RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 ACVRL1P37023 503 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 MMP13P45452 471 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 SESN2P58004 480 aaPredicted RBP12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 IHHQ14623 411 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 SMAD1Q15797 465 aaKnown RBP12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 FAM109BQ6ICB4 259 aaPredicted RBP12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 LRRC8BQ6P9F7 803 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 TRMT10BQ6PF06 316 aaKnown RBP12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 LEKR1Q6ZMV7 388 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 DENND1CQ8IV53 801 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 LGI2Q8N0V4 545 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 UMODL1-AS1Q8N2C9 162 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 ZNF276Q8N554 614 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 PDZD8Q8NEN9 1154 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 OR52K1Q8NGK4 314 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 ADAMTS19Q8TE59 1207 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 ARNTL2Q8WYA1 636 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 HERVK_113Q902F9 699 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 ARHGEF2Q92974 986 aaKnown RBP12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 PSMG2Q969U7 264 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 RPRD1AQ96P16 312 aaPredicted RBP12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 IL12RB2Q99665 862 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 SELENOSQ9BQE4 189 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 C17orf80Q9BSJ5 609 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 DHRS4Q9BTZ2 278 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 KLF16Q9BXK1 252 aaPredicted RBP12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 CAPS2Q9BXY5 557 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 LRRC3Q9BY71 257 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 UGT1A7Q9HAW7 530 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 UGT1A10Q9HAW8 530 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 UGT1A8Q9HAW9 530 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 EIF2B3Q9NR50 452 aaKnown RBP12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 SYBUQ9NX95 663 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 SMPD4Q9NXE4 827 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 PRKAG2Q9UGJ0 569 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 ZC3H7BQ9UGR2 993 aaKnown RBP12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 MYLKQ15746 1914 aa12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 FAM155BO75949 473 aa12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 CCNB1P14635 433 aa12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 ELF1P32519 619 aa12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 MDH1P40925 334 aaKnown RBP12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 CYP4F8P98187 520 aa12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 KBTBD12Q3ZCT8 623 aa12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 PLPP4Q5VZY2 271 aa12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 TXNDC8Q6A555 127 aa12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 GAREM2Q75VX8 874 aa12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 TMC7Q7Z402 723 aa12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 TMC8Q8IU68 726 aa12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 SLC22A17Q8WUG5 538 aa12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 DCAKDQ8WVC6 231 aa12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 PAFAH2Q99487 392 aa12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 RAD9AQ99638 391 aa12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 EBNA1BP2Q99848 306 aaKnown RBP12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 HTATIP2Q9BUP3 242 aa12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 SLC17A6Q9P2U8 582 aa12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 IPO11Q9UI26 975 aaKnown RBP12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 ACTL7AQ9Y615 435 aa12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 SLC4A7Q9Y6M7 1214 aa12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 DENND4CQ5VZ89 1909 aa12.54□□□□□ -0.4
AP003559.1-201ENST00000540906 A0A1W2PPM1 405 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 TTC24A2A3L6 582 aaPredicted RBP12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 ARHGAP42A6NI28 874 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 H3BNC9 293 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 MATN3O15232 486 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 TLL1O43897 1013 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 CACNG3O60359 315 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 CDH16O75309 829 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 GJB3O75712 270 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 AP2A1O95782 977 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 MT-CYBP00156 380 aaPredicted RBP12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 ATP2A2P16615 1042 aaKnown RBP12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 GJA1P17302 382 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 CAPN2P17655 700 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 CORO1AP31146 461 aaKnown RBP12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 CTNNB1P35222 781 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 IRS1P35568 1242 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 EPHB3P54753 998 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 RPS24P62847 133 aaKnown RBP12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 COG7P83436 770 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 STXBP5Q5T5C0 1151 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 NUGGCQ68CJ6 796 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 PSRC1Q6PGN9 363 aaPredicted RBP12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 KLHDC10Q6PID8 442 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 CES3Q6UWW8 571 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 LRRC31Q6UY01 552 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 MICALCLQ6ZW33 695 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 TDRPQ86YL5 185 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 LZTR1Q8N653 840 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 MZB1Q8WU39 189 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 TCF25Q9BQ70 676 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 FRMD8Q9BZ67 464 aaPredicted RBP12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 NACA2Q9H009 215 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 TRPC7Q9HCX4 862 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 AGO1Q9UL18 857 aaKnown RBP12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 MAD1L1Q9Y6D9 718 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 MYO7AQ13402 2215 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 CHD5Q8TDI0 1954 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 GBF1Q92538 1859 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 LINC01553A4QN01 128 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms