RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 ZBTB11O95625 1053 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 MYCP01106 439 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 LCP1P13796 627 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 MSX2P35548 267 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 QARSP47897 775 aaKnown RBP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 GRSF1Q12849 480 aaKnown RBP eCLIP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 CBWD2Q8IUF1 395 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 FAM47BQ8NA70 645 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 ST13P5Q8NFI4 369 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 TAMM41Q96BW9 452 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 SNX18Q96RF0 628 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 PPM1HQ9ULR3 514 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 MAGP20916 626 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 GRK3P35626 688 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 ORC1Q13415 861 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 RBM20Q5T481 1227 aaKnown RBP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 FAAH2Q6GMR7 532 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 ERAP2Q6P179 960 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 KCNK18Q7Z418 384 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 ANGPTL6Q8NI99 470 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 OCEL1Q9H607 264 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 FKBP14Q9NWM8 211 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 STMN3Q9NZ72 180 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 VTI1BQ9UEU0 232 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 KLHL3Q9UH77 587 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 KLHL20Q9Y2M5 609 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 ARAP2Q8WZ64 1704 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 UBA6A0AVT1 1052 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 E7ESA3 106 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 DFFAO00273 331 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 SMIM18P0DKX4 95 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 YWHABP31946 246 aaKnown RBP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 RPS3AP61247 264 aaKnown RBP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 FCHO2Q0JRZ9 810 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 MYLK3Q32MK0 819 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 ADGRA1Q86SQ6 560 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 RDM1Q8NG50 284 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 OR6P1Q8NGX9 317 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 ASZ1Q8WWH4 475 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 FAR2Q96K12 515 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 ENTPD7Q9NQZ7 604 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 IARS2Q9NSE4 1012 aaKnown RBP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 DLEC1Q9Y238 1755 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 WDR27A2RRH5 827 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 VAPBO95292 243 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 SEC24AO95486 1093 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 PABPC1P11940 636 aaKnown RBP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 DCKP27707 260 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 SULT1E1P49888 294 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 GCNT1Q02742 428 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 MTX3Q5HYI7 312 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 MFSD7Q6UXD7 560 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 PRR23BQ6ZRT6 265 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 CYS1Q717R9 158 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 CCDC117Q8IWD4 279 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 FAM71AQ8IYT1 594 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 C2orf69Q8N8R5 385 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 MAGEE2Q8TD90 523 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 FAM84BQ96KN1 310 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 C9orf16Q9BUW7 83 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 GBA3Q9H227 469 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 TPK1Q9H3S4 243 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 JMJD4Q9H9V9 463 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 PTPRHQ9HD43 1115 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 SIX2Q9NPC8 291 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 RPRD1BQ9NQG5 326 aaKnown RBP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 FAM49BQ9NUQ9 324 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 GABBR1Q9UBS5 961 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 GAKO14976 1311 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 ILVBLA1L0T0 632 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 FAM155AB1AL88 458 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 CRTAMO95727 393 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 PSMC5P62195 406 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 MSLNQ13421 630 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 SURF1Q15526 300 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 ZIK1Q3SY52 487 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 TFDP3Q5H9I0 405 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 RALGPS1Q5JS13 557 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 AGAP7PQ5VUJ5 663 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 PRMT9Q6P2P2 845 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 ANKRD13BQ86YJ7 626 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 MCOLN2Q8IZK6 566 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 CELF1Q92879 486 aaKnown RBP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 CBWD1Q9BRT8 395 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 ANKRD60Q9BZ19 345 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 SCN4AP35499 1836 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 SUPT3HB4E1H0 165 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 H3BSA7 217 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 SNPHO15079 494 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 TADA2AO75478 443 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 TPTEP56180 551 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 KCNC4Q03721 635 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 BOLA3Q53S33 107 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 GADL1Q6ZQY3 521 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 DCP2Q8IU60 420 aaKnown RBP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 PGAM4Q8N0Y7 254 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 SFRP1Q8N474 314 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 CNTD1Q8N815 330 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 SLC44A1Q8WWI5 657 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms