RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 TEX15Q9BXT5 2789 aa9.92□□□□□ -0.82
CHKA-207ENST00000533728 MYBPHLA2RUH7 354 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 CLDN5O00501 218 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 PITPNM1O00562 1244 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 NRP1O14786 923 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 CAPN9O14815 690 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 MBTPS2O43462 519 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 MFSD11O43934 449 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 HNRNPCL1O60812 293 aaKnown RBP9.91□□□□□ -0.82
CHKA-207ENST00000533728 METTL18O95568 372 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 IGLV3-25P01717 112 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 ATP5BP06576 529 aaKnown RBP9.91□□□□□ -0.82
CHKA-207ENST00000533728 ACAT1P24752 427 aaKnown RBP9.91□□□□□ -0.82
CHKA-207ENST00000533728 ETV4P43268 484 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 SCNN1GP51170 649 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 CCL23P55773 120 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 COG7P83436 770 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 NRG1Q02297 640 aaPredicted RBP9.91□□□□□ -0.82
CHKA-207ENST00000533728 GALNT2Q10471 571 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 EIF4EBP2Q13542 120 aaPredicted RBP9.91□□□□□ -0.82
CHKA-207ENST00000533728 EFTUD2Q15029 972 aaKnown RBP eCLIP9.91□□□□□ -0.829e-8■□□□□ 9.2
CHKA-207ENST00000533728 TIGD5Q53EQ6 642 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 BRMS1LQ5PSV4 323 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 SYPL2Q5VXT5 272 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 ITPRIPL1Q6GPH6 555 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 CGB2Q6NT52 195 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 UNC5AQ6ZN44 842 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 C4orf50Q6ZRC1 276 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 BHLHA9Q7RTU4 235 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 ZNF598Q86UK7 904 aaKnown RBP9.91□□□□□ -0.82
CHKA-207ENST00000533728 C4orf33Q8N1A6 199 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 AGGF1Q8N302 714 aaeCLIP9.91□□□□□ -0.82
CHKA-207ENST00000533728 ZNF276Q8N554 614 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 DCLK2Q8N568 766 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 LZTR1Q8N653 840 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 MAGEC3Q8TD91 643 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 ZNF75CPQ92670 426 aaPredicted RBP9.91□□□□□ -0.82
CHKA-207ENST00000533728 CDKL2Q92772 493 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 MYLPFQ96A32 169 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 STAMBPL1Q96FJ0 436 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 EPAS1Q99814 870 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 RTP3Q9BQQ7 232 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 AGO3Q9H9G7 860 aaKnown RBP9.91□□□□□ -0.82
CHKA-207ENST00000533728 PIGVQ9NUD9 493 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.91□□□□□ -0.82
CHKA-207ENST00000533728 CDV3Q9UKY7 258 aaKnown RBP9.91□□□□□ -0.82
CHKA-207ENST00000533728 ZMIZ1Q9ULJ6 1067 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 PHTF1Q9UMS5 762 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 PCDHB8Q9UN66 801 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 CHD5Q8TDI0 1954 aa9.91□□□□□ -0.82
CHKA-207ENST00000533728 NYNRINQ9P2P1 1898 aaKnown RBP9.91□□□□□ -0.82
CHKA-207ENST00000533728 MAGEB16A2A368 324 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 YJEFN3A6XGL0 299 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 MEIS3P2A8K0S8 358 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 ANKRD65E5RJM6 399 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 E7ENQ6 273 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 RNF103O00237 685 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 C2CD2LO14523 706 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 BIRC5O15392 142 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 TROVE2P10155 538 aaKnown RBP eCLIP9.9□□□□□ -0.82
CHKA-207ENST00000533728 CCNB1P14635 433 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 PGAM1P18669 254 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 HOXC13P31276 330 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 THPOP40225 353 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 NDUFV1P49821 464 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 TPI1P60174 286 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 TSPY1Q01534 308 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 WASHC5Q12768 1159 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 RIPK1Q13546 671 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 LPIN1Q14693 890 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 SETDB1Q15047 1291 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 SPANXN3Q5MJ09 141 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 FYB2Q5VWT5 728 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 CD300LGQ6UXG3 332 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 CAPN12Q6ZSI9 719 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 PACS2Q86VP3 889 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 ECHDC2Q86YB7 292 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 LRRC49Q8IUZ0 686 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 HERC6Q8IVU3 1022 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 COLGALT1Q8NBJ5 622 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 C3orf58Q8NDZ4 430 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 SLC7A14Q8TBB6 771 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 PHOSPHO2Q8TCD6 241 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 TCP10LQ8TDR4 215 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 PPP1R13LQ8WUF5 828 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 RSPH1Q8WYR4 309 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 CFAP36Q96G28 342 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 P2RY11Q96G91 374 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 TSGA13Q96PP4 275 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 HAPLN3Q96S86 360 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 RTKNQ9BST9 563 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 TUBB6Q9BUF5 446 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 COLEC11Q9BWP8 271 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 HIPK3Q9H422 1215 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 KIF9Q9HAQ2 790 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 SLC40A1Q9NP59 571 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 RGS18Q9NS28 235 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 ARHGEF38Q9NXL2 777 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 CLDND1Q9NY35 253 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 KANSL3Q9P2N6 904 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms