RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 GOLGA6CA6NDK9 693 aa25.12■■□□□ 1.61
TTC3-225ENST00000540756 F5H5T6 163 aa25.12■■□□□ 1.61
TTC3-225ENST00000540756 GOLGA6DP0CG33 693 aa25.12■■□□□ 1.61
TTC3-225ENST00000540756 CCNB1P14635 433 aa25.12■■□□□ 1.61
TTC3-225ENST00000540756 EPCAMP16422 314 aa25.12■■□□□ 1.61
TTC3-225ENST00000540756 TPSB2P20231 275 aa25.12■■□□□ 1.61
TTC3-225ENST00000540756 CCNCP24863 283 aa25.12■■□□□ 1.61
TTC3-225ENST00000540756 FDFT1P37268 417 aa25.12■■□□□ 1.61
TTC3-225ENST00000540756 CCR2P41597 374 aa25.12■■□□□ 1.61
TTC3-225ENST00000540756 SLC11A2P49281 568 aa25.12■■□□□ 1.61
TTC3-225ENST00000540756 PPARDQ03181 441 aa25.12■■□□□ 1.61
TTC3-225ENST00000540756 TPSAB1Q15661 275 aa25.12■■□□□ 1.61
TTC3-225ENST00000540756 ATP6V1G3Q96LB4 118 aa25.12■■□□□ 1.61
TTC3-225ENST00000540756 VPS37BQ9H9H4 285 aa25.12■■□□□ 1.61
TTC3-225ENST00000540756 GOLGA6AQ9NYA3 693 aa25.12■■□□□ 1.61
TTC3-225ENST00000540756 IGSF9Q9P2J2 1179 aa25.12■■□□□ 1.61
TTC3-225ENST00000540756 GOLGA6L10A6NI86 522 aa25.11■■□□□ 1.61
TTC3-225ENST00000540756 MYL4P12829 197 aa25.11■■□□□ 1.61
TTC3-225ENST00000540756 NFKB1P19838 968 aa25.11■■□□□ 1.61
TTC3-225ENST00000540756 LMAN1P49257 510 aa25.11■■□□□ 1.61
TTC3-225ENST00000540756 SMAD3P84022 425 aaKnown RBP25.11■■□□□ 1.61
TTC3-225ENST00000540756 PABPC1LQ4VXU2 614 aaKnown RBP25.11■■□□□ 1.61
TTC3-225ENST00000540756 DNAJC21Q5F1R6 531 aaKnown RBP25.11■■□□□ 1.61
TTC3-225ENST00000540756 CEP128Q6ZU80 1094 aa25.11■■□□□ 1.61
TTC3-225ENST00000540756 OTOP3Q7RTS5 596 aa25.11■■□□□ 1.61
TTC3-225ENST00000540756 MPP5Q8N3R9 675 aa25.11■■□□□ 1.61
TTC3-225ENST00000540756 OR52K2Q8NGK3 314 aa25.11■■□□□ 1.61
TTC3-225ENST00000540756 TEKT5Q96M29 485 aa25.11■■□□□ 1.61
TTC3-225ENST00000540756 TRIM56Q9BRZ2 755 aaKnown RBP25.11■■□□□ 1.61
TTC3-225ENST00000540756 ATXN3LQ9H3M9 355 aa25.11■■□□□ 1.61
TTC3-225ENST00000540756 MAN1C1Q9NR34 630 aa25.11■■□□□ 1.61
TTC3-225ENST00000540756 CTNNAL1Q9UBT7 734 aa25.11■■□□□ 1.61
TTC3-225ENST00000540756 IPO11Q9UI26 975 aaKnown RBP25.11■■□□□ 1.61
TTC3-225ENST00000540756 TEX264Q9Y6I9 313 aa25.11■■□□□ 1.61
TTC3-225ENST00000540756 RASA4BC9J798 803 aa25.1■■□□□ 1.61
TTC3-225ENST00000540756 J3KR12 359 aa25.1■■□□□ 1.61
TTC3-225ENST00000540756 RASA4O43374 803 aa25.1■■□□□ 1.61
TTC3-225ENST00000540756 TSPAN3O60637 253 aa25.1■■□□□ 1.61
TTC3-225ENST00000540756 OLFM2O95897 454 aa25.1■■□□□ 1.61
TTC3-225ENST00000540756 OR1E1P30953 314 aa25.1■■□□□ 1.61
TTC3-225ENST00000540756 PPM1LQ5SGD2 360 aa25.1■■□□□ 1.61
TTC3-225ENST00000540756 MCUQ8NE86 351 aa25.1■■□□□ 1.61
TTC3-225ENST00000540756 UBP1Q9NZI7 540 aa25.1■■□□□ 1.61
TTC3-225ENST00000540756 RSPH14Q9UHP6 348 aa25.1■■□□□ 1.61
TTC3-225ENST00000540756 CPQQ9Y646 472 aa25.1■■□□□ 1.61
TTC3-225ENST00000540756 UBE3AQ05086 875 aa25.1■■□□□ 1.61
TTC3-225ENST00000540756 TTLL3Q9Y4R7 772 aa25.1■■□□□ 1.61
TTC3-225ENST00000540756 RASGRF2O14827 1237 aa25.09■■□□□ 1.61
TTC3-225ENST00000540756 MATN3O15232 486 aa25.09■■□□□ 1.61
TTC3-225ENST00000540756 MTSS1O43312 755 aa25.09■■□□□ 1.61
TTC3-225ENST00000540756 GREM1O60565 184 aa25.09■■□□□ 1.61
TTC3-225ENST00000540756 PEX11BO96011 259 aa25.09■■□□□ 1.61
TTC3-225ENST00000540756 ACVRL1P37023 503 aa25.09■■□□□ 1.61
TTC3-225ENST00000540756 MAGEA3P43357 314 aa25.09■■□□□ 1.61
TTC3-225ENST00000540756 NDST2P52849 883 aa25.09■■□□□ 1.61
TTC3-225ENST00000540756 RBM23Q86U06 439 aaKnown RBP25.09■■□□□ 1.61
TTC3-225ENST00000540756 MLPHQ9BV36 600 aaPredicted RBP25.09■■□□□ 1.61
TTC3-225ENST00000540756 PHACTR1Q9C0D0 580 aa25.09■■□□□ 1.61
TTC3-225ENST00000540756 SMG9Q9H0W8 520 aaKnown RBP25.09■■□□□ 1.61
TTC3-225ENST00000540756 GBA3Q9H227 469 aa25.09■■□□□ 1.61
TTC3-225ENST00000540756 NOVA2Q9UNW9 492 aaKnown RBP25.09■■□□□ 1.61
TTC3-225ENST00000540756 NOTCH4Q99466 2003 aa25.09■■□□□ 1.61
TTC3-225ENST00000540756 FOXO6A8MYZ6 492 aa25.08■■□□□ 1.61
TTC3-225ENST00000540756 EIF3HO15372 352 aaKnown RBP eCLIP25.08■■□□□ 1.612e-6■■□□□ 12.7
TTC3-225ENST00000540756 CLASP2O75122 1294 aaKnown RBP25.08■■□□□ 1.61
TTC3-225ENST00000540756 USP12O75317 370 aa25.08■■□□□ 1.61
TTC3-225ENST00000540756 C5orf22Q49AR2 442 aa25.08■■□□□ 1.61
TTC3-225ENST00000540756 ZNF697Q5TEC3 545 aa25.08■■□□□ 1.61
TTC3-225ENST00000540756 PPP1R21Q6ZMI0 780 aa25.08■■□□□ 1.61
TTC3-225ENST00000540756 LEKR1Q6ZMV7 388 aa25.08■■□□□ 1.61
TTC3-225ENST00000540756 TCEAL4Q96EI5 215 aa25.08■■□□□ 1.61
TTC3-225ENST00000540756 TTC25Q96NG3 672 aa25.08■■□□□ 1.61
TTC3-225ENST00000540756 TMEM109Q9BVC6 243 aa25.08■■□□□ 1.61
TTC3-225ENST00000540756 MYO9BQ13459 2157 aa25.08■■□□□ 1.61
TTC3-225ENST00000540756 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.08■■□□□ 1.61
TTC3-225ENST00000540756 A0A0D9SEW6 157 aa25.08■■□□□ 1.61
TTC3-225ENST00000540756 ARHGAP42A6NI28 874 aa25.08■■□□□ 1.61
TTC3-225ENST00000540756 H3BNC9 293 aa25.08■■□□□ 1.61
TTC3-225ENST00000540756 IFI35P80217 286 aaPredicted RBP25.08■■□□□ 1.61
TTC3-225ENST00000540756 ZNF33AQ06730 810 aa25.08■■□□□ 1.61
TTC3-225ENST00000540756 ADGRF1Q5T601 910 aa25.08■■□□□ 1.61
TTC3-225ENST00000540756 C3orf62Q6ZUJ4 267 aa25.08■■□□□ 1.61
TTC3-225ENST00000540756 ELMOD1Q8N336 334 aa25.08■■□□□ 1.61
TTC3-225ENST00000540756 MRPS31Q92665 395 aaKnown RBP25.08■■□□□ 1.61
TTC3-225ENST00000540756 TGS1Q96RS0 853 aaKnown RBP25.08■■□□□ 1.61
TTC3-225ENST00000540756 IL12RB2Q99665 862 aa25.08■■□□□ 1.61
TTC3-225ENST00000540756 PLAC1Q9HBJ0 212 aa25.08■■□□□ 1.61
TTC3-225ENST00000540756 TRHDEQ9UKU6 1024 aa25.08■■□□□ 1.61
TTC3-225ENST00000540756 RB1P06400 928 aa25.07■■□□□ 1.6
TTC3-225ENST00000540756 ABHD2P08910 425 aa25.07■■□□□ 1.6
TTC3-225ENST00000540756 CRADDP78560 199 aa25.07■■□□□ 1.6
TTC3-225ENST00000540756 GPM6BQ13491 265 aa25.07■■□□□ 1.6
TTC3-225ENST00000540756 EFTUD2Q15029 972 aaKnown RBP eCLIP25.07■■□□□ 1.69e-8■■■■□ 21.4
TTC3-225ENST00000540756 POLD3Q15054 466 aaPredicted RBP25.07■■□□□ 1.6
TTC3-225ENST00000540756 CCDC38Q502W7 563 aa25.07■■□□□ 1.6
TTC3-225ENST00000540756 ZNF354CQ86Y25 554 aa25.07■■□□□ 1.6
TTC3-225ENST00000540756 PALM2Q8IXS6 379 aa25.07■■□□□ 1.6
TTC3-225ENST00000540756 SPATA22Q8NHS9 363 aa25.07■■□□□ 1.6
TTC3-225ENST00000540756 OXNAD1Q96HP4 312 aaPredicted RBP25.07■■□□□ 1.6
TTC3-225ENST00000540756 ASAH2Q9NR71 780 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms