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 TRIM25Q14258 630 aaKnown RBP12.9□□□□□ -0.34
SMG8-202ENST00000543872 TKFCQ3LXA3 575 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 IGFN1Q86VF2 1251 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 LDHDQ86WU2 507 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 ANKK1Q8NFD2 765 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 CCDC138Q96M89 665 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 MSTO1Q9BUK6 570 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 TARS2Q9BW92 718 aaKnown RBP12.9□□□□□ -0.34
SMG8-202ENST00000543872 SOX17Q9H6I2 414 aaPredicted RBP12.9□□□□□ -0.34
SMG8-202ENST00000543872 CNOT11Q9UKZ1 510 aaKnown RBP12.9□□□□□ -0.34
SMG8-202ENST00000543872 SOX11P35716 441 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 IRF9Q00978 393 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 STILQ15468 1287 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 PGS1Q32NB8 556 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms