RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 NOD1Q9Y239 953 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 PAGE1O75459 146 aa14.31□□□□□ -0.12
LIMK1-208ENST00000538333 OR4Q2P0C623 313 aa14.31□□□□□ -0.12
LIMK1-208ENST00000538333 CCNCP24863 283 aa14.31□□□□□ -0.12
LIMK1-208ENST00000538333 HTR7P34969 479 aa14.31□□□□□ -0.12
LIMK1-208ENST00000538333 GRIK1P39086 918 aa14.31□□□□□ -0.12
LIMK1-208ENST00000538333 NPY2RP49146 381 aa14.31□□□□□ -0.12
LIMK1-208ENST00000538333 PDE1BQ01064 536 aa14.31□□□□□ -0.12
LIMK1-208ENST00000538333 INSCQ1MX18 579 aa14.31□□□□□ -0.12
LIMK1-208ENST00000538333 PREPLQ4J6C6 727 aaPredicted RBP14.31□□□□□ -0.12
LIMK1-208ENST00000538333 FASTKD1Q53R41 847 aaKnown RBP14.31□□□□□ -0.12
LIMK1-208ENST00000538333 TEDDM1Q5T9Z0 273 aa14.31□□□□□ -0.12
LIMK1-208ENST00000538333 BTBD8Q5XKL5 378 aa14.31□□□□□ -0.12
LIMK1-208ENST00000538333 RWDD4Q6NW29 188 aaKnown RBP14.31□□□□□ -0.12
LIMK1-208ENST00000538333 ZCCHC23Q6ZST2 131 aa14.31□□□□□ -0.12
LIMK1-208ENST00000538333 TTC7BQ86TV6 843 aa14.31□□□□□ -0.12
LIMK1-208ENST00000538333 ARID3BQ8IVW6 561 aaPredicted RBP14.31□□□□□ -0.12
LIMK1-208ENST00000538333 LINC01599Q8WXQ3 324 aa14.31□□□□□ -0.12
LIMK1-208ENST00000538333 MCMBPQ9BTE3 642 aa14.31□□□□□ -0.12
LIMK1-208ENST00000538333 NMUR1Q9HB89 426 aa14.31□□□□□ -0.12
LIMK1-208ENST00000538333 RNF186Q9NXI6 227 aa14.31□□□□□ -0.12
LIMK1-208ENST00000538333 SFMBT1Q9UHJ3 866 aa14.31□□□□□ -0.12
LIMK1-208ENST00000538333 ADAM28Q9UKQ2 775 aa14.31□□□□□ -0.12
LIMK1-208ENST00000538333 VWA8A3KMH1 1905 aa14.31□□□□□ -0.12
LIMK1-208ENST00000538333 MSI1O43347 362 aaKnown RBP14.3□□□□□ -0.12
LIMK1-208ENST00000538333 PROCP04070 461 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 FGF3P11487 239 aaPredicted RBP14.3□□□□□ -0.12
LIMK1-208ENST00000538333 CKBP12277 381 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 CCR1P32246 355 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 LIMK2P53671 638 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 IRX4P78413 519 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 COG7P83436 770 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 STX3Q13277 289 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 MBTPS1Q14703 1052 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 KRT72Q14CN4 511 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 PCLAFQ15004 111 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 PPM1JQ5JR12 505 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 CLLU1OSQ5K130 101 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 OTOP3Q7RTS5 596 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 ATP2A3Q93084 1043 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 AGAP2Q99490 1192 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 MIPEPQ99797 713 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 APOL2Q9BQE5 337 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 IL22Q9GZX6 179 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 THAP1Q9NVV9 213 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 UBP1Q9NZI7 540 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 TXNDC16Q9P2K2 825 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 SOX13Q9UN79 622 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 HBS1LQ9Y450 684 aaKnown RBP14.3□□□□□ -0.12
LIMK1-208ENST00000538333 MYLKQ15746 1914 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 MAGEB16A2A368 324 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 TMEM189-UBE2V1I3L0A0 370 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 FCHO1O14526 889 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 ATP9BO43861 1147 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 WFS1O76024 890 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 OAZ2O95190 189 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 EOMESO95936 686 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 TYK2P29597 1187 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 ACLYP53396 1101 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 ZBTB16Q05516 673 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 PPP2R5DQ14738 602 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 SLC39A12Q504Y0 691 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 MAP3K21Q5TCX8 1036 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 GLB1LQ6UWU2 654 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 ALYREFQ86V81 257 aaKnown RBP14.3□□□□□ -0.12
LIMK1-208ENST00000538333 DCLK2Q8N568 766 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 TBC1D31Q96DN5 1066 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 FCRL2Q96LA5 508 aaPredicted RBP14.3□□□□□ -0.12
LIMK1-208ENST00000538333 NMUR2Q9GZQ4 415 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 ZCWPW1Q9H0M4 648 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 CHRAC1Q9NRG0 131 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 SNX15Q9NRS6 342 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 OSER1Q9NX31 292 aa14.3□□□□□ -0.12
LIMK1-208ENST00000538333 DOCK4Q8N1I0 1966 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 KCNU1A8MYU2 1149 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 FGF10O15520 208 aaPredicted RBP14.29□□□□□ -0.12
LIMK1-208ENST00000538333 MAFKO60675 156 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 CABYRO75952 493 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 ALDH1A1P00352 501 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 SPRP35270 261 aaPredicted RBP14.29□□□□□ -0.12
LIMK1-208ENST00000538333 RPL10AP62906 217 aaKnown RBP14.29□□□□□ -0.12
LIMK1-208ENST00000538333 CDH17Q12864 832 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 HSP90AA5PQ58FG0 334 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 NAPEPLDQ6IQ20 393 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 FSTL4Q6MZW2 842 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 SLC24A5Q71RS6 500 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 CCDC91Q7Z6B0 441 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 STRA8Q7Z7C7 330 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 CMC1Q7Z7K0 106 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 CEP57Q86XR8 500 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 CRLF3Q8IUI8 442 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 COLGALT2Q8IYK4 626 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 LZTR1Q8N653 840 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 FAM13CQ8NE31 585 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 IL12RB2Q99665 862 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 TUBB6Q9BUF5 446 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 NDFIP2Q9NV92 336 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 TMEM216Q9P0N5 145 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 ABT1Q9ULW3 272 aaKnown RBP14.29□□□□□ -0.12
LIMK1-208ENST00000538333 L3MBTL1Q9Y468 752 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms