RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 F8W810 466 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 PPP1R12AO14974 1030 aaPredicted RBP13.95□□□□□ -0.18
BNIP3-202ENST00000540159 OPHN1O60890 802 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 C2P06681 752 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 KYAT3Q6YP21 454 aaKnown RBP13.95□□□□□ -0.18
BNIP3-202ENST00000540159 STRADAQ7RTN6 431 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 CRYBG2Q8N1P7 616 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.95□□□□□ -0.18
BNIP3-202ENST00000540159 SPDYE1Q8NFV5 336 aaPredicted RBP13.95□□□□□ -0.18
BNIP3-202ENST00000540159 BRI3BPQ8WY22 251 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 STAP1Q9ULZ2 295 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 TTC24A2A3L6 582 aaPredicted RBP13.95□□□□□ -0.18
BNIP3-202ENST00000540159 CCL22O00626 93 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 PTGESO14684 152 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 XPO1O14980 1071 aaKnown RBP13.95□□□□□ -0.18
BNIP3-202ENST00000540159 FAM200BP0CF97 657 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 CYP2B6P20813 491 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 NOS2P35228 1153 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 ADRA1BP35368 520 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 CPOXP36551 454 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 PKNOX1P55347 436 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 PCSK7Q16549 785 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 OLFML2BQ68BL8 750 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 RNF111Q6ZNA4 994 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 KCNMB4Q86W47 210 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 ZDHHC17Q8IUH5 632 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 FAM156AQ8NDB6 213 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 MLPHQ9BV36 600 aaPredicted RBP13.95□□□□□ -0.18
BNIP3-202ENST00000540159 ZCWPW1Q9H0M4 648 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 EBF3Q9H4W6 596 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 PLEKHA5Q9HAU0 1116 aa13.95□□□□□ -0.18
BNIP3-202ENST00000540159 STX16-NPEPL1H3BU86 382 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 MSI1O43347 362 aaKnown RBP13.94□□□□□ -0.18
BNIP3-202ENST00000540159 PEX2P28328 305 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 CXCR3P49682 368 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 NAGLUP54802 743 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 MPP1Q00013 466 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 GRM3Q14832 879 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 PTAR1Q7Z6K3 402 aaPredicted RBP13.94□□□□□ -0.18
BNIP3-202ENST00000540159 TLK2Q86UE8 772 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 TTC39CQ8N584 583 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 SMG8Q8ND04 991 aaKnown RBP13.94□□□□□ -0.18
BNIP3-202ENST00000540159 SCAMP5Q8TAC9 235 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 KCTD4Q8WVF5 259 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 SENP8Q96LD8 212 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 ZNF560Q96MR9 790 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 NPY6RQ99463 290 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 OR12D3Q9UGF7 316 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 LRCH1Q9Y2L9 728 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 NEMP2A6NFY4 417 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 A6NHS1 94 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 PMPCBO75439 489 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 POMCP01189 267 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 YBX3P16989 372 aaKnown RBP eCLIP13.94□□□□□ -0.181e-7■□□□□ 9.6
BNIP3-202ENST00000540159 BDNFP23560 247 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 NUDT2P50583 147 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 PLK1P53350 603 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 ACTR3P61158 418 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 MPP3Q13368 585 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 SEPT6Q14141 434 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 KYAT1Q16773 422 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 ANKRD20A4Q4UJ75 823 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 RABGAP1LQ5R372 815 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 ALKAL1Q6UXT8 129 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 SLC41A1Q8IVJ1 513 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 CATSPER2Q96P56 530 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 SMOQ99835 787 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 FERMT1Q9BQL6 677 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 MIOSQ9NXC5 875 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 FLRT1Q9NZU1 646 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 DCDC2Q9UHG0 476 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 ACADSBP45954 432 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 AP2B1P63010 937 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 TBL3Q12788 808 aaKnown RBP13.94□□□□□ -0.18
BNIP3-202ENST00000540159 MFSD10Q14728 455 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 GRAMD1BQ3KR37 738 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 UBXN11Q5T124 520 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 TDRD5Q8NAT2 981 aaKnown RBP13.94□□□□□ -0.18
BNIP3-202ENST00000540159 TTC16Q8NEE8 873 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 URGCPQ8TCY9 931 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 VPS39Q96JC1 886 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 HSFY1Q96LI6 401 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 LENG8Q96PV6 779 aaPredicted RBP13.94□□□□□ -0.18
BNIP3-202ENST00000540159 TUBGCP5Q96RT8 1024 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 WDCPQ9H6R7 721 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 CYP4F12Q9HCS2 524 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 SLC2A6Q9UGQ3 507 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 SCOCQ9UIL1 159 aa13.94□□□□□ -0.18
BNIP3-202ENST00000540159 LOC285556D6RIA3 1793 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 BIRC5O15392 142 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 KIF1CO43896 1103 aaKnown RBP13.93□□□□□ -0.18
BNIP3-202ENST00000540159 ALDH1A2O94788 518 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 LRIG2O94898 1065 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 VAPBO95292 243 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 STAU1O95793 577 aaKnown RBP13.93□□□□□ -0.18
BNIP3-202ENST00000540159 CD4P01730 458 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 TSPAN8P19075 237 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 CHRNA4P43681 627 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 PGFP49763 221 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 SCNN1GP51170 649 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms