RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 MFN1Q8IWA4 741 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 MAFAQ8NHW3 353 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 ARHGEF2Q92974 986 aaKnown RBP16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 ZNF419Q96HQ0 510 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 HOMER3Q9NSC5 361 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 PCYOX1Q9UHG3 505 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 ACTL7AQ9Y615 435 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 KIF26AQ9ULI4 1882 aaPredicted RBP16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 TYW5A2RUC4 315 aaKnown RBP16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 J3KR12 359 aa16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 SGK1O00141 431 aa16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 KCNK1O00180 336 aa16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 KCNN4O15554 427 aa16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 MAFKO60675 156 aa16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 ECI2O75521 394 aa16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 CYBBP04839 570 aa16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 ITGAVP06756 1048 aa16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 GDI1P31150 447 aa16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 CD70P32970 193 aa16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 POLD3Q15054 466 aaPredicted RBP16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 PDK1Q15118 436 aa16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 GAB4Q2WGN9 574 aa16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 LEXMQ3ZCV2 418 aa16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 PTCRAQ6ISU1 281 aaPredicted RBP16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 C8orf74Q6P047 294 aa16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 JAMLQ86YT9 394 aa16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 ATPAF2Q8N5M1 289 aa16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 LZTR1Q8N653 840 aa16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 ALLCQ8N6M5 410 aa16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 TFB1MQ8WVM0 346 aaKnown RBP16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 OTUB2Q96DC9 234 aa16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 SPON2Q9BUD6 331 aa16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 FRMD8P1Q9BZ68 369 aaPredicted RBP16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 GTSE1Q9NYZ3 720 aa16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 NEU2Q9Y3R4 380 aa16.03■□□□□ 0.16
SFSWAP-206ENST00000537582 MYOFQ9NZM1 2061 aa16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 BCLAF3A2AJT9 711 aaKnown RBP16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 PPP1R12AO14974 1030 aaPredicted RBP16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 ADH5P11766 374 aa16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 IL9P15248 144 aa16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 PSMC3P17980 439 aa16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 VPS41P49754 854 aa16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 PPIDQ08752 370 aaKnown RBP16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 MESP2Q0VG99 397 aa16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 LMAN2Q12907 356 aa16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 XRCC4Q13426 336 aa16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 TRADDQ15628 312 aa16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 SMAD2Q15796 467 aaKnown RBP16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 ERCC6LQ2NKX8 1250 aa16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 MPP7Q5T2T1 576 aa16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 C6orf118Q5T5N4 469 aa16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 GSTA5Q7RTV2 222 aa16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 ZNF354CQ86Y25 554 aa16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 CDKL3Q8IVW4 592 aaPredicted RBP16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 APCDD1Q8J025 514 aa16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 TAB3Q8N5C8 712 aaPredicted RBP16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 ATL2Q8NHH9 583 aa16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 HDAC11Q96DB2 347 aa16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 LMLNQ96KR4 655 aa16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 PHF7Q9BWX1 381 aaPredicted RBP16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 THG1LQ9NWX6 298 aaKnown RBP16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 MARK1Q9P0L2 795 aa16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 SEPT10Q9P0V9 454 aa16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 LIMD1Q9UGP4 676 aa16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 DMGDHQ9UI17 866 aaKnown RBP16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 IPO11Q9UI26 975 aaKnown RBP16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 DRG1Q9Y295 367 aaKnown RBP16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 OR51B4Q9Y5P0 310 aa16.02■□□□□ 0.16
SFSWAP-206ENST00000537582 COL6A3P12111 3177 aa16.02■□□□□ 0.15
SFSWAP-206ENST00000537582 NUP205Q92621 2012 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 ILVBLA1L0T0 632 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 EFCAB8A8MWE9 144 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 SNAP91O60641 907 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 ECEL1O95672 775 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 IFNB1P01574 187 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 MX2P20592 715 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 HLA-FP30511 346 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 WASHC5Q12768 1159 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 ZBTB17Q13105 803 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 SERINC3Q13530 473 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 AAK1Q2M2I8 961 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 PARP15Q460N3 678 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 MTSS1LQ765P7 747 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 MTERF4Q7Z6M4 381 aaKnown RBP16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 SETD3Q86TU7 594 aaPredicted RBP16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 YAF2Q8IY57 180 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 USP33Q8TEY7 942 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 ATP2A3Q93084 1043 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 E2F7Q96AV8 911 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 ALG14Q96F25 216 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 TRIM31Q9BZY9 425 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 MUC3BQ9H195 1237 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 ECT2Q9H8V3 914 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 ABCB8Q9NUT2 735 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 INTS6Q9UL03 887 aaKnown RBP16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 RAD54BQ9Y620 910 aa16.01■□□□□ 0.15
SFSWAP-206ENST00000537582 ESYT3A0FGR9 886 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 ARHGAP42A6NI28 874 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 HACD1B0YJ81 288 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 F5H423 210 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms