RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 PSMD12O00232 456 aaPredicted RBP8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 PAPSS1O43252 624 aaPredicted RBP8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 SLC2A3P11169 496 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 ZNF23P17027 643 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 CHRM3P20309 590 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 XIAPP98170 497 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 MOGSQ13724 837 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 LIN52Q52LA3 116 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 SAMD4BQ5PRF9 694 aaKnown RBP8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 ANO7Q6IWH7 933 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 PIWIL4Q7Z3Z4 852 aaKnown RBP8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 FAM228AQ86W67 206 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 DNAJB3Q8WWF6 145 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 RCN3Q96D15 328 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 RMND5BQ96G75 393 aaPredicted RBP8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 MAML3Q96JK9 1138 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 GPR20Q99678 358 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 SEMA6AQ9H2E6 1030 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 GPRC5DQ9NZD1 345 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 CD274Q9NZQ7 290 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 PSMD13Q9UNM6 376 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 FAM95CA0A1B0GW59 222 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 EME2A4GXA9 379 aaPredicted RBP8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 TMEM114B3SHH9 223 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 GRIN3BO60391 1043 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 GCATO75600 419 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 USP17L7P0C7H9 530 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 CSH1P0DML2 217 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 CSH2P0DML3 217 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 CPB1P15086 417 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 NPR3P17342 541 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 PTPN1P18031 435 aaKnown RBP8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 FASP25445 335 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 CCR1P32246 355 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 ACTR3P61158 418 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 ZBTB17Q13105 803 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 VGLL4Q14135 290 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 GJC2Q5T442 439 aaPredicted RBP8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 VWA5B1Q5TIE3 1220 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 LBX2Q6XYB7 198 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 B3GNT6Q6ZMB0 384 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 LRRC52Q8N7C0 313 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 C2orf69Q8N8R5 385 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 MTMR14Q8NCE2 650 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 ZNF555Q8NEP9 628 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 UCMAQ8WVF2 138 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 VPS50Q96JG6 964 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 OMDQ99983 421 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 MRPL45Q9BRJ2 306 aaKnown RBP8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 CDH19Q9H159 772 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 HACD3Q9P035 362 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 CDH22Q9UJ99 828 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 MYRFQ9Y2G1 1151 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 TEX264Q9Y6I9 313 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 CAPN8A6NHC0 703 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 SAC3D1A6NKF1 404 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 TRAFD1O14545 582 aaPredicted RBP8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 IRF6O14896 467 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 PEX1O43933 1283 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 ODC1P11926 461 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 ETS2P15036 469 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 NFKB1P19838 968 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 PIK3R1P27986 724 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 RENBPP51606 427 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 GTF2A2P52657 109 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 NFYCQ13952 458 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 SLC25A52Q3SY17 297 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 PCID2Q5JVF3 399 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 MARC1Q5VT66 337 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 LIPMQ5VYY2 423 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 LZTR1Q8N653 840 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 EFHBQ8N7U6 833 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 B3GALNT2Q8NCR0 500 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 DENND1AQ8TEH3 1009 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 KCTD4Q8WVF5 259 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 WDR60Q8WVS4 1066 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 DGCR14Q96DF8 476 aaKnown RBP8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 KLRG1Q96E93 195 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 EBF4Q9BQW3 602 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 CCDC28BQ9BUN5 200 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 ASPSCR1Q9BZE9 553 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 CAB39LQ9H9S4 337 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 CDHR5Q9HBB8 845 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 NT5MQ9NPB1 228 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 TMEM216Q9P0N5 145 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 SLC30A1Q9Y6M5 507 aa8.35□□□□□ -1.07
PRKAB1-207ENST00000542698 C10orf71Q711Q0 1435 aa8.34□□□□□ -1.07
PRKAB1-207ENST00000542698 CCL15-CCL14A0A0B4J2E2 113 aa8.34□□□□□ -1.07
PRKAB1-207ENST00000542698 UGT1A9O60656 530 aa8.34□□□□□ -1.07
PRKAB1-207ENST00000542698 METTL18O95568 372 aa8.34□□□□□ -1.07
PRKAB1-207ENST00000542698 HOXC6P09630 235 aa8.34□□□□□ -1.07
PRKAB1-207ENST00000542698 ADCYAP1R1P41586 468 aa8.34□□□□□ -1.07
PRKAB1-207ENST00000542698 ASPAP45381 313 aa8.34□□□□□ -1.07
PRKAB1-207ENST00000542698 ZNF135P52742 658 aaPredicted RBP8.34□□□□□ -1.07
PRKAB1-207ENST00000542698 POU4F1Q01851 419 aa8.34□□□□□ -1.07
PRKAB1-207ENST00000542698 SLC18A2Q05940 514 aa8.34□□□□□ -1.07
PRKAB1-207ENST00000542698 CCL15Q16663 113 aa8.34□□□□□ -1.07
PRKAB1-207ENST00000542698 GNASQ5JWF2 1037 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms