RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 CLDN6P56747 220 aa24.71■■□□□ 1.55
LEMD3-203ENST00000541171 DNAJC3Q13217 504 aa24.71■■□□□ 1.55
LEMD3-203ENST00000541171 TTC39BQ5VTQ0 682 aaPredicted RBP24.71■■□□□ 1.55
LEMD3-203ENST00000541171 CXorf57Q6NSI4 855 aaKnown RBP24.71■■□□□ 1.55
LEMD3-203ENST00000541171 TRIM65Q6PJ69 517 aa24.71■■□□□ 1.55
LEMD3-203ENST00000541171 WDTC1Q8N5D0 677 aa24.71■■□□□ 1.55
LEMD3-203ENST00000541171 PDCD7Q8N8D1 485 aaKnown RBP24.71■■□□□ 1.55
LEMD3-203ENST00000541171 SAP25Q8TEE9 199 aa24.71■■□□□ 1.55
LEMD3-203ENST00000541171 FRS2Q8WU20 508 aa24.71■■□□□ 1.55
LEMD3-203ENST00000541171 PPP1R13BQ96KQ4 1090 aa24.71■■□□□ 1.55
LEMD3-203ENST00000541171 SLC2A13Q96QE2 648 aa24.71■■□□□ 1.55
LEMD3-203ENST00000541171 SPAG5Q96R06 1193 aa24.71■■□□□ 1.55
LEMD3-203ENST00000541171 DKK4Q9UBT3 224 aa24.71■■□□□ 1.55
LEMD3-203ENST00000541171 LAMA5O15230 3695 aa24.71■■□□□ 1.55
LEMD3-203ENST00000541171 GGCXP38435 758 aa24.7■■□□□ 1.54
LEMD3-203ENST00000541171 ARRB1P49407 418 aaPredicted RBP24.7■■□□□ 1.54
LEMD3-203ENST00000541171 NXPH1P58417 271 aa24.7■■□□□ 1.54
LEMD3-203ENST00000541171 BNIP3Q12983 259 aa24.7■■□□□ 1.54
LEMD3-203ENST00000541171 NME3Q13232 169 aa24.7■■□□□ 1.54
LEMD3-203ENST00000541171 POM121L1PQ3SYA9 428 aa24.7■■□□□ 1.54
LEMD3-203ENST00000541171 EFHC1Q5JVL4 640 aa24.7■■□□□ 1.54
LEMD3-203ENST00000541171 OR6B2Q6IFH4 312 aa24.7■■□□□ 1.54
LEMD3-203ENST00000541171 PRPF39Q86UA1 669 aaKnown RBP24.7■■□□□ 1.54
LEMD3-203ENST00000541171 OR8D1Q8WZ84 308 aa24.7■■□□□ 1.54
LEMD3-203ENST00000541171 SLC25A13Q9UJS0 675 aa24.7■■□□□ 1.54
LEMD3-203ENST00000541171 SARDHQ9UL12 918 aa24.7■■□□□ 1.54
LEMD3-203ENST00000541171 VANGL2Q9ULK5 521 aa24.7■■□□□ 1.54
LEMD3-203ENST00000541171 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.69■■□□□ 1.54
LEMD3-203ENST00000541171 C10orf142B7Z368 130 aa24.69■■□□□ 1.54
LEMD3-203ENST00000541171 BNIP3LO60238 219 aa24.69■■□□□ 1.54
LEMD3-203ENST00000541171 HSF2BPO75031 334 aa24.69■■□□□ 1.54
LEMD3-203ENST00000541171 GLI1P08151 1106 aa24.69■■□□□ 1.54
LEMD3-203ENST00000541171 IRAK1P51617 712 aa24.69■■□□□ 1.54
LEMD3-203ENST00000541171 OXCT1P55809 520 aa24.69■■□□□ 1.54
LEMD3-203ENST00000541171 ZNF177Q13360 481 aaPredicted RBP24.69■■□□□ 1.54
LEMD3-203ENST00000541171 AUHQ13825 339 aaKnown RBP24.69■■□□□ 1.54
LEMD3-203ENST00000541171 NAPEPLDQ6IQ20 393 aa24.69■■□□□ 1.54
LEMD3-203ENST00000541171 FAM183BPQ6ZVS7 135 aa24.69■■□□□ 1.54
LEMD3-203ENST00000541171 DSG4Q86SJ6 1040 aa24.69■■□□□ 1.54
LEMD3-203ENST00000541171 OR52K2Q8NGK3 314 aa24.69■■□□□ 1.54
LEMD3-203ENST00000541171 LRIG1Q96JA1 1093 aa24.69■■□□□ 1.54
LEMD3-203ENST00000541171 FAM81BQ96LP2 452 aa24.69■■□□□ 1.54
LEMD3-203ENST00000541171 TPX2Q9ULW0 747 aaKnown RBP24.69■■□□□ 1.54
LEMD3-203ENST00000541171 URB1O60287 2271 aaKnown RBP24.69■■□□□ 1.54
LEMD3-203ENST00000541171 TP53BP1Q12888 1972 aaPredicted RBP24.69■■□□□ 1.54
LEMD3-203ENST00000541171 YKT6O15498 198 aa24.68■■□□□ 1.54
LEMD3-203ENST00000541171 JUPP14923 745 aa24.68■■□□□ 1.54
LEMD3-203ENST00000541171 ZNF18P17022 549 aa24.68■■□□□ 1.54
LEMD3-203ENST00000541171 EPHA8P29322 1005 aaPredicted RBP24.68■■□□□ 1.54
LEMD3-203ENST00000541171 ACAP1Q15027 740 aa24.68■■□□□ 1.54
LEMD3-203ENST00000541171 DLG2Q15700 870 aa24.68■■□□□ 1.54
LEMD3-203ENST00000541171 FAM46CQ5VWP2 391 aa24.68■■□□□ 1.54
LEMD3-203ENST00000541171 GBP6Q6ZN66 633 aa24.68■■□□□ 1.54
LEMD3-203ENST00000541171 TMPRSS12Q86WS5 348 aa24.68■■□□□ 1.54
LEMD3-203ENST00000541171 C1orf131Q8NDD1 294 aaKnown RBP24.68■■□□□ 1.54
LEMD3-203ENST00000541171 ALG14Q96F25 216 aa24.68■■□□□ 1.54
LEMD3-203ENST00000541171 PPP1R9BQ96SB3 815 aa24.68■■□□□ 1.54
LEMD3-203ENST00000541171 ASNSD1Q9NWL6 643 aa24.68■■□□□ 1.54
LEMD3-203ENST00000541171 APEX2Q9UBZ4 518 aa24.68■■□□□ 1.54
LEMD3-203ENST00000541171 VPS28Q9UK41 221 aa24.68■■□□□ 1.54
LEMD3-203ENST00000541171 PCDHGA1Q9Y5H4 931 aa24.68■■□□□ 1.54
LEMD3-203ENST00000541171 HS3ST4Q9Y661 456 aa24.68■■□□□ 1.54
LEMD3-203ENST00000541171 LATO43561 262 aa24.67■■□□□ 1.54
LEMD3-203ENST00000541171 RFPL3O75679 317 aa24.67■■□□□ 1.54
LEMD3-203ENST00000541171 CNTN1Q12860 1018 aa24.67■■□□□ 1.54
LEMD3-203ENST00000541171 C11orf57Q6ZUT1 292 aaPredicted RBP24.67■■□□□ 1.54
LEMD3-203ENST00000541171 Q6ZVU0 165 aa24.67■■□□□ 1.54
LEMD3-203ENST00000541171 C14orf80Q86SX3 495 aa24.67■■□□□ 1.54
LEMD3-203ENST00000541171 SPATS2Q86XZ4 545 aaKnown RBP24.67■■□□□ 1.54
LEMD3-203ENST00000541171 FEM1AQ9BSK4 669 aa24.67■■□□□ 1.54
LEMD3-203ENST00000541171 SIK2Q9H0K1 926 aa24.67■■□□□ 1.54
LEMD3-203ENST00000541171 ARHGAP20Q9P2F6 1191 aa24.67■■□□□ 1.54
LEMD3-203ENST00000541171 PLRG1O43660 514 aaKnown RBP24.66■■□□□ 1.54
LEMD3-203ENST00000541171 ATP9BO43861 1147 aa24.66■■□□□ 1.54
LEMD3-203ENST00000541171 ERBB2P04626 1255 aa24.66■■□□□ 1.54
LEMD3-203ENST00000541171 EXOC3L4Q17RC7 722 aa24.66■■□□□ 1.54
LEMD3-203ENST00000541171 SOWAHCQ53LP3 525 aaPredicted RBP24.66■■□□□ 1.54
LEMD3-203ENST00000541171 MFSD2AQ8NA29 543 aa24.66■■□□□ 1.54
LEMD3-203ENST00000541171 PIP4K2CQ8TBX8 421 aa24.66■■□□□ 1.54
LEMD3-203ENST00000541171 SHC3Q92529 594 aa24.66■■□□□ 1.54
LEMD3-203ENST00000541171 NOX5Q96PH1 765 aa24.66■■□□□ 1.54
LEMD3-203ENST00000541171 SYNCQ9H7C4 482 aa24.66■■□□□ 1.54
LEMD3-203ENST00000541171 SCUBE2Q9NQ36 999 aa24.66■■□□□ 1.54
LEMD3-203ENST00000541171 RWDD2AQ9UIY3 292 aa24.66■■□□□ 1.54
LEMD3-203ENST00000541171 PCDHGC3Q9UN70 934 aa24.66■■□□□ 1.54
LEMD3-203ENST00000541171 C1QTNF3-AMACRE9PGA6 284 aa24.65■■□□□ 1.54
LEMD3-203ENST00000541171 M0QYT0 321 aa24.65■■□□□ 1.54
LEMD3-203ENST00000541171 SLC7A4O43246 635 aa24.65■■□□□ 1.54
LEMD3-203ENST00000541171 PAGE1O75459 146 aa24.65■■□□□ 1.54
LEMD3-203ENST00000541171 PTK2Q05397 1052 aa24.65■■□□□ 1.54
LEMD3-203ENST00000541171 STAT4Q14765 748 aa24.65■■□□□ 1.54
LEMD3-203ENST00000541171 OLFML1Q6UWY5 402 aa24.65■■□□□ 1.54
LEMD3-203ENST00000541171 OXR1Q8N573 874 aa24.65■■□□□ 1.54
LEMD3-203ENST00000541171 DCBLD2Q96PD2 775 aa24.65■■□□□ 1.54
LEMD3-203ENST00000541171 MUC3BQ9H195 1237 aa24.65■■□□□ 1.54
LEMD3-203ENST00000541171 KDM4CQ9H3R0 1056 aa24.65■■□□□ 1.54
LEMD3-203ENST00000541171 ERVMER34-1Q9H9K5 563 aa24.65■■□□□ 1.54
LEMD3-203ENST00000541171 PLCB1Q9NQ66 1216 aa24.65■■□□□ 1.54
LEMD3-203ENST00000541171 NYNRINQ9P2P1 1898 aaKnown RBP24.65■■□□□ 1.54
LEMD3-203ENST00000541171 PPM1HQ9ULR3 514 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms