RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	PCDHB4	Q9Y5E5	795 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647		A0A1W2PP55	124 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	FAM149A	A5PLN7	773 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	TTC34	A8MYJ7	566 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647		M0QYV0	167 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	ENC1	O14682	589 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	MID1	O15344	667 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	RNASEH2A	O75792	299 aa	Known RBP	11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	LDOC1	O95751	146 aa	Predicted RBP	11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	ADH1B	P00325	375 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	NUDT1	P36639	197 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	ACADSB	P45954	432 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	ARRB1	P49407	418 aa	Predicted RBP	11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	PLK1	P53350	603 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	CETN1	Q12798	172 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	OVGP1	Q12889	678 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	ILK	Q13418	452 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	EIF4EBP2	Q13542	120 aa	Predicted RBP	11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	CDH18	Q13634	790 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	ELAVL3	Q14576	367 aa	Known RBP	11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	DCAF6	Q58WW2	860 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	SLC45A4	Q5BKX6	768 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	IQCH	Q86VS3	1027 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	MMAA	Q8IVH4	418 aa	Known RBP	11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	DHX40	Q8IX18	779 aa	Known RBP	11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	CARNMT1	Q8N4J0	409 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	AADAT	Q8N5Z0	425 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	CLEC4C	Q8WTT0	213 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	PTPRN2	Q92932	1015 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	LRIG1	Q96JA1	1093 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	SLC6A18	Q96N87	628 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	BBC3	Q96PG8	261 aa	Predicted RBP	11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	FUCA2	Q9BTY2	467 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	NRSN2	Q9GZP1	204 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	NUCKS1	Q9H1E3	243 aa	Known RBP	11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	GDF3	Q9NR23	364 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	ANO10	Q9NW15	660 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	SLCO3A1	Q9UIG8	710 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	NAALADL1	Q9UQQ1	740 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	KNTC1	P50748	2209 aa		11.92	□□□□□ -0.5
CTNND1-238	ENST00000534647	FAM47DP	A6NHR8	397 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	TK2	O00142	265 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	TLR4	O00206	839 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	SLC7A4	O43246	635 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	RFPL3	O75679	317 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	SMC2	O95347	1197 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	IGLV3-25	P01717	112 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	ITGAV	P06756	1048 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	NUDT7	P0C024	238 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	JUP	P14923	745 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	ABCB4	P21439	1286 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	BRD2	P25440	801 aa	Known RBP	11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	HNF1B	P35680	557 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	NNMT	P40261	264 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	PPP1R2	P41236	205 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	CTSO	P43234	321 aa	Predicted RBP	11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	ADPRH	P54922	357 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	OXCT1	P55809	520 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	NXPH1	P58417	271 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	SULT2A1	Q06520	285 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	RTP5	Q14D33	572 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	SFMBT2	Q5VUG0	894 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	SYPL2	Q5VXT5	272 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	TMEM110	Q86TL2	294 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	GATAD2A	Q86YP4	633 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	ELOA2	Q8IYF1	753 aa	Predicted RBP	11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	APCDD1	Q8J025	514 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	PPM1K	Q8N3J5	372 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	OXR1	Q8N573	874 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	MFSD2A	Q8NA29	543 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	EHBP1	Q8NDI1	1231 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	NXPE2	Q96DL1	559 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	CNDP2	Q96KP4	475 aa	Known RBP	11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	BTN2A3P	Q96KV6	586 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	SLC4A5	Q9BY07	1137 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	AASDHPPT	Q9NRN7	309 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	KIAA1468	Q9P260	1216 aa		11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	GOLGA4	Q13439	2230 aa	Known RBP	11.91	□□□□□ -0.5
CTNND1-238	ENST00000534647	TRIM49B	A6NDI0	452 aa		11.9	□□□□□ -0.5
CTNND1-238	ENST00000534647	PIK3R2	O00459	728 aa		11.9	□□□□□ -0.5
CTNND1-238	ENST00000534647	PSMA7	O14818	248 aa		11.9	□□□□□ -0.5
CTNND1-238	ENST00000534647	WNT9A	O14904	365 aa		11.9	□□□□□ -0.5
CTNND1-238	ENST00000534647	APOE	P02649	317 aa		11.9	□□□□□ -0.5
CTNND1-238	ENST00000534647	TACR2	P21452	398 aa		11.9	□□□□□ -0.5
CTNND1-238	ENST00000534647	EPHA8	P29322	1005 aa	Predicted RBP	11.9	□□□□□ -0.5
CTNND1-238	ENST00000534647	DRD3	P35462	400 aa		11.9	□□□□□ -0.5
CTNND1-238	ENST00000534647	EIF2S3	P41091	472 aa	Known RBP	11.9	□□□□□ -0.5
CTNND1-238	ENST00000534647	ACADVL	P49748	655 aa		11.9	□□□□□ -0.5
CTNND1-238	ENST00000534647	YWHAZ	P63104	245 aa	Known RBP	11.9	□□□□□ -0.5
CTNND1-238	ENST00000534647	IL9R	Q01113	521 aa		11.9	□□□□□ -0.5
CTNND1-238	ENST00000534647	ANO6	Q4KMQ2	910 aa		11.9	□□□□□ -0.5
CTNND1-238	ENST00000534647	PRAMEF14	Q5SWL7	426 aa		11.9	□□□□□ -0.5
CTNND1-238	ENST00000534647	C6orf118	Q5T5N4	469 aa		11.9	□□□□□ -0.5
CTNND1-238	ENST00000534647	RNF219	Q5W0B1	726 aa	Predicted RBP	11.9	□□□□□ -0.5
CTNND1-238	ENST00000534647	NAPEPLD	Q6IQ20	393 aa		11.9	□□□□□ -0.5
CTNND1-238	ENST00000534647	FBXL19	Q6PCT2	694 aa		11.9	□□□□□ -0.5
CTNND1-238	ENST00000534647	MMS22L	Q6ZRQ5	1243 aa		11.9	□□□□□ -0.5
CTNND1-238	ENST00000534647	KANSL1	Q7Z3B3	1105 aa		11.9	□□□□□ -0.5
CTNND1-238	ENST00000534647	LGI2	Q8N0V4	545 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms