RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 HTR4Q13639 388 aa12.63□□□□□ -0.39
SCARB1-204ENST00000535005 DPYSQ14117 519 aa12.63□□□□□ -0.39
SCARB1-204ENST00000535005 TFDP3Q5H9I0 405 aa12.63□□□□□ -0.39
SCARB1-204ENST00000535005 PARM1Q6UWI2 310 aa12.63□□□□□ -0.39
SCARB1-204ENST00000535005 VITQ6UXI7 678 aa12.63□□□□□ -0.39
SCARB1-204ENST00000535005 RFX8Q6ZV50 586 aa12.63□□□□□ -0.39
SCARB1-204ENST00000535005 ANKS1BQ7Z6G8 1248 aa12.63□□□□□ -0.39
SCARB1-204ENST00000535005 RASGEF1CQ8N431 466 aa12.63□□□□□ -0.39
SCARB1-204ENST00000535005 CCDC26Q8TAB7 109 aa12.63□□□□□ -0.39
SCARB1-204ENST00000535005 OSCP1Q8WVF1 389 aa12.63□□□□□ -0.39
SCARB1-204ENST00000535005 FGF14Q92915 247 aa12.63□□□□□ -0.39
SCARB1-204ENST00000535005 CALN1Q9BXU9 219 aa12.63□□□□□ -0.39
SCARB1-204ENST00000535005 OSBPL8Q9BZF1 889 aa12.63□□□□□ -0.39
SCARB1-204ENST00000535005 THG1LQ9NWX6 298 aaKnown RBP12.63□□□□□ -0.39
SCARB1-204ENST00000535005 VANGL2Q9ULK5 521 aa12.63□□□□□ -0.39
SCARB1-204ENST00000535005 TTC7AQ9ULT0 858 aaPredicted RBP12.63□□□□□ -0.39
SCARB1-204ENST00000535005 WASH4PA8MWX3 477 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 C2CD4DB7Z1M9 353 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 FGF10O15520 208 aaPredicted RBP12.62□□□□□ -0.39
SCARB1-204ENST00000535005 CREB3O43889 395 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 RHOQP17081 205 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 TPI1P60174 286 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 MMRN1Q13201 1228 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 HLTFQ14527 1009 aaKnown RBP eCLIP12.62□□□□□ -0.39
SCARB1-204ENST00000535005 PDGFRLQ15198 375 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 MPPE1Q53F39 396 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 RABGAP1LQ5R372 815 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 MPP7Q5T2T1 576 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 SEL1L2Q5TEA6 688 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 TTC39BQ5VTQ0 682 aaPredicted RBP12.62□□□□□ -0.39
SCARB1-204ENST00000535005 RNF43Q68DV7 783 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 TLDC1Q6P9B6 456 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 RFWD3Q6PCD5 774 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 ADGRG2Q8IZP9 1017 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 LGI2Q8N0V4 545 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 PCDH19Q8TAB3 1148 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 CCT6BQ92526 530 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 IGSF8Q969P0 613 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 MS4A14Q96JA4 679 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 FAM83CQ9BQN1 747 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 PLA2G2FQ9BZM2 168 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 ZYG11BQ9C0D3 744 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 LINC00597Q9H2U6 94 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 PPANQ9NQ55 473 aaKnown RBP12.62□□□□□ -0.39
SCARB1-204ENST00000535005 SMARCAL1Q9NZC9 954 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 SCAMP3O14828 347 aaKnown RBP12.62□□□□□ -0.39
SCARB1-204ENST00000535005 PSMC3P17980 439 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 EPHB2P29323 1055 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 ECHS1P30084 290 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 IFNAR2P48551 515 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 TFDP2Q14188 446 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 EML3Q32P44 896 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 SLC9A4Q6AI14 798 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 AADACL2Q6P093 401 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 PQLC3Q8N755 202 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 HJURPQ8NCD3 748 aaPredicted RBP12.62□□□□□ -0.39
SCARB1-204ENST00000535005 TTC16Q8NEE8 873 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 IRF7Q92985 503 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 TLCD1Q96CP7 247 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 TMA16Q96EY4 203 aaKnown RBP12.62□□□□□ -0.39
SCARB1-204ENST00000535005 MYEOVQ96EZ4 313 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 RSRC1Q96IZ7 334 aaKnown RBP12.62□□□□□ -0.39
SCARB1-204ENST00000535005 PRICKLE1Q96MT3 831 aaPredicted RBP12.62□□□□□ -0.39
SCARB1-204ENST00000535005 RPRD1AQ96P16 312 aaPredicted RBP12.62□□□□□ -0.39
SCARB1-204ENST00000535005 PSMB7Q99436 277 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 CATSPERBQ9H7T0 1116 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 PRDM6Q9NQX0 595 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 ARHGEF4Q9NR80 690 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 DUS2Q9NX74 493 aaKnown RBP12.62□□□□□ -0.39
SCARB1-204ENST00000535005 MARK1Q9P0L2 795 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 TPX2Q9ULW0 747 aaKnown RBP12.62□□□□□ -0.39
SCARB1-204ENST00000535005 WNT6Q9Y6F9 365 aa12.62□□□□□ -0.39
SCARB1-204ENST00000535005 PPP1R12AO14974 1030 aaPredicted RBP12.61□□□□□ -0.39
SCARB1-204ENST00000535005 DCLK1O15075 740 aa12.61□□□□□ -0.39
SCARB1-204ENST00000535005 CHADO15335 359 aa12.61□□□□□ -0.39
SCARB1-204ENST00000535005 CEP104O60308 925 aa12.61□□□□□ -0.39
SCARB1-204ENST00000535005 ZFXP17010 805 aaPredicted RBP12.61□□□□□ -0.39
SCARB1-204ENST00000535005 ERCC2P18074 760 aa12.61□□□□□ -0.39
SCARB1-204ENST00000535005 DRD4P21917 467 aa12.61□□□□□ -0.39
SCARB1-204ENST00000535005 AMPD1P23109 780 aa12.61□□□□□ -0.39
SCARB1-204ENST00000535005 HPDP32754 393 aaPredicted RBP12.61□□□□□ -0.39
SCARB1-204ENST00000535005 IRX1P78414 480 aaPredicted RBP12.61□□□□□ -0.39
SCARB1-204ENST00000535005 TFF2Q03403 129 aa12.61□□□□□ -0.39
SCARB1-204ENST00000535005 UAP1Q16222 522 aaPredicted RBP12.61□□□□□ -0.39
SCARB1-204ENST00000535005 AAK1Q2M2I8 961 aa12.61□□□□□ -0.39
SCARB1-204ENST00000535005 BBS12Q6ZW61 710 aa12.61□□□□□ -0.39
SCARB1-204ENST00000535005 CHST9Q7L1S5 443 aa12.61□□□□□ -0.39
SCARB1-204ENST00000535005 SLC13A5Q86YT5 568 aaPredicted RBP12.61□□□□□ -0.39
SCARB1-204ENST00000535005 RTL3Q8N8U3 475 aaKnown RBP12.61□□□□□ -0.39
SCARB1-204ENST00000535005 CCDC197Q8NCU1 140 aa12.61□□□□□ -0.39
SCARB1-204ENST00000535005 CHMP6Q96FZ7 201 aa12.61□□□□□ -0.39
SCARB1-204ENST00000535005 ANKRD27Q96NW4 1050 aa12.61□□□□□ -0.39
SCARB1-204ENST00000535005 KXD1Q9BQD3 176 aa12.61□□□□□ -0.39
SCARB1-204ENST00000535005 RPP25Q9BUL9 199 aaKnown RBP12.61□□□□□ -0.39
SCARB1-204ENST00000535005 MAK16Q9BXY0 300 aaKnown RBP12.61□□□□□ -0.39
SCARB1-204ENST00000535005 FAM129AQ9BZQ8 928 aa12.61□□□□□ -0.39
SCARB1-204ENST00000535005 CCDC134Q9H6E4 229 aa12.61□□□□□ -0.39
SCARB1-204ENST00000535005 SPHK2Q9NRA0 654 aa12.61□□□□□ -0.39
SCARB1-204ENST00000535005 TMEM248Q9NWD8 314 aa12.61□□□□□ -0.39
SCARB1-204ENST00000535005 IGSF9Q9P2J2 1179 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms