RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 PPM1LQ5SGD2 360 aa4.52□□□□□ -1.69
CTSC-208ENST00000533897 C9orf57Q5W0N0 161 aa4.52□□□□□ -1.69
CTSC-208ENST00000533897 HMBOX1Q6NT76 420 aa4.52□□□□□ -1.69
CTSC-208ENST00000533897 SATL1Q86VE3 508 aa4.52□□□□□ -1.69
CTSC-208ENST00000533897 LCA5Q86VQ0 697 aa4.52□□□□□ -1.69
CTSC-208ENST00000533897 POU5F2Q8N7G0 328 aa4.52□□□□□ -1.69
CTSC-208ENST00000533897 RDH11Q8TC12 318 aa4.52□□□□□ -1.69
CTSC-208ENST00000533897 ATP2A3Q93084 1043 aa4.52□□□□□ -1.69
CTSC-208ENST00000533897 NTAN1Q96AB6 310 aa4.52□□□□□ -1.69
CTSC-208ENST00000533897 MCUR1Q96AQ8 359 aa4.52□□□□□ -1.69
CTSC-208ENST00000533897 TSGA13Q96PP4 275 aa4.52□□□□□ -1.69
CTSC-208ENST00000533897 AGAP2Q99490 1192 aa4.52□□□□□ -1.69
CTSC-208ENST00000533897 PKMYT1Q99640 499 aa4.52□□□□□ -1.69
CTSC-208ENST00000533897 LBHD1Q9BQE6 289 aaPredicted RBP4.52□□□□□ -1.69
CTSC-208ENST00000533897 NAT9Q9BTE0 207 aa4.52□□□□□ -1.69
CTSC-208ENST00000533897 KIFC1Q9BW19 673 aa4.52□□□□□ -1.69
CTSC-208ENST00000533897 APOL6Q9BWW8 343 aa4.52□□□□□ -1.69
CTSC-208ENST00000533897 DNAI2Q9GZS0 605 aa4.52□□□□□ -1.69
CTSC-208ENST00000533897 VCXQ9H320 206 aa4.52□□□□□ -1.69
CTSC-208ENST00000533897 ST14Q9Y5Y6 855 aa4.52□□□□□ -1.69
CTSC-208ENST00000533897 CEPT1Q9Y6K0 416 aa4.52□□□□□ -1.69
CTSC-208ENST00000533897 VWA8A3KMH1 1905 aa4.52□□□□□ -1.69
CTSC-208ENST00000533897 A0A087WZ62 844 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 A0A1B0GTW7 788 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 SMIM31A0A1B0GVY4 71 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 I3L4J1 428 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 RNF103O00237 685 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 FBP2O00757 339 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 CRTAMO95727 393 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 KITP10721 976 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 KCNE1P15382 129 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 IGFBP6P24592 240 aaPredicted RBP4.51□□□□□ -1.69
CTSC-208ENST00000533897 PSMB4P28070 264 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 GP5P40197 560 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 MRPL19P49406 292 aaKnown RBP4.51□□□□□ -1.69
CTSC-208ENST00000533897 CHN2P52757 468 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 THOP1P52888 689 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 RBP5P82980 135 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 TIAL1Q01085 375 aaKnown RBP eCLIP4.51□□□□□ -1.69
CTSC-208ENST00000533897 FOLH1Q04609 750 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 GALNT2Q10471 571 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 ZBTB17Q13105 803 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 ITGA9Q13797 1035 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 PDK3Q15120 406 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 FXNQ16595 210 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 MANEALQ5VSG8 457 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 PRAMEF18Q5VWM3 479 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 ARMC3Q5W041 872 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 RFX8Q6ZV50 586 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 CMC1Q7Z7K0 106 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 ARHGAP18Q8N392 663 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 COLGALT1Q8NBJ5 622 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 PPTC7Q8NI37 304 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 DCUN1D1Q96GG9 259 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 HEXIM2Q96MH2 286 aaKnown RBP4.51□□□□□ -1.69
CTSC-208ENST00000533897 LENG8Q96PV6 779 aaPredicted RBP4.51□□□□□ -1.69
CTSC-208ENST00000533897 RANBP9Q96S59 729 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 FDXACB1Q9BRP7 624 aaPredicted RBP4.51□□□□□ -1.69
CTSC-208ENST00000533897 FTHL17Q9BXU8 183 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 IQCGQ9H095 443 aaKnown RBP4.51□□□□□ -1.69
CTSC-208ENST00000533897 SMARCAD1Q9H4L7 1026 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 DUS2Q9NX74 493 aaKnown RBP4.51□□□□□ -1.69
CTSC-208ENST00000533897 HEY1Q9Y5J3 304 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 ANAPC1Q9H1A4 1944 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 NUP205Q92621 2012 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 C15orf38-AP3S2A0A0A6YYH1 394 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 TCRBV3S1A0A5B6 114 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 C7orf72A4D263 438 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 MBLAC1A4D2B0 266 aaPredicted RBP4.51□□□□□ -1.69
CTSC-208ENST00000533897 A6NJR5 290 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 XPO1O14980 1071 aaKnown RBP4.51□□□□□ -1.69
CTSC-208ENST00000533897 SMIM24O75264 130 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 PDE5AO76074 875 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 LGALS2P05162 132 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 MPOP05164 745 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 CHRNGP07510 517 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 ERVK-10P10266 1014 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 RALBP11234 206 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 RAG1P15918 1043 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 WARSP23381 471 aaKnown RBP4.51□□□□□ -1.69
CTSC-208ENST00000533897 PCSK6P29122 969 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 CCR10P46092 362 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 OSTNP61366 133 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 SOX4Q06945 474 aaPredicted RBP4.51□□□□□ -1.69
CTSC-208ENST00000533897 BST2Q10589 180 aaKnown RBP4.51□□□□□ -1.69
CTSC-208ENST00000533897 USP4Q13107 963 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 IHHQ14623 411 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 C1orf146Q5VVC0 180 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 PM20D1Q6GTS8 502 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 ARPINQ7Z6K5 226 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 ZC3HC1Q86WB0 502 aaKnown RBP4.51□□□□□ -1.69
CTSC-208ENST00000533897 OSTM1Q86WC4 334 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 MAP7D3Q8IWC1 876 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 PQLC1Q8N2U9 271 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 HDAC11Q96DB2 347 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 MOCOSQ96EN8 888 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 HSFY1Q96LI6 401 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 SLC9A7Q96T83 725 aa4.51□□□□□ -1.69
CTSC-208ENST00000533897 GPATCH1Q9BRR8 931 aaKnown RBP4.51□□□□□ -1.69
CTSC-208ENST00000533897 GATA5Q9BWX5 397 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms