RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 NSFP46459 744 aaKnown RBP18.38■□□□□ 0.53
TNFRSF1A-209ENST00000536717 STK19P49842 368 aaPredicted RBP18.38■□□□□ 0.53
TNFRSF1A-209ENST00000536717 DUOXA1Q1HG43 343 aa18.38■□□□□ 0.53
TNFRSF1A-209ENST00000536717 ALFQ53S48 1182 aa18.38■□□□□ 0.53
TNFRSF1A-209ENST00000536717 C9orf64Q5T6V5 341 aa18.38■□□□□ 0.53
TNFRSF1A-209ENST00000536717 IL31Q6EBC2 164 aa18.38■□□□□ 0.53
TNFRSF1A-209ENST00000536717 ZNF571Q7Z3V5 609 aaPredicted RBP18.38■□□□□ 0.53
TNFRSF1A-209ENST00000536717 FAM131BQ86XD5 332 aa18.38■□□□□ 0.53
TNFRSF1A-209ENST00000536717 PHF13Q86YI8 300 aaPredicted RBP18.38■□□□□ 0.53
TNFRSF1A-209ENST00000536717 FOXJ1Q92949 421 aa18.38■□□□□ 0.53
TNFRSF1A-209ENST00000536717 C1orf74Q96LT6 269 aa18.38■□□□□ 0.53
TNFRSF1A-209ENST00000536717 RSPH9Q9H1X1 276 aaPredicted RBP18.38■□□□□ 0.53
TNFRSF1A-209ENST00000536717 TMEM51Q9NW97 253 aa18.38■□□□□ 0.53
TNFRSF1A-209ENST00000536717 TBC1D30Q9Y2I9 924 aa18.38■□□□□ 0.53
TNFRSF1A-209ENST00000536717 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF1A-209ENST00000536717 C2CD4BA6NLJ0 364 aa18.37■□□□□ 0.53
TNFRSF1A-209ENST00000536717 C4orf47A7E2U8 309 aa18.37■□□□□ 0.53
TNFRSF1A-209ENST00000536717 MAOBP27338 520 aa18.37■□□□□ 0.53
TNFRSF1A-209ENST00000536717 CDH4P55283 916 aa18.37■□□□□ 0.53
TNFRSF1A-209ENST00000536717 OXCT1P55809 520 aa18.37■□□□□ 0.53
TNFRSF1A-209ENST00000536717 ATP11AP98196 1134 aa18.37■□□□□ 0.53
TNFRSF1A-209ENST00000536717 ZBTB16Q05516 673 aa18.37■□□□□ 0.53
TNFRSF1A-209ENST00000536717 ZNF177Q13360 481 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF1A-209ENST00000536717 C15orf59Q2T9L4 293 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF1A-209ENST00000536717 SH3PXD2AQ5TCZ1 1133 aa18.37■□□□□ 0.53
TNFRSF1A-209ENST00000536717 FAM124AQ86V42 546 aa18.37■□□□□ 0.53
TNFRSF1A-209ENST00000536717 CADM4Q8NFZ8 388 aa18.37■□□□□ 0.53
TNFRSF1A-209ENST00000536717 RXFP2Q8WXD0 754 aa18.37■□□□□ 0.53
TNFRSF1A-209ENST00000536717 PTPRN2Q92932 1015 aa18.37■□□□□ 0.53
TNFRSF1A-209ENST00000536717 FEM1AQ9BSK4 669 aa18.37■□□□□ 0.53
TNFRSF1A-209ENST00000536717 SYT11Q9BT88 431 aa18.37■□□□□ 0.53
TNFRSF1A-209ENST00000536717 NUSAP1Q9BXS6 441 aaKnown RBP18.37■□□□□ 0.53
TNFRSF1A-209ENST00000536717 CAPN10Q9HC96 672 aa18.37■□□□□ 0.53
TNFRSF1A-209ENST00000536717 ADAM22Q9P0K1 906 aa18.37■□□□□ 0.53
TNFRSF1A-209ENST00000536717 OR51B4Q9Y5P0 310 aa18.37■□□□□ 0.53
TNFRSF1A-209ENST00000536717 TMEM131Q92545 1883 aa18.36■□□□□ 0.53
TNFRSF1A-209ENST00000536717 IGLV3-10A0A075B6K4 115 aa18.36■□□□□ 0.53
TNFRSF1A-209ENST00000536717 DRGXA6NNA5 263 aa18.36■□□□□ 0.53
TNFRSF1A-209ENST00000536717 ACSL1P33121 698 aa18.36■□□□□ 0.53
TNFRSF1A-209ENST00000536717 SULT2A1Q06520 285 aa18.36■□□□□ 0.53
TNFRSF1A-209ENST00000536717 CDO1Q16878 200 aa18.36■□□□□ 0.53
TNFRSF1A-209ENST00000536717 CCDC14Q49A88 953 aa18.36■□□□□ 0.53
TNFRSF1A-209ENST00000536717 RNF219Q5W0B1 726 aaPredicted RBP18.36■□□□□ 0.53
TNFRSF1A-209ENST00000536717 ZNF776Q68DI1 518 aaPredicted RBP18.36■□□□□ 0.53
TNFRSF1A-209ENST00000536717 WDR59Q6PJI9 974 aa18.36■□□□□ 0.53
TNFRSF1A-209ENST00000536717 MON1BQ7L1V2 547 aa18.36■□□□□ 0.53
TNFRSF1A-209ENST00000536717 RGL4Q8IZJ4 473 aa18.36■□□□□ 0.53
TNFRSF1A-209ENST00000536717 CEP76Q8TAP6 659 aa18.36■□□□□ 0.53
TNFRSF1A-209ENST00000536717 DNASE2BQ8WZ79 361 aa18.36■□□□□ 0.53
TNFRSF1A-209ENST00000536717 PANX2Q96RD6 677 aa18.36■□□□□ 0.53
TNFRSF1A-209ENST00000536717 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.36■□□□□ 0.53
TNFRSF1A-209ENST00000536717 DEF6Q9H4E7 631 aa18.36■□□□□ 0.53
TNFRSF1A-209ENST00000536717 TMEM9BQ9NQ34 198 aa18.36■□□□□ 0.53
TNFRSF1A-209ENST00000536717 FSCN3Q9NQT6 498 aa18.36■□□□□ 0.53
TNFRSF1A-209ENST00000536717 ARHGAP20Q9P2F6 1191 aa18.36■□□□□ 0.53
TNFRSF1A-209ENST00000536717 PLXNA2O75051 1894 aa18.36■□□□□ 0.53
TNFRSF1A-209ENST00000536717 EDDM13A0A1B0GTR0 161 aa18.35■□□□□ 0.53
TNFRSF1A-209ENST00000536717 TCRBV5S1A1TA0A578 114 aa18.35■□□□□ 0.53
TNFRSF1A-209ENST00000536717 TARSL2A2RTX5 802 aaKnown RBP18.35■□□□□ 0.53
TNFRSF1A-209ENST00000536717 METTL12A8MUP2 240 aa18.35■□□□□ 0.53
TNFRSF1A-209ENST00000536717 E9PAM4 449 aa18.35■□□□□ 0.53
TNFRSF1A-209ENST00000536717 DNTTP04053 509 aa18.35■□□□□ 0.53
TNFRSF1A-209ENST00000536717 CFIP05156 583 aa18.35■□□□□ 0.53
TNFRSF1A-209ENST00000536717 PLEKP08567 350 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF1A-209ENST00000536717 SERPINF2P08697 491 aa18.35■□□□□ 0.53
TNFRSF1A-209ENST00000536717 ENGP17813 658 aa18.35■□□□□ 0.53
TNFRSF1A-209ENST00000536717 SDC4P31431 198 aa18.35■□□□□ 0.53
TNFRSF1A-209ENST00000536717 PTPN9P43378 593 aa18.35■□□□□ 0.53
TNFRSF1A-209ENST00000536717 GSDMDP57764 484 aa18.35■□□□□ 0.53
TNFRSF1A-209ENST00000536717 SYCP2LQ5T4T6 812 aa18.35■□□□□ 0.53
TNFRSF1A-209ENST00000536717 DCAF12L1Q5VU92 463 aa18.35■□□□□ 0.53
TNFRSF1A-209ENST00000536717 PPP1R2P3Q6NXS1 205 aa18.35■□□□□ 0.53
TNFRSF1A-209ENST00000536717 C3orf20Q8ND61 904 aa18.35■□□□□ 0.53
TNFRSF1A-209ENST00000536717 HAPLN3Q96S86 360 aa18.35■□□□□ 0.53
TNFRSF1A-209ENST00000536717 MPP6Q9NZW5 540 aa18.35■□□□□ 0.53
TNFRSF1A-209ENST00000536717 SLC6A14Q9UN76 642 aa18.35■□□□□ 0.53
TNFRSF1A-209ENST00000536717 SSU72P8A0A1W2PR75 194 aa18.34■□□□□ 0.53
TNFRSF1A-209ENST00000536717 CALB1P05937 261 aa18.34■□□□□ 0.53
TNFRSF1A-209ENST00000536717 KRT3P12035 628 aa18.34■□□□□ 0.53
TNFRSF1A-209ENST00000536717 VAV1P15498 845 aa18.34■□□□□ 0.53
TNFRSF1A-209ENST00000536717 RFC1P35251 1148 aaPredicted RBP18.34■□□□□ 0.53
TNFRSF1A-209ENST00000536717 VASPP50552 380 aaPredicted RBP18.34■□□□□ 0.53
TNFRSF1A-209ENST00000536717 TTC31Q49AM3 519 aaPredicted RBP18.34■□□□□ 0.53
TNFRSF1A-209ENST00000536717 PPM1JQ5JR12 505 aa18.34■□□□□ 0.53
TNFRSF1A-209ENST00000536717 WDR45BQ5MNZ6 344 aa18.34■□□□□ 0.53
TNFRSF1A-209ENST00000536717 ACBD5Q5T8D3 534 aaPredicted RBP18.34■□□□□ 0.53
TNFRSF1A-209ENST00000536717 RABEPKQ7Z6M1 372 aa18.34■□□□□ 0.53
TNFRSF1A-209ENST00000536717 FRS2Q8WU20 508 aa18.34■□□□□ 0.53
TNFRSF1A-209ENST00000536717 CENPIQ92674 756 aaPredicted RBP18.34■□□□□ 0.53
TNFRSF1A-209ENST00000536717 PPP1R9BQ96SB3 815 aa18.34■□□□□ 0.53
TNFRSF1A-209ENST00000536717 FAM129BQ96TA1 746 aa18.34■□□□□ 0.53
TNFRSF1A-209ENST00000536717 C6orf106Q9H6K1 298 aaPredicted RBP18.34■□□□□ 0.53
TNFRSF1A-209ENST00000536717 ZNF212Q9UDV6 495 aa18.34■□□□□ 0.53
TNFRSF1A-209ENST00000536717 ADAMTS1Q9UHI8 967 aa18.34■□□□□ 0.53
TNFRSF1A-209ENST00000536717 MEI4A8MW99 385 aa18.33■□□□□ 0.53
TNFRSF1A-209ENST00000536717 TPRP12270 2363 aaKnown RBP18.33■□□□□ 0.53
TNFRSF1A-209ENST00000536717 EIF4A3P38919 411 aaKnown RBP18.33■□□□□ 0.53
TNFRSF1A-209ENST00000536717 NNMTP40261 264 aa18.33■□□□□ 0.53
TNFRSF1A-209ENST00000536717 C1QBPQ07021 282 aaKnown RBP18.33■□□□□ 0.53
TNFRSF1A-209ENST00000536717 MAPK8IP2Q13387 824 aaPredicted RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms