RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 OSGEPQ9NPF4 335 aa11.88□□□□□ -0.51
RTN3-209ENST00000538995 DNAAF2Q9NVR5 837 aaKnown RBP11.88□□□□□ -0.51
RTN3-209ENST00000538995 PPARGC1AQ9UBK2 798 aaKnown RBP11.88□□□□□ -0.51
RTN3-209ENST00000538995 ADAMTS1Q9UHI8 967 aa11.88□□□□□ -0.51
RTN3-209ENST00000538995 SLCO3A1Q9UIG8 710 aa11.88□□□□□ -0.51
RTN3-209ENST00000538995 TPX2Q9ULW0 747 aaKnown RBP11.88□□□□□ -0.51
RTN3-209ENST00000538995 HS3ST2Q9Y278 367 aa11.88□□□□□ -0.51
RTN3-209ENST00000538995 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.88□□□□□ -0.51
RTN3-209ENST00000538995 CACNA1EQ15878 2313 aa11.88□□□□□ -0.51
RTN3-209ENST00000538995 A0A1B0GTH6 734 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 ALOX15BO15296 676 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 BCAT2O15382 392 aaPredicted RBP11.87□□□□□ -0.51
RTN3-209ENST00000538995 TEX33O43247 280 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 CNTN5O94779 1100 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 KCNK5O95279 499 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 C5AR1P21730 350 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 MAPK8P45983 427 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 CLCN6P51797 869 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 TPM4P67936 248 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 ATP11AP98196 1134 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 SLC14A1Q13336 389 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 IQCB1Q15051 598 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 CCDC14Q49A88 953 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 MMAAQ8IVH4 418 aaKnown RBP11.87□□□□□ -0.51
RTN3-209ENST00000538995 HDDC3Q8N4P3 179 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 ZCCHC9Q8N567 271 aaKnown RBP11.87□□□□□ -0.51
RTN3-209ENST00000538995 MINDY1Q8N5J2 469 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 OR52K2Q8NGK3 314 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 C1orf216Q8TAB5 229 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 RXFP2Q8WXD0 754 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 BAP1Q92560 729 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 CENPIQ92674 756 aaPredicted RBP11.87□□□□□ -0.51
RTN3-209ENST00000538995 FAM129BQ96TA1 746 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 SYT11Q9BT88 431 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 SELENOOQ9BVL4 669 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 ZYG11BQ9C0D3 744 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 MTG2Q9H4K7 406 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 C6orf106Q9H6K1 298 aaPredicted RBP11.87□□□□□ -0.51
RTN3-209ENST00000538995 SEPT11Q9NVA2 429 aaKnown RBP11.87□□□□□ -0.51
RTN3-209ENST00000538995 FBXL12Q9NXK8 326 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 ZNF212Q9UDV6 495 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 PCDH15Q96QU1 1955 aa11.87□□□□□ -0.51
RTN3-209ENST00000538995 CXorf51AA0A1B0GTR3 108 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 TCRBV5S1A1TA0A578 114 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 FAM170AA1A519 330 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 ILVBLA1L0T0 632 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 ANKRD62A6NC57 917 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 LRRC72A6NJI9 287 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 SIGLEC16A6NMB1 481 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 MID1O15344 667 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 OPHN1O60890 802 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 CEACAM1P13688 526 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 MAOBP27338 520 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 OR1E1P30953 314 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 SLC8A1P32418 973 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 ADRA1BP35368 520 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 PSMD8P48556 350 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 NOVA1P51513 510 aaKnown RBP11.86□□□□□ -0.51
RTN3-209ENST00000538995 AFF3P51826 1226 aaKnown RBP11.86□□□□□ -0.51
RTN3-209ENST00000538995 SCAPQ12770 1279 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 GRIK2Q13002 908 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 SEMA3BQ13214 749 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 ARTNQ5T4W7 220 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 MANEALQ5VSG8 457 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 PSAPL1Q6NUJ1 521 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 DNAJC24Q6P3W2 148 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 IL27RAQ6UWB1 636 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 IRF2BP2Q7Z5L9 587 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 STK40Q8N2I9 435 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 SH2D3CQ8N5H7 860 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 JOSD2Q8TAC2 188 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 GANCQ8TET4 914 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 OR8D1Q8WZ84 308 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 NTAN1Q96AB6 310 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 FAM131CQ96AQ9 280 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 VCPIP1Q96JH7 1222 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 CCDC114Q96M63 670 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 PSMB7Q99436 277 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 OMDQ99983 421 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 GTPBP2Q9BX10 602 aaKnown RBP11.86□□□□□ -0.51
RTN3-209ENST00000538995 EDEM3Q9BZQ6 932 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 MIR1-1HGQ9H1L0 117 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 OSBPL2Q9H1P3 480 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 TMPRSS4Q9NRS4 437 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 EIF2B4Q9UI10 523 aaKnown RBP11.86□□□□□ -0.51
RTN3-209ENST00000538995 SNX10Q9Y5X0 201 aa11.86□□□□□ -0.51
RTN3-209ENST00000538995 CEP295Q9C0D2 2601 aa11.85□□□□□ -0.51
RTN3-209ENST00000538995 A0A1W2PP55 124 aa11.85□□□□□ -0.51
RTN3-209ENST00000538995 SYCE3A1L190 88 aa11.85□□□□□ -0.51
RTN3-209ENST00000538995 LRRC53A6NM62 1247 aa11.85□□□□□ -0.51
RTN3-209ENST00000538995 C10orf142B7Z368 130 aa11.85□□□□□ -0.51
RTN3-209ENST00000538995 C1QTNF3-AMACRE9PGA6 284 aa11.85□□□□□ -0.51
RTN3-209ENST00000538995 SLC7A4O43246 635 aa11.85□□□□□ -0.51
RTN3-209ENST00000538995 RNASEH2AO75792 299 aaKnown RBP11.85□□□□□ -0.51
RTN3-209ENST00000538995 CER1O95813 267 aa11.85□□□□□ -0.51
RTN3-209ENST00000538995 GOT1P17174 413 aa11.85□□□□□ -0.51
RTN3-209ENST00000538995 DESP17661 470 aa11.85□□□□□ -0.51
RTN3-209ENST00000538995 GPD1P21695 349 aa11.85□□□□□ -0.51
RTN3-209ENST00000538995 CD27P26842 260 aa11.85□□□□□ -0.51
RTN3-209ENST00000538995 RFC1P35251 1148 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms