RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 BCL2L1Q07817 233 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 CCDC153Q494R4 210 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 PABPC1LQ4VXU2 614 aaKnown RBP10.25□□□□□ -0.77
GGA3-201ENST00000537686 C16orf87Q6PH81 154 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 RNF148Q8N7C7 305 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 C1orf127Q8N9H9 656 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 VPS50Q96JG6 964 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 CATSPER2Q96P56 530 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 MRPL45Q9BRJ2 306 aaKnown RBP10.25□□□□□ -0.77
GGA3-201ENST00000537686 ST6GALNAC4Q9H4F1 302 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 CNGB3Q9NQW8 809 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 GEMIN8Q9NWZ8 242 aaKnown RBP10.25□□□□□ -0.77
GGA3-201ENST00000537686 WNK3Q9BYP7 1800 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 GNG14A0A1W2PPG7 69 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 KATNA1O75449 491 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 BANF1O75531 89 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 ITGAVP06756 1048 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 PSMA4P25789 261 aaKnown RBP10.25□□□□□ -0.77
GGA3-201ENST00000537686 GPC1P35052 558 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 CHKAP35790 457 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 NOVP48745 357 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 CDC16Q13042 620 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 TUSC3Q13454 348 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 LRRC23Q53EV4 343 aaPredicted RBP10.25□□□□□ -0.77
GGA3-201ENST00000537686 HECTD3Q5T447 861 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 P3H2Q8IVL5 708 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 PHACTR4Q8IZ21 702 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 C2orf49Q9BVC5 232 aaPredicted RBP10.25□□□□□ -0.77
GGA3-201ENST00000537686 PARVBQ9HBI1 364 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 BATF3Q9NR55 127 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 SFMBT1Q9UHJ3 866 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 LNPEPQ9UIQ6 1025 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 IPPQ9Y573 584 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 C4AP0C0L4 1744 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 SOWAHBA6NEL2 793 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 FGF10O15520 208 aaPredicted RBP10.24□□□□□ -0.77
GGA3-201ENST00000537686 TBC1D4O60343 1298 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 CCNT2O60583 730 aaKnown RBP10.24□□□□□ -0.77
GGA3-201ENST00000537686 PCDH8O95206 1070 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 CBX6O95503 412 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 CCNB1P14635 433 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 CRABP2P29373 138 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 PEX5P50542 639 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 MAP3K10Q02779 954 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 CHRNB3Q05901 458 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 MTA1Q13330 715 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 ARMC6Q6NXE6 501 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 HORMAD1Q86X24 394 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 METTL6Q8TCB7 284 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 CERS2Q96G23 380 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 ZNF558Q96NG5 402 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 UXTQ9UBK9 157 aaPredicted RBP10.24□□□□□ -0.77
GGA3-201ENST00000537686 RAD54BQ9Y620 910 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 PTCH2Q9Y6C5 1203 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 SMIM35A0A1B0GVV1 85 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 MGAT4DA6NG13 374 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 PDZK1P1A8MUH7 402 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 XPO1O14980 1071 aaKnown RBP10.24□□□□□ -0.77
GGA3-201ENST00000537686 KDM1AO60341 852 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 PIGNO95427 931 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 KRT6AP02538 564 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 AMHP03971 560 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 KRT6BP04259 564 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 MMP3P08254 477 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 PIRTP0C851 137 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 HLA-DPA1P20036 260 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 RPA3P35244 121 aaPredicted RBP10.24□□□□□ -0.77
GGA3-201ENST00000537686 KRT6CP48668 564 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 MRPS5P82675 430 aaKnown RBP10.24□□□□□ -0.77
GGA3-201ENST00000537686 HPCAP84074 193 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 DDR2Q16832 855 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 ARMC12Q5T9G4 340 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 SYTL1Q8IYJ3 562 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 MREGQ8N565 214 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 PLEKHA8Q96JA3 519 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 SEMA3CQ99985 751 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 NIFKQ9BYG3 293 aaKnown RBP10.24□□□□□ -0.77
GGA3-201ENST00000537686 MID1IP1Q9NPA3 183 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 GIMAP4Q9NUV9 329 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 SALL4Q9UJQ4 1053 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 LOC102724159A0A0B4J2E5 919 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 BTN3A1O00481 513 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 SYNCRIPO60506 623 aaKnown RBP10.24□□□□□ -0.77
GGA3-201ENST00000537686 IGSF6O95976 241 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 C4BPAP04003 597 aaKnown RBP10.24□□□□□ -0.77
GGA3-201ENST00000537686 ZNF23P17027 643 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 CD86P42081 329 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 PWP2Q15269 919 aaKnown RBP10.24□□□□□ -0.77
GGA3-201ENST00000537686 CYP51A1Q16850 503 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 C9orf57Q5W0N0 161 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 GRAMD4Q6IC98 578 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 MIER2Q8N344 545 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 TMEM159Q96B96 161 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 EXOC2Q96KP1 924 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 TMEM237Q96Q45 408 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 CCT7Q99832 543 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 PIF1Q9H611 641 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 BCAS3Q9H6U6 928 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 ERVK-5Q9HDB9 667 aa10.24□□□□□ -0.77
GGA3-201ENST00000537686 R3HDM2Q9Y2K5 976 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms