RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 PITX1P78337 314 aaPredicted RBP23.3■■□□□ 1.32
CDKN3-207ENST00000543789 SEMG2Q02383 582 aa23.3■■□□□ 1.32
CDKN3-207ENST00000543789 OVGP1Q12889 678 aa23.3■■□□□ 1.32
CDKN3-207ENST00000543789 ILKQ13418 452 aa23.3■■□□□ 1.32
CDKN3-207ENST00000543789 STAT4Q14765 748 aa23.3■■□□□ 1.32
CDKN3-207ENST00000543789 ACCSLQ4AC99 568 aa23.3■■□□□ 1.32
CDKN3-207ENST00000543789 TTC39BQ5VTQ0 682 aaPredicted RBP23.3■■□□□ 1.32
CDKN3-207ENST00000543789 SFMBT2Q5VUG0 894 aa23.3■■□□□ 1.32
CDKN3-207ENST00000543789 FBXL19Q6PCT2 694 aa23.3■■□□□ 1.32
CDKN3-207ENST00000543789 IQCHQ86VS3 1027 aa23.3■■□□□ 1.32
CDKN3-207ENST00000543789 CIR1Q86X95 450 aaPredicted RBP23.3■■□□□ 1.32
CDKN3-207ENST00000543789 SPATS2Q86XZ4 545 aaKnown RBP23.3■■□□□ 1.32
CDKN3-207ENST00000543789 PIP4K2CQ8TBX8 421 aa23.3■■□□□ 1.32
CDKN3-207ENST00000543789 NELFBQ8WX92 580 aa23.3■■□□□ 1.32
CDKN3-207ENST00000543789 OR8D1Q8WZ84 308 aa23.3■■□□□ 1.32
CDKN3-207ENST00000543789 FAM131CQ96AQ9 280 aa23.3■■□□□ 1.32
CDKN3-207ENST00000543789 NRSN2Q9GZP1 204 aa23.3■■□□□ 1.32
CDKN3-207ENST00000543789 INTS2Q9H0H0 1204 aaKnown RBP23.3■■□□□ 1.32
CDKN3-207ENST00000543789 UBE2TQ9NPD8 197 aaPredicted RBP23.3■■□□□ 1.32
CDKN3-207ENST00000543789 CYTH4Q9UIA0 394 aa23.3■■□□□ 1.32
CDKN3-207ENST00000543789 DMTF1Q9Y222 760 aa23.3■■□□□ 1.32
CDKN3-207ENST00000543789 KNTC1P50748 2209 aa23.29■■□□□ 1.32
CDKN3-207ENST00000543789 ASXL3Q9C0F0 2248 aa23.29■■□□□ 1.32
CDKN3-207ENST00000543789 A0A1B0GVM2 712 aa23.29■■□□□ 1.32
CDKN3-207ENST00000543789 TCAF2A6NFQ2 919 aa23.29■■□□□ 1.32
CDKN3-207ENST00000543789 GNA14O95837 355 aa23.29■■□□□ 1.32
CDKN3-207ENST00000543789 CKMT2P17540 419 aa23.29■■□□□ 1.32
CDKN3-207ENST00000543789 MAT2AP31153 395 aaKnown RBP23.29■■□□□ 1.32
CDKN3-207ENST00000543789 CCR1P32246 355 aa23.29■■□□□ 1.32
CDKN3-207ENST00000543789 METAP1P53582 386 aa23.29■■□□□ 1.32
CDKN3-207ENST00000543789 CDK17Q00537 523 aa23.29■■□□□ 1.32
CDKN3-207ENST00000543789 TAF5Q15542 800 aa23.29■■□□□ 1.32
CDKN3-207ENST00000543789 RABGAP1LQ5R372 815 aa23.29■■□□□ 1.32
CDKN3-207ENST00000543789 FOXR2Q6PJQ5 311 aa23.29■■□□□ 1.32
CDKN3-207ENST00000543789 TRIM59Q8IWR1 403 aa23.29■■□□□ 1.32
CDKN3-207ENST00000543789 TMEM131Q92545 1883 aa23.29■■□□□ 1.32
CDKN3-207ENST00000543789 RNF34Q969K3 372 aa23.29■■□□□ 1.32
CDKN3-207ENST00000543789 SARDHQ9UL12 918 aa23.29■■□□□ 1.32
CDKN3-207ENST00000543789 IGSF10Q6WRI0 2623 aa23.29■■□□□ 1.32
CDKN3-207ENST00000543789 BICDL2A1A5D9 508 aa23.28■■□□□ 1.32
CDKN3-207ENST00000543789 PPP1R3GB7ZBB8 358 aa23.28■■□□□ 1.32
CDKN3-207ENST00000543789 THAP12O43422 761 aa23.28■■□□□ 1.32
CDKN3-207ENST00000543789 PLRG1O43660 514 aaKnown RBP23.28■■□□□ 1.32
CDKN3-207ENST00000543789 ATP9BO43861 1147 aa23.28■■□□□ 1.32
CDKN3-207ENST00000543789 AFPP02771 609 aaKnown RBP23.28■■□□□ 1.32
CDKN3-207ENST00000543789 ITPKBP27987 946 aa23.28■■□□□ 1.32
CDKN3-207ENST00000543789 EIF2S3P41091 472 aaKnown RBP23.28■■□□□ 1.32
CDKN3-207ENST00000543789 RTP5Q14D33 572 aa23.28■■□□□ 1.32
CDKN3-207ENST00000543789 CXorf57Q6NSI4 855 aaKnown RBP23.28■■□□□ 1.32
CDKN3-207ENST00000543789 FBXL22Q6P050 247 aa23.28■■□□□ 1.32
CDKN3-207ENST00000543789 LRRC69Q6ZNQ3 347 aa23.28■■□□□ 1.32
CDKN3-207ENST00000543789 KANSL1Q7Z3B3 1105 aa23.28■■□□□ 1.32
CDKN3-207ENST00000543789 ELOA2Q8IYF1 753 aaPredicted RBP23.28■■□□□ 1.32
CDKN3-207ENST00000543789 UBL7Q96S82 380 aaPredicted RBP23.28■■□□□ 1.32
CDKN3-207ENST00000543789 FAM204AQ9H8W3 233 aa23.28■■□□□ 1.32
CDKN3-207ENST00000543789 PPM1HQ9ULR3 514 aa23.28■■□□□ 1.32
CDKN3-207ENST00000543789 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.28■■□□□ 1.32
CDKN3-207ENST00000543789 RRP8O43159 456 aaKnown RBP23.27■■□□□ 1.32
CDKN3-207ENST00000543789 ZNF18P17022 549 aa23.27■■□□□ 1.32
CDKN3-207ENST00000543789 GNA15P30679 374 aa23.27■■□□□ 1.32
CDKN3-207ENST00000543789 PDCLQ13371 301 aa23.27■■□□□ 1.32
CDKN3-207ENST00000543789 DLG2Q15700 870 aa23.27■■□□□ 1.32
CDKN3-207ENST00000543789 TRIM69Q86WT6 500 aa23.27■■□□□ 1.32
CDKN3-207ENST00000543789 DEFB106AQ8N104 65 aa23.27■■□□□ 1.32
CDKN3-207ENST00000543789 ALG14Q96F25 216 aa23.27■■□□□ 1.32
CDKN3-207ENST00000543789 RPRD1AQ96P16 312 aaPredicted RBP23.27■■□□□ 1.32
CDKN3-207ENST00000543789 FEM1AQ9BSK4 669 aa23.27■■□□□ 1.32
CDKN3-207ENST00000543789 DDIT4Q9NX09 232 aa23.27■■□□□ 1.32
CDKN3-207ENST00000543789 SLC25A13Q9UJS0 675 aa23.27■■□□□ 1.32
CDKN3-207ENST00000543789 COL5A1P20908 1838 aaPredicted RBP23.26■■□□□ 1.31
CDKN3-207ENST00000543789 SYNJ2BP-COX16A0A087WUM0 186 aa23.26■■□□□ 1.31
CDKN3-207ENST00000543789 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.26■■□□□ 1.31
CDKN3-207ENST00000543789 C1QTNF3-AMACRE9PGA6 284 aa23.26■■□□□ 1.31
CDKN3-207ENST00000543789 MCF2LO15068 1137 aa23.26■■□□□ 1.31
CDKN3-207ENST00000543789 TLX3O43711 291 aaPredicted RBP23.26■■□□□ 1.31
CDKN3-207ENST00000543789 GLI1P08151 1106 aa23.26■■□□□ 1.31
CDKN3-207ENST00000543789 CNTN1Q12860 1018 aa23.26■■□□□ 1.31
CDKN3-207ENST00000543789 ZNF177Q13360 481 aaPredicted RBP23.26■■□□□ 1.31
CDKN3-207ENST00000543789 AUHQ13825 339 aaKnown RBP23.26■■□□□ 1.31
CDKN3-207ENST00000543789 POM121L1PQ3SYA9 428 aa23.26■■□□□ 1.31
CDKN3-207ENST00000543789 AGBL4Q5VU57 503 aa23.26■■□□□ 1.31
CDKN3-207ENST00000543789 ENOSF1Q7L5Y1 443 aa23.26■■□□□ 1.31
CDKN3-207ENST00000543789 CACTIN-AS1Q8N1I8 211 aa23.26■■□□□ 1.31
CDKN3-207ENST00000543789 ACP6Q9NPH0 428 aa23.26■■□□□ 1.31
CDKN3-207ENST00000543789 COX16Q9P0S2 106 aa23.26■■□□□ 1.31
CDKN3-207ENST00000543789 PRAMEF26H0Y7S4 382 aa23.25■■□□□ 1.31
CDKN3-207ENST00000543789 ALOX15BO15296 676 aa23.25■■□□□ 1.31
CDKN3-207ENST00000543789 BMP6P22004 513 aa23.25■■□□□ 1.31
CDKN3-207ENST00000543789 MARSP56192 900 aaKnown RBP23.25■■□□□ 1.31
CDKN3-207ENST00000543789 MTA1Q13330 715 aa23.25■■□□□ 1.31
CDKN3-207ENST00000543789 SETMARQ53H47 684 aaPredicted RBP23.25■■□□□ 1.31
CDKN3-207ENST00000543789 EFHC1Q5JVL4 640 aa23.25■■□□□ 1.31
CDKN3-207ENST00000543789 SLC2A13Q96QE2 648 aa23.25■■□□□ 1.31
CDKN3-207ENST00000543789 SRRTQ9BXP5 876 aaKnown RBP23.25■■□□□ 1.31
CDKN3-207ENST00000543789 PRORYQ9H606 182 aa23.25■■□□□ 1.31
CDKN3-207ENST00000543789 ASNSD1Q9NWL6 643 aa23.25■■□□□ 1.31
CDKN3-207ENST00000543789 CTNND2Q9UQB3 1225 aa23.25■■□□□ 1.31
CDKN3-207ENST00000543789 ACP1P24666 158 aa23.24■■□□□ 1.31
CDKN3-207ENST00000543789 STX17P56962 302 aa23.24■■□□□ 1.31
CDKN3-207ENST00000543789 CENPCQ03188 943 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms