RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 CIR1Q86X95 450 aaPredicted RBP21.97■■□□□ 1.11
SSH3-211ENST00000534112 CCAR2Q8N163 923 aaKnown RBP21.97■■□□□ 1.11
SSH3-211ENST00000534112 EHBP1Q8NDI1 1231 aa21.97■■□□□ 1.11
SSH3-211ENST00000534112 SLC39A7Q92504 469 aa21.97■■□□□ 1.11
SSH3-211ENST00000534112 DHTKD1Q96HY7 919 aaPredicted RBP21.97■■□□□ 1.11
SSH3-211ENST00000534112 KREMEN1Q96MU8 473 aa21.97■■□□□ 1.11
SSH3-211ENST00000534112 PRMT1Q99873 361 aaKnown RBP21.97■■□□□ 1.11
SSH3-211ENST00000534112 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.97■■□□□ 1.11
SSH3-211ENST00000534112 SLC12A6Q9UHW9 1150 aa21.97■■□□□ 1.11
SSH3-211ENST00000534112 SARDHQ9UL12 918 aa21.97■■□□□ 1.11
SSH3-211ENST00000534112 CNTN6Q9UQ52 1028 aa21.97■■□□□ 1.11
SSH3-211ENST00000534112 DMTF1Q9Y222 760 aa21.97■■□□□ 1.11
SSH3-211ENST00000534112 ARID1BQ8NFD5 2236 aaPredicted RBP21.96■■□□□ 1.11
SSH3-211ENST00000534112 PTPRQQ9UMZ3 2332 aa21.96■■□□□ 1.11
SSH3-211ENST00000534112 TK2O00142 265 aa21.96■■□□□ 1.11
SSH3-211ENST00000534112 PLRG1O43660 514 aaKnown RBP21.96■■□□□ 1.11
SSH3-211ENST00000534112 MAGEC1O60732 1142 aa21.96■■□□□ 1.11
SSH3-211ENST00000534112 PITX1P78337 314 aaPredicted RBP21.96■■□□□ 1.11
SSH3-211ENST00000534112 C19orf57Q0VDD7 668 aa21.96■■□□□ 1.11
SSH3-211ENST00000534112 EIF4EBP2Q13542 120 aaPredicted RBP21.96■■□□□ 1.11
SSH3-211ENST00000534112 STIM1Q13586 685 aa21.96■■□□□ 1.11
SSH3-211ENST00000534112 STAT4Q14765 748 aa21.96■■□□□ 1.11
SSH3-211ENST00000534112 FAM46CQ5VWP2 391 aa21.96■■□□□ 1.11
SSH3-211ENST00000534112 DSG4Q86SJ6 1040 aa21.96■■□□□ 1.11
SSH3-211ENST00000534112 TMEM110Q86TL2 294 aa21.96■■□□□ 1.11
SSH3-211ENST00000534112 CACTIN-AS1Q8N1I8 211 aa21.96■■□□□ 1.11
SSH3-211ENST00000534112 ATP6V0D2Q8N8Y2 350 aa21.96■■□□□ 1.11
SSH3-211ENST00000534112 SNIP1Q8TAD8 396 aaKnown RBP21.96■■□□□ 1.11
SSH3-211ENST00000534112 RFFLQ8WZ73 363 aa21.96■■□□□ 1.11
SSH3-211ENST00000534112 OR8D1Q8WZ84 308 aa21.96■■□□□ 1.11
SSH3-211ENST00000534112 MED15Q96RN5 788 aa21.96■■□□□ 1.11
SSH3-211ENST00000534112 SETXQ7Z333 2677 aaKnown RBP21.95■■□□□ 1.1
SSH3-211ENST00000534112 E5RJQ4 531 aa21.95■■□□□ 1.1
SSH3-211ENST00000534112 ATXN7O15265 892 aaPredicted RBP21.95■■□□□ 1.1
SSH3-211ENST00000534112 KRT5P13647 590 aa21.95■■□□□ 1.1
SSH3-211ENST00000534112 VASPP50552 380 aaPredicted RBP21.95■■□□□ 1.1
SSH3-211ENST00000534112 OXCT1P55809 520 aa21.95■■□□□ 1.1
SSH3-211ENST00000534112 CNTN1Q12860 1018 aa21.95■■□□□ 1.1
SSH3-211ENST00000534112 CXorf57Q6NSI4 855 aaKnown RBP21.95■■□□□ 1.1
SSH3-211ENST00000534112 TRIM69Q86WT6 500 aa21.95■■□□□ 1.1
SSH3-211ENST00000534112 BAP1Q92560 729 aa21.95■■□□□ 1.1
SSH3-211ENST00000534112 FGF11Q92914 225 aa21.95■■□□□ 1.1
SSH3-211ENST00000534112 THAP9Q9H5L6 903 aa21.95■■□□□ 1.1
SSH3-211ENST00000534112 PPM1HQ9ULR3 514 aa21.95■■□□□ 1.1
SSH3-211ENST00000534112 CLCA2Q9UQC9 943 aa21.95■■□□□ 1.1
SSH3-211ENST00000534112 A0A1B0GVM2 712 aa21.94■■□□□ 1.1
SSH3-211ENST00000534112 TCAF2A6NFQ2 919 aa21.94■■□□□ 1.1
SSH3-211ENST00000534112 TRIM38O00635 465 aa21.94■■□□□ 1.1
SSH3-211ENST00000534112 ATP9BO43861 1147 aa21.94■■□□□ 1.1
SSH3-211ENST00000534112 SDC3O75056 442 aa21.94■■□□□ 1.1
SSH3-211ENST00000534112 CD44P16070 742 aaKnown RBP21.94■■□□□ 1.1
SSH3-211ENST00000534112 GLDCP23378 1020 aa21.94■■□□□ 1.1
SSH3-211ENST00000534112 ACP1P24666 158 aa21.94■■□□□ 1.1
SSH3-211ENST00000534112 INSM1Q01101 510 aaPredicted RBP21.94■■□□□ 1.1
SSH3-211ENST00000534112 TAF5Q15542 800 aa21.94■■□□□ 1.1
SSH3-211ENST00000534112 MEA1Q16626 185 aa21.94■■□□□ 1.1
SSH3-211ENST00000534112 PROX2Q3B8N5 592 aa21.94■■□□□ 1.1
SSH3-211ENST00000534112 POM121L1PQ3SYA9 428 aa21.94■■□□□ 1.1
SSH3-211ENST00000534112 ACCSLQ4AC99 568 aa21.94■■□□□ 1.1
SSH3-211ENST00000534112 RABGAP1LQ5R372 815 aa21.94■■□□□ 1.1
SSH3-211ENST00000534112 TTC39BQ5VTQ0 682 aaPredicted RBP21.94■■□□□ 1.1
SSH3-211ENST00000534112 AGBL4Q5VU57 503 aa21.94■■□□□ 1.1
SSH3-211ENST00000534112 ISM2Q6H9L7 571 aa21.94■■□□□ 1.1
SSH3-211ENST00000534112 FBXL22Q6P050 247 aa21.94■■□□□ 1.1
SSH3-211ENST00000534112 ALG14Q96F25 216 aa21.94■■□□□ 1.1
SSH3-211ENST00000534112 PPP1R9BQ96SB3 815 aa21.94■■□□□ 1.1
SSH3-211ENST00000534112 CA5BQ9Y2D0 317 aa21.94■■□□□ 1.1
SSH3-211ENST00000534112 PRAMEF26H0Y7S4 382 aa21.93■■□□□ 1.1
SSH3-211ENST00000534112 MED7O43513 233 aa21.93■■□□□ 1.1
SSH3-211ENST00000534112 SIGLEC6O43699 453 aa21.93■■□□□ 1.1
SSH3-211ENST00000534112 BRINP1O60477 761 aa21.93■■□□□ 1.1
SSH3-211ENST00000534112 C1QL1O75973 258 aa21.93■■□□□ 1.1
SSH3-211ENST00000534112 LETM1O95202 739 aaPredicted RBP21.93■■□□□ 1.1
SSH3-211ENST00000534112 ZIC2O95409 532 aaPredicted RBP21.93■■□□□ 1.1
SSH3-211ENST00000534112 SLC2A3P11169 496 aa21.93■■□□□ 1.1
SSH3-211ENST00000534112 KCNH2Q12809 1159 aa21.93■■□□□ 1.1
SSH3-211ENST00000534112 ZNF211Q13398 564 aaPredicted RBP21.93■■□□□ 1.1
SSH3-211ENST00000534112 DLG2Q15700 870 aa21.93■■□□□ 1.1
SSH3-211ENST00000534112 SETMARQ53H47 684 aaPredicted RBP21.93■■□□□ 1.1
SSH3-211ENST00000534112 TTI2Q6NXR4 508 aa21.93■■□□□ 1.1
SSH3-211ENST00000534112 SLC25A45Q8N413 288 aa21.93■■□□□ 1.1
SSH3-211ENST00000534112 DCBLD1Q8N8Z6 715 aa21.93■■□□□ 1.1
SSH3-211ENST00000534112 ZNF606Q8WXB4 792 aa21.93■■□□□ 1.1
SSH3-211ENST00000534112 FCRL3Q96P31 734 aaPredicted RBP21.93■■□□□ 1.1
SSH3-211ENST00000534112 FEM1AQ9BSK4 669 aa21.93■■□□□ 1.1
SSH3-211ENST00000534112 FAM204AQ9H8W3 233 aa21.93■■□□□ 1.1
SSH3-211ENST00000534112 GOLGA6L4A6NEF3 574 aa21.92■■□□□ 1.1
SSH3-211ENST00000534112 MCF2LO15068 1137 aa21.92■■□□□ 1.1
SSH3-211ENST00000534112 CCR1P32246 355 aa21.92■■□□□ 1.1
SSH3-211ENST00000534112 CDK17Q00537 523 aa21.92■■□□□ 1.1
SSH3-211ENST00000534112 E2F1Q01094 437 aa21.92■■□□□ 1.1
SSH3-211ENST00000534112 OR52K2Q8NGK3 314 aa21.92■■□□□ 1.1
SSH3-211ENST00000534112 RNF34Q969K3 372 aa21.92■■□□□ 1.1
SSH3-211ENST00000534112 KLHDC7BQ96G42 594 aa21.92■■□□□ 1.1
SSH3-211ENST00000534112 RPRD1AQ96P16 312 aaPredicted RBP21.92■■□□□ 1.1
SSH3-211ENST00000534112 INTS2Q9H0H0 1204 aaKnown RBP21.92■■□□□ 1.1
SSH3-211ENST00000534112 UBE2TQ9NPD8 197 aaPredicted RBP21.92■■□□□ 1.1
SSH3-211ENST00000534112 DDIT4Q9NX09 232 aa21.92■■□□□ 1.1
SSH3-211ENST00000534112 HOOK1Q9UJC3 728 aaKnown RBP21.92■■□□□ 1.1
SSH3-211ENST00000534112 SLC25A13Q9UJS0 675 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms