RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 ALG14Q96F25 216 aa14.69□□□□□ -0.06
RTN3P1-201ENST00000536295 PGAP3Q96FM1 320 aaPredicted RBP14.69□□□□□ -0.06
RTN3P1-201ENST00000536295 PPP1R9BQ96SB3 815 aa14.69□□□□□ -0.06
RTN3P1-201ENST00000536295 METTL5Q9NRN9 209 aaKnown RBP14.69□□□□□ -0.06
RTN3P1-201ENST00000536295 FNDC3AQ9Y2H6 1198 aaKnown RBP14.69□□□□□ -0.06
RTN3P1-201ENST00000536295 PAXBP1Q9Y5B6 917 aa14.69□□□□□ -0.06
RTN3P1-201ENST00000536295 PCDHB9Q9Y5E1 797 aa14.69□□□□□ -0.06
RTN3P1-201ENST00000536295 TPRP12270 2363 aaKnown RBP14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 ACACBO00763 2458 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 LRRC72A6NJI9 287 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 PLK4O00444 970 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 HYAL3O43820 417 aaPredicted RBP14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 SRGAP2O75044 1071 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 ADH1BP00325 375 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 IGHV4-34P06331 123 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 CHRNB2P17787 502 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 CDK11BP21127 795 aaKnown RBP14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 C5AR1P21730 350 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 METAP1P53582 386 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 JAM2P57087 298 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 ATP11AP98196 1134 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 FMO1Q01740 532 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 KIF19Q2TAC6 998 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 POM121L1PQ3SYA9 428 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 C5orf22Q49AR2 442 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 LRRC31Q6UY01 552 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 TFAP2DQ7Z6R9 452 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 ADAT2Q7Z6V5 191 aaKnown RBP14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 FAM131BQ86XD5 332 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 ZNF677Q86XU0 584 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 NEK11Q8NG66 645 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 OR14C36Q8NHC7 312 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 SETD7Q8WTS6 366 aaKnown RBP14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 FRS2Q8WU20 508 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 C11orf70Q9BRQ4 267 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 SCNM1Q9BWG6 230 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 TM7SF3Q9NS93 570 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 MPP6Q9NZW5 540 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 TMEM59LQ9UK28 342 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 FZD4Q9ULV1 537 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 ANKRD6Q9Y2G4 727 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 TBC1D30Q9Y2I9 924 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 SIK3Q9Y2K2 1263 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 OR51B4Q9Y5P0 310 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 SNX11Q9Y5W9 270 aa14.68□□□□□ -0.06
RTN3P1-201ENST00000536295 E9PAM4 449 aa14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 KCNK3O14649 394 aa14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 SNAP91O60641 907 aa14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 GJB6O95452 261 aa14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 CYP1A1P04798 512 aaPredicted RBP14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 GOT1P17174 413 aa14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 RDXP35241 583 aaKnown RBP14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 STAT1P42224 750 aa14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 UBXN1Q04323 297 aa14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 TRIP6Q15654 476 aaKnown RBP14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 DLG2Q15700 870 aa14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 CDO1Q16878 200 aa14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 RAB6CQ53S08 254 aa14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 CCDC183Q5T5S1 534 aa14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 Q6ZVU0 165 aa14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 ZNF683Q8IZ20 524 aa14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 OR2T34Q8NGX1 318 aa14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 OR8D1Q8WZ84 308 aa14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 SLC6A18Q96N87 628 aa14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 ORAI3Q9BRQ5 295 aa14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 RAB6CQ9H0N0 254 aa14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 LIMA1Q9UHB6 759 aaKnown RBP14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 ADAMTS1Q9UHI8 967 aa14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 WASF3Q9UPY6 502 aa14.67□□□□□ -0.06
RTN3P1-201ENST00000536295 CACNA1EQ15878 2313 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 TBC1D3DA0A087WVF3 549 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 TBC1D3IA0A087WXS9 549 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 TBC1D3EA0A087X179 549 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 TBC1D3KA0A087X1G2 549 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 A0A1W2PPC4 97 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 TBC1D3FA6NER0 549 aaPredicted RBP14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 LGALS16A8MUM7 142 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 C1QTNF9BB2RNN3 333 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 TBC1D3LB9A6J9 549 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 ATP9BO43861 1147 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 MBD3O95983 291 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 MT-CO1P00395 513 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 TBC1D3HP0C7X1 549 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 C1QTNF9P0C862 333 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 MMP8P22894 467 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 DRD3P35462 400 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 GRIA4P48058 902 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 ADPRHP54922 357 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 KRT83P78385 493 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 HNRNPDQ14103 355 aaKnown RBP14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 C15orf59Q2T9L4 293 aaPredicted RBP14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 KCNT1Q5JUK3 1230 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 TBC1D3GQ6DHY5 549 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 TBC1D3CQ6IPX1 549 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 DSG4Q86SJ6 1040 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 TBC1D3Q8IZP1 549 aaPredicted RBP14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 SH2D3CQ8N5H7 860 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 AOPEPQ8N6M6 819 aa14.66□□□□□ -0.06
RTN3P1-201ENST00000536295 ATP11CQ8NB49 1132 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms