RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 PRKCHP24723 683 aa11□□□□□ -0.65
CLIP1-210ENST00000538120 GPR15P49685 360 aa11□□□□□ -0.65
CLIP1-210ENST00000538120 C1QTNF12Q5T7M4 302 aa11□□□□□ -0.65
CLIP1-210ENST00000538120 ANO7Q6IWH7 933 aa11□□□□□ -0.65
CLIP1-210ENST00000538120 OTOAQ7RTW8 1153 aa11□□□□□ -0.65
CLIP1-210ENST00000538120 STKLD1Q8NE28 680 aa11□□□□□ -0.65
CLIP1-210ENST00000538120 SH3TC2Q8TF17 1288 aa11□□□□□ -0.65
CLIP1-210ENST00000538120 ZNF483Q8TF39 744 aaPredicted RBP11□□□□□ -0.65
CLIP1-210ENST00000538120 CASP10Q92851 521 aa11□□□□□ -0.65
CLIP1-210ENST00000538120 SMC6Q96SB8 1091 aa11□□□□□ -0.65
CLIP1-210ENST00000538120 EBNA1BP2Q99848 306 aaKnown RBP11□□□□□ -0.65
CLIP1-210ENST00000538120 OSBPL2Q9H1P3 480 aa11□□□□□ -0.65
CLIP1-210ENST00000538120 DENND2DQ9H6A0 471 aaPredicted RBP11□□□□□ -0.65
CLIP1-210ENST00000538120 ELAC1Q9H777 363 aaKnown RBP11□□□□□ -0.65
CLIP1-210ENST00000538120 SSU72Q9NP77 194 aaKnown RBP11□□□□□ -0.65
CLIP1-210ENST00000538120 OSER1Q9NX31 292 aa11□□□□□ -0.65
CLIP1-210ENST00000538120 CORO1CQ9ULV4 474 aaPredicted RBP11□□□□□ -0.65
CLIP1-210ENST00000538120 SMG5Q9UPR3 1016 aaKnown RBP11□□□□□ -0.65
CLIP1-210ENST00000538120 RAD54BQ9Y620 910 aa11□□□□□ -0.65
CLIP1-210ENST00000538120 ZNF638Q14966 1978 aaKnown RBP11□□□□□ -0.65
CLIP1-210ENST00000538120 A6NHS1 94 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 IRAK2O43187 625 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 HOXA2O43364 376 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 TADA2AO75478 443 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 KRT4P19013 534 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 PTPN3P26045 913 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 PSMB4P28070 264 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 PPIDQ08752 370 aaKnown RBP10.99□□□□□ -0.65
CLIP1-210ENST00000538120 FAAP100Q0VG06 881 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 OVGP1Q12889 678 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 IFRD2Q12894 506 aaPredicted RBP10.99□□□□□ -0.65
CLIP1-210ENST00000538120 MRPL58Q14197 206 aaKnown RBP10.99□□□□□ -0.65
CLIP1-210ENST00000538120 SPARCL1Q14515 664 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 PDK4Q16654 411 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 SDHAF4Q5VUM1 108 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 RFWD3Q6PCD5 774 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 SH2D5Q6ZV89 423 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 CRIPAKQ8N1N5 446 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 LRRC8CQ8TDW0 803 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 DPF3Q92784 378 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 XAB2Q9HCS7 855 aaKnown RBP10.99□□□□□ -0.65
CLIP1-210ENST00000538120 NPHS2Q9NP85 383 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 EIF2B3Q9NR50 452 aaKnown RBP10.99□□□□□ -0.65
CLIP1-210ENST00000538120 ABCC13Q9NSE7 274 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 ABI2Q9NYB9 513 aaPredicted RBP10.99□□□□□ -0.65
CLIP1-210ENST00000538120 SEPT10Q9P0V9 454 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 IGSF9Q9P2J2 1179 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 HCSTQ9UBK5 93 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 SFMBT1Q9UHJ3 866 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 LRRC42Q9Y546 428 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 PATJQ8NI35 1801 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 DPPA5A6NC42 116 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 KCNK1O00180 336 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 TRDMT1O14717 391 aaKnown RBP10.99□□□□□ -0.65
CLIP1-210ENST00000538120 FAM155BO75949 473 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 PTDSS1P48651 473 aaKnown RBP10.99□□□□□ -0.65
CLIP1-210ENST00000538120 GALNT2Q10471 571 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 DDR2Q16832 855 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 LRRC8BQ6P9F7 803 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 MTDHQ86UE4 582 aaKnown RBP10.99□□□□□ -0.65
CLIP1-210ENST00000538120 SCN4BQ8IWT1 228 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 DCP1BQ8IZD4 617 aaKnown RBP10.99□□□□□ -0.65
CLIP1-210ENST00000538120 TTC30BQ8N4P2 665 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 ARMC2Q8NEN0 867 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 ZSCAN18Q8TBC5 510 aaPredicted RBP10.99□□□□□ -0.65
CLIP1-210ENST00000538120 DEPDC1BQ8WUY9 529 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 SERAC1Q96JX3 654 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 MIPEPQ99797 713 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 GPR62Q9BZJ7 368 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 IRF2BPLQ9H1B7 796 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 UNC93B1Q9H1C4 597 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 MARCH5Q9NX47 278 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 ZFATQ9P243 1243 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 DCTN4Q9UJW0 460 aa10.99□□□□□ -0.65
CLIP1-210ENST00000538120 A0A1W2PQH9 124 aa10.98□□□□□ -0.65
CLIP1-210ENST00000538120 MSI1O43347 362 aaKnown RBP10.98□□□□□ -0.65
CLIP1-210ENST00000538120 UGT1A9O60656 530 aa10.98□□□□□ -0.65
CLIP1-210ENST00000538120 APOEP02649 317 aa10.98□□□□□ -0.65
CLIP1-210ENST00000538120 GSTA2P09210 222 aa10.98□□□□□ -0.65
CLIP1-210ENST00000538120 MLNP12872 115 aa10.98□□□□□ -0.65
CLIP1-210ENST00000538120 ZNF135P52742 658 aaPredicted RBP10.98□□□□□ -0.65
CLIP1-210ENST00000538120 CDK16Q00536 496 aa10.98□□□□□ -0.65
CLIP1-210ENST00000538120 BTBD8Q5XKL5 378 aa10.98□□□□□ -0.65
CLIP1-210ENST00000538120 TRMT10BQ6PF06 316 aaKnown RBP10.98□□□□□ -0.65
CLIP1-210ENST00000538120 LVRNQ6Q4G3 990 aa10.98□□□□□ -0.65
CLIP1-210ENST00000538120 PDZD4Q76G19 769 aaPredicted RBP10.98□□□□□ -0.65
CLIP1-210ENST00000538120 BANPQ8N9N5 519 aa10.98□□□□□ -0.65
CLIP1-210ENST00000538120 RNF34Q969K3 372 aa10.98□□□□□ -0.65
CLIP1-210ENST00000538120 B3GALT6Q96L58 329 aa10.98□□□□□ -0.65
CLIP1-210ENST00000538120 FAM193BQ96PV7 902 aaPredicted RBP10.98□□□□□ -0.65
CLIP1-210ENST00000538120 KLF6Q99612 283 aaPredicted RBP10.98□□□□□ -0.65
CLIP1-210ENST00000538120 TRIM62Q9BVG3 475 aa10.98□□□□□ -0.65
CLIP1-210ENST00000538120 SMOC2Q9H3U7 446 aa10.98□□□□□ -0.65
CLIP1-210ENST00000538120 UGT1A7Q9HAW7 530 aa10.98□□□□□ -0.65
CLIP1-210ENST00000538120 UGT1A10Q9HAW8 530 aa10.98□□□□□ -0.65
CLIP1-210ENST00000538120 UGT1A8Q9HAW9 530 aa10.98□□□□□ -0.65
CLIP1-210ENST00000538120 ALG13Q9NP73 1137 aaKnown RBP10.98□□□□□ -0.65
CLIP1-210ENST00000538120 NUDT5Q9UKK9 219 aa10.98□□□□□ -0.65
CLIP1-210ENST00000538120 PCDHA11Q9Y5I1 949 aa10.98□□□□□ -0.65
CLIP1-210ENST00000538120 GOLGA8RI6L899 631 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms