RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 UBL7Q96S82 380 aaPredicted RBP15.44■□□□□ 0.06
USB1-203ENST00000539737 STK33Q9BYT3 514 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 NUCKS1Q9H1E3 243 aaKnown RBP15.44■□□□□ 0.06
USB1-203ENST00000539737 TSPY26PQ9H489 355 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 SGK2Q9HBY8 427 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 OSGEPQ9NPF4 335 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 CNGB3Q9NQW8 809 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 ABCC13Q9NSE7 274 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 SLCO3A1Q9UIG8 710 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 COL5A1P20908 1838 aaPredicted RBP15.43■□□□□ 0.06
USB1-203ENST00000539737 F8VZ95 297 aa15.43■□□□□ 0.06
USB1-203ENST00000539737 SERPINC1P01008 464 aa15.43■□□□□ 0.06
USB1-203ENST00000539737 PLA2G2AP14555 144 aa15.43■□□□□ 0.06
USB1-203ENST00000539737 MAT2AP31153 395 aaKnown RBP15.43■□□□□ 0.06
USB1-203ENST00000539737 DAOAP59103 153 aa15.43■□□□□ 0.06
USB1-203ENST00000539737 ZNF445P59923 1031 aa15.43■□□□□ 0.06
USB1-203ENST00000539737 POLR2FP61218 127 aaKnown RBP15.43■□□□□ 0.06
USB1-203ENST00000539737 RACK1P63244 317 aaKnown RBP15.43■□□□□ 0.06
USB1-203ENST00000539737 CST6Q15828 149 aa15.43■□□□□ 0.06
USB1-203ENST00000539737 C9orf64Q5T6V5 341 aa15.43■□□□□ 0.06
USB1-203ENST00000539737 FBXL19Q6PCT2 694 aa15.43■□□□□ 0.06
USB1-203ENST00000539737 CIR1Q86X95 450 aaPredicted RBP15.43■□□□□ 0.06
USB1-203ENST00000539737 MFN1Q8IWA4 741 aa15.43■□□□□ 0.06
USB1-203ENST00000539737 APCDD1Q8J025 514 aa15.43■□□□□ 0.06
USB1-203ENST00000539737 STK40Q8N2I9 435 aa15.43■□□□□ 0.06
USB1-203ENST00000539737 ZNF606Q8WXB4 792 aa15.43■□□□□ 0.06
USB1-203ENST00000539737 NXPE2Q96DL1 559 aa15.43■□□□□ 0.06
USB1-203ENST00000539737 RPL10LQ96L21 214 aaKnown RBP15.43■□□□□ 0.06
USB1-203ENST00000539737 HSFY1Q96LI6 401 aa15.43■□□□□ 0.06
USB1-203ENST00000539737 MYOCQ99972 504 aa15.43■□□□□ 0.06
USB1-203ENST00000539737 HBS1LQ9Y450 684 aaKnown RBP15.43■□□□□ 0.06
USB1-203ENST00000539737 MAST4O15021 2626 aa15.42■□□□□ 0.06
USB1-203ENST00000539737 A0A1B0GTH6 734 aa15.42■□□□□ 0.06
USB1-203ENST00000539737 FOXN3O00409 490 aaPredicted RBP15.42■□□□□ 0.06
USB1-203ENST00000539737 BRINP1O60477 761 aa15.42■□□□□ 0.06
USB1-203ENST00000539737 MOCS2O96007 188 aaPredicted RBP15.42■□□□□ 0.06
USB1-203ENST00000539737 EPHA8P29322 1005 aaPredicted RBP15.42■□□□□ 0.06
USB1-203ENST00000539737 KLK7P49862 253 aa15.42■□□□□ 0.06
USB1-203ENST00000539737 C19orf57Q0VDD7 668 aa15.42■□□□□ 0.06
USB1-203ENST00000539737 TMPRSS12Q86WS5 348 aa15.42■□□□□ 0.06
USB1-203ENST00000539737 SCML4Q8N228 414 aa15.42■□□□□ 0.06
USB1-203ENST00000539737 ZNF843Q8N446 348 aa15.42■□□□□ 0.06
USB1-203ENST00000539737 SLC35F5Q8WV83 523 aa15.42■□□□□ 0.06
USB1-203ENST00000539737 SPAG5Q96R06 1193 aa15.42■□□□□ 0.06
USB1-203ENST00000539737 RTN4Q9NQC3 1192 aaKnown RBP15.42■□□□□ 0.06
USB1-203ENST00000539737 STOML2Q9UJZ1 356 aa15.42■□□□□ 0.06
USB1-203ENST00000539737 PCDHGC3Q9UN70 934 aa15.42■□□□□ 0.06
USB1-203ENST00000539737 CEP83Q9Y592 693 aa15.42■□□□□ 0.06
USB1-203ENST00000539737 PCDHB1Q9Y5F3 818 aa15.42■□□□□ 0.06
USB1-203ENST00000539737 TDRD6O60522 2096 aaKnown RBP15.41■□□□□ 0.06
USB1-203ENST00000539737 A0A1W2PQC6 194 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 ATXN7O15265 892 aaPredicted RBP15.41■□□□□ 0.06
USB1-203ENST00000539737 SART1O43290 800 aaKnown RBP15.41■□□□□ 0.06
USB1-203ENST00000539737 ACSL4O60488 711 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 FBXO21O94952 628 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 IGLV3-27P01718 113 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 ATP5BP06576 529 aaKnown RBP15.41■□□□□ 0.06
USB1-203ENST00000539737 PNMA6AP0CW24 399 aaPredicted RBP15.41■□□□□ 0.06
USB1-203ENST00000539737 CD38P28907 300 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 SLC8A1P32418 973 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 CLCN1P35523 988 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 ACADSBP45954 432 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 ADPRHP54922 357 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 HNRNPA1L2Q32P51 320 aaKnown RBP15.41■□□□□ 0.06
USB1-203ENST00000539737 PITRM1Q5JRX3 1037 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 C6orf118Q5T5N4 469 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 PMF1Q6P1K2 205 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 SLC47A2Q86VL8 602 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 OR14C36Q8NHC7 312 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 STK32AQ8WU08 396 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 IRGQQ8WZA9 623 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 SERAC1Q96JX3 654 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 NOX5Q96PH1 765 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 FAM129BQ96TA1 746 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 OMDQ99983 421 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.41■□□□□ 0.06
USB1-203ENST00000539737 TRIM62Q9BVG3 475 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 MIS12Q9H081 205 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 ACP6Q9NPH0 428 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 ERVW-1Q9UQF0 538 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 NCKAP1Q9Y2A7 1128 aa15.41■□□□□ 0.06
USB1-203ENST00000539737 TYW5A2RUC4 315 aaKnown RBP15.4■□□□□ 0.06
USB1-203ENST00000539737 EPHB6O15197 1021 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 PAPSS1O43252 624 aaPredicted RBP15.4■□□□□ 0.06
USB1-203ENST00000539737 RTN2O75298 545 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 LATS1O95835 1130 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 C7P10643 843 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 KRT9P35527 623 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 STAT1P42224 750 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 GPD2P43304 727 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 SLC11A2P49281 568 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 TBX4P57082 545 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 JAM2P57087 298 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 NXPH1P58417 271 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 PITX1P78337 314 aaPredicted RBP15.4■□□□□ 0.06
USB1-203ENST00000539737 ZBTB16Q05516 673 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 DENND1BQ6P3S1 775 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 KDM7AQ6ZMT4 941 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 KANSL1Q7Z3B3 1105 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 CCDC117Q8IWD4 279 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms