RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 DBX2Q6ZNG2 339 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 MMS22LQ6ZRQ5 1243 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 ERICH1Q86X53 443 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 XYLT1Q86Y38 959 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 APCDD1Q8J025 514 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 ZNF366Q8N895 744 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 MSANTD4Q8NCY6 345 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 PTPRN2Q92932 1015 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 IGSF8Q969P0 613 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 FAM131CQ96AQ9 280 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 FAM129BQ96TA1 746 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 SYNCQ9H7C4 482 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 ANO10Q9NW15 660 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 NOCTQ9UK39 431 aaKnown RBP11.12□□□□□ -0.63
CCDC60-202ENST00000535685 FZD4Q9ULV1 537 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 NCKAP1Q9Y2A7 1128 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.12□□□□□ -0.63
CCDC60-202ENST00000535685 PAXBP1Q9Y5B6 917 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 OR51B4Q9Y5P0 310 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 HS3ST4Q9Y661 456 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 TRPM6Q9BX84 2022 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 PLXNA2O75051 1894 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 IGLV3-10A0A075B6K4 115 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 DRGXA6NNA5 263 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 M0QYT0 321 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 ATP9BO43861 1147 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 PAGE1O75459 146 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 ENDOD1O94919 500 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 CYP1A1P04798 512 aaPredicted RBP11.11□□□□□ -0.63
CCDC60-202ENST00000535685 TPM2P07951 284 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 JUNDP17535 347 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 CD27P26842 260 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 NNMTP40261 264 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 CTSOP43234 321 aaPredicted RBP11.11□□□□□ -0.63
CCDC60-202ENST00000535685 CDH4P55283 916 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 JAM2P57087 298 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 ELAVL3Q14576 367 aaKnown RBP11.11□□□□□ -0.63
CCDC60-202ENST00000535685 CST6Q15828 149 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 HSP90AA4PQ58FG1 418 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 ARTNQ5T4W7 220 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 NOP9Q86U38 636 aaKnown RBP11.11□□□□□ -0.63
CCDC60-202ENST00000535685 ZNF683Q8IZ20 524 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 ZCCHC9Q8N567 271 aaKnown RBP11.11□□□□□ -0.63
CCDC60-202ENST00000535685 DEFB124Q8NES8 71 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 FRS2Q8WU20 508 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 RNF34Q969K3 372 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 ORAI3Q9BRQ5 295 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 FEM1AQ9BSK4 669 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 GTPBP2Q9BX10 602 aaKnown RBP11.11□□□□□ -0.63
CCDC60-202ENST00000535685 PDCL3Q9H2J4 239 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 ALG2Q9H553 416 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 C6orf106Q9H6K1 298 aaPredicted RBP11.11□□□□□ -0.63
CCDC60-202ENST00000535685 WDCPQ9H6R7 721 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 FSCN3Q9NQT6 498 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 PIGVQ9NUD9 493 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 TAB2Q9NYJ8 693 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 LIMA1Q9UHB6 759 aaKnown RBP11.11□□□□□ -0.63
CCDC60-202ENST00000535685 EIF2B4Q9UI10 523 aaKnown RBP11.11□□□□□ -0.63
CCDC60-202ENST00000535685 SLCO3A1Q9UIG8 710 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 TMEM59LQ9UK28 342 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 SIK3Q9Y2K2 1263 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 PCDHGB2Q9Y5G2 931 aa11.11□□□□□ -0.63
CCDC60-202ENST00000535685 PTPRBP23467 1997 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 FRYQ5TBA9 3013 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.1□□□□□ -0.63
CCDC60-202ENST00000535685 CXorf51AA0A1B0GTR3 108 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 TTC34A8MYJ7 566 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 GOLGA6L22H0YM25 854 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 I6L893 689 aaPredicted RBP11.1□□□□□ -0.63
CCDC60-202ENST00000535685 PES1O00541 588 aaKnown RBP11.1□□□□□ -0.63
CCDC60-202ENST00000535685 ALOX15BO15296 676 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 ADCY5O95622 1261 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 CER1O95813 267 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 ADH1BP00325 375 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 PDGFRAP16234 1089 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 ZNF18P17022 549 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 C5AR1P21730 350 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 MMP8P22894 467 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 MZF1P28698 734 aaPredicted RBP11.1□□□□□ -0.63
CCDC60-202ENST00000535685 SOX5P35711 763 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 SOX11P35716 441 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 GRIA4P48058 902 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 CCR5P51681 352 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 AFF3P51826 1226 aaKnown RBP11.1□□□□□ -0.63
CCDC60-202ENST00000535685 GSCP56915 257 aaPredicted RBP11.1□□□□□ -0.63
CCDC60-202ENST00000535685 CDR2Q01850 454 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 BNC1Q01954 994 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 NME3Q13232 169 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 ZNF177Q13360 481 aaPredicted RBP11.1□□□□□ -0.63
CCDC60-202ENST00000535685 FKBP15Q5T1M5 1219 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 RNF219Q5W0B1 726 aaPredicted RBP11.1□□□□□ -0.63
CCDC60-202ENST00000535685 KIAA0895LQ68EN5 471 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 TRIM72Q6ZMU5 477 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 SND1Q7KZF4 910 aaKnown RBP eCLIP11.1□□□□□ -0.63
CCDC60-202ENST00000535685 GLRX5Q86SX6 157 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 SETD3Q86TU7 594 aaPredicted RBP11.1□□□□□ -0.63
CCDC60-202ENST00000535685 FAM124AQ86V42 546 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 DHX40Q8IX18 779 aaKnown RBP11.1□□□□□ -0.63
CCDC60-202ENST00000535685 BIRC7Q96CA5 298 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 RPRD1AQ96P16 312 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms