RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 NAT9Q9BTE0 207 aa20.74■□□□□ 0.91
PACSIN3-211ENST00000539589 SMYD2Q9NRG4 433 aa20.74■□□□□ 0.91
PACSIN3-211ENST00000539589 MSI1O43347 362 aaKnown RBP20.73■□□□□ 0.91
PACSIN3-211ENST00000539589 ALADP13716 330 aa20.73■□□□□ 0.91
PACSIN3-211ENST00000539589 YWHAQP27348 245 aa20.73■□□□□ 0.91
PACSIN3-211ENST00000539589 GALNT2Q10471 571 aa20.73■□□□□ 0.91
PACSIN3-211ENST00000539589 RASIP1Q5U651 963 aa20.73■□□□□ 0.91
PACSIN3-211ENST00000539589 TRMT10BQ6PF06 316 aaKnown RBP20.73■□□□□ 0.91
PACSIN3-211ENST00000539589 ZNF75CPQ92670 426 aaPredicted RBP20.73■□□□□ 0.91
PACSIN3-211ENST00000539589 HDAC11Q96DB2 347 aa20.73■□□□□ 0.91
PACSIN3-211ENST00000539589 SMOC2Q9H3U7 446 aa20.73■□□□□ 0.91
PACSIN3-211ENST00000539589 MOCS1Q9NZB8 636 aa20.73■□□□□ 0.91
PACSIN3-211ENST00000539589 GSTA1P08263 222 aa20.73■□□□□ 0.91
PACSIN3-211ENST00000539589 NEK3P51956 506 aa20.73■□□□□ 0.91
PACSIN3-211ENST00000539589 TAF10Q12962 218 aa20.73■□□□□ 0.91
PACSIN3-211ENST00000539589 GBP7Q8N8V2 638 aaPredicted RBP20.73■□□□□ 0.91
PACSIN3-211ENST00000539589 CCDC63Q8NA47 563 aa20.73■□□□□ 0.91
PACSIN3-211ENST00000539589 SPOCK2Q92563 424 aa20.73■□□□□ 0.91
PACSIN3-211ENST00000539589 FBXO32Q969P5 355 aa20.73■□□□□ 0.91
PACSIN3-211ENST00000539589 TRIM56Q9BRZ2 755 aaKnown RBP20.73■□□□□ 0.91
PACSIN3-211ENST00000539589 ABCF3Q9NUQ8 709 aa20.73■□□□□ 0.91
PACSIN3-211ENST00000539589 SLC17A7Q9P2U7 560 aa20.73■□□□□ 0.91
PACSIN3-211ENST00000539589 AFF4Q9UHB7 1163 aaKnown RBP20.73■□□□□ 0.91
PACSIN3-211ENST00000539589 TRHDEQ9UKU6 1024 aa20.73■□□□□ 0.91
PACSIN3-211ENST00000539589 SLC38A8A6NNN8 435 aa20.72■□□□□ 0.91
PACSIN3-211ENST00000539589 EDF1O60869 148 aaKnown RBP20.72■□□□□ 0.91
PACSIN3-211ENST00000539589 ALDH1A2O94788 518 aa20.72■□□□□ 0.91
PACSIN3-211ENST00000539589 RTN3O95197 1032 aaPredicted RBP20.72■□□□□ 0.91
PACSIN3-211ENST00000539589 PGAM1P18669 254 aa20.72■□□□□ 0.91
PACSIN3-211ENST00000539589 DNAJB2P25686 324 aa20.72■□□□□ 0.91
PACSIN3-211ENST00000539589 GARSP41250 739 aaKnown RBP20.72■□□□□ 0.91
PACSIN3-211ENST00000539589 SERPINB9P50453 376 aa20.72■□□□□ 0.91
PACSIN3-211ENST00000539589 SESN2P58004 480 aaPredicted RBP20.72■□□□□ 0.91
PACSIN3-211ENST00000539589 BRMS1LQ5PSV4 323 aa20.72■□□□□ 0.91
PACSIN3-211ENST00000539589 RNF43Q68DV7 783 aa20.72■□□□□ 0.91
PACSIN3-211ENST00000539589 ZNF461Q8TAF7 563 aa20.72■□□□□ 0.91
PACSIN3-211ENST00000539589 DEPDC1BQ8WUY9 529 aa20.72■□□□□ 0.91
PACSIN3-211ENST00000539589 ARHGEF38Q9NXL2 777 aa20.72■□□□□ 0.91
PACSIN3-211ENST00000539589 CHD7Q9P2D1 2997 aa20.72■□□□□ 0.91
PACSIN3-211ENST00000539589 LILRB3O75022 631 aa20.71■□□□□ 0.91
PACSIN3-211ENST00000539589 CSH1P0DML2 217 aa20.71■□□□□ 0.91
PACSIN3-211ENST00000539589 CSH2P0DML3 217 aa20.71■□□□□ 0.91
PACSIN3-211ENST00000539589 MGAT1P26572 445 aa20.71■□□□□ 0.91
PACSIN3-211ENST00000539589 RPL10AP62906 217 aaKnown RBP20.71■□□□□ 0.91
PACSIN3-211ENST00000539589 FIBCD1Q8N539 461 aa20.71■□□□□ 0.91
PACSIN3-211ENST00000539589 TTC17Q96AE7 1141 aa20.71■□□□□ 0.91
PACSIN3-211ENST00000539589 HAPLN3Q96S86 360 aa20.71■□□□□ 0.91
PACSIN3-211ENST00000539589 VAT1Q99536 393 aa20.71■□□□□ 0.91
PACSIN3-211ENST00000539589 IQCGQ9H095 443 aaKnown RBP20.71■□□□□ 0.91
PACSIN3-211ENST00000539589 SLCO1B3Q9NPD5 702 aa20.71■□□□□ 0.91
PACSIN3-211ENST00000539589 HAUS2Q9NVX0 235 aa20.71■□□□□ 0.91
PACSIN3-211ENST00000539589 LCHNA4D1U4 455 aa20.71■□□□□ 0.91
PACSIN3-211ENST00000539589 COPEO14579 308 aa20.71■□□□□ 0.91
PACSIN3-211ENST00000539589 FGF18O76093 207 aa20.71■□□□□ 0.91
PACSIN3-211ENST00000539589 TTC31Q49AM3 519 aaPredicted RBP20.71■□□□□ 0.91
PACSIN3-211ENST00000539589 ITPRIPL1Q6GPH6 555 aa20.71■□□□□ 0.91
PACSIN3-211ENST00000539589 MSANTD2Q6P1R3 559 aa20.71■□□□□ 0.91
PACSIN3-211ENST00000539589 CDKL2Q92772 493 aa20.71■□□□□ 0.91
PACSIN3-211ENST00000539589 OXNAD1Q96HP4 312 aaPredicted RBP20.71■□□□□ 0.91
PACSIN3-211ENST00000539589 SLC12A4Q9UP95 1085 aa20.71■□□□□ 0.91
PACSIN3-211ENST00000539589 WDR91A4D1P6 747 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 UGT1A9O60656 530 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 TBX18O95935 607 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 URODP06132 367 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 DHRS4L1P0CG22 281 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 CNTFP26441 200 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 CCR1P32246 355 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 CRADDP78560 199 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 COG7P83436 770 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 ARTNQ5T4W7 220 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 RWDD4Q6NW29 188 aaKnown RBP20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 PSRC1Q6PGN9 363 aaPredicted RBP20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 ARNTL2Q8WYA1 636 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 CLP1Q92989 425 aaKnown RBP20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 ZBED2Q9BTP6 218 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 TTLL2Q9BWV7 592 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 UGT1A7Q9HAW7 530 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 UGT1A10Q9HAW8 530 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 UGT1A8Q9HAW9 530 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 INSL6Q9Y581 213 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 PCDHB12Q9Y5F1 795 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 ANAPC1Q9H1A4 1944 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 ERI2A8K979 691 aaKnown RBP20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 AP2A1O95782 977 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 ZDHHC11BP0C7U3 371 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 SRGAP2BP0DMP2 458 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 HTR7P34969 479 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 PPM1AP35813 382 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 RAB33AQ14088 237 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 TEX44Q53QW1 395 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 HERC6Q8IVU3 1022 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 ZNF276Q8N554 614 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 HERVK_113Q902F9 699 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 FAM111AQ96PZ2 611 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 SIK2Q9H0K1 926 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 GBA3Q9H227 469 aa20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 C12orf65Q9H3J6 166 aaKnown RBP20.7■□□□□ 0.9
PACSIN3-211ENST00000539589 MANSC1Q9H8J5 431 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms