RNA–Protein interactions for RNA: ENST00000533644.5

BBS1-223, Transcript of Bardet-Biedl syndrome 1, human

TSL 3

Gene BBS1, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-223	ENST00000533644	CALB1	P05937	261 aa		18.17	■□□□□ 0.5
BBS1-223	ENST00000533644	CSRP1	P21291	193 aa	Known RBP	18.17	■□□□□ 0.5
BBS1-223	ENST00000533644	NNMT	P40261	264 aa		18.17	■□□□□ 0.5
BBS1-223	ENST00000533644	NUMB	P49757	651 aa		18.17	■□□□□ 0.5
BBS1-223	ENST00000533644	ATP11A	P98196	1134 aa		18.17	■□□□□ 0.5
BBS1-223	ENST00000533644	C15orf59	Q2T9L4	293 aa	Predicted RBP	18.17	■□□□□ 0.5
BBS1-223	ENST00000533644	RAB6C	Q53S08	254 aa		18.17	■□□□□ 0.5
BBS1-223	ENST00000533644	LRRC31	Q6UY01	552 aa		18.17	■□□□□ 0.5
BBS1-223	ENST00000533644	MON1B	Q7L1V2	547 aa		18.17	■□□□□ 0.5
BBS1-223	ENST00000533644	STRADA	Q7RTN6	431 aa		18.17	■□□□□ 0.5
BBS1-223	ENST00000533644	PHLDB2	Q86SQ0	1253 aa		18.17	■□□□□ 0.5
BBS1-223	ENST00000533644	SETD3	Q86TU7	594 aa	Predicted RBP	18.17	■□□□□ 0.5
BBS1-223	ENST00000533644	MMAA	Q8IVH4	418 aa	Known RBP	18.17	■□□□□ 0.5
BBS1-223	ENST00000533644	ZCCHC9	Q8N567	271 aa	Known RBP	18.17	■□□□□ 0.5
BBS1-223	ENST00000533644	C3orf20	Q8ND61	904 aa		18.17	■□□□□ 0.5
BBS1-223	ENST00000533644	CENPI	Q92674	756 aa	Predicted RBP	18.17	■□□□□ 0.5
BBS1-223	ENST00000533644	RAB6C	Q9H0N0	254 aa		18.17	■□□□□ 0.5
BBS1-223	ENST00000533644	SERGEF	Q9UGK8	458 aa		18.17	■□□□□ 0.5
BBS1-223	ENST00000533644	CHD8	Q9HCK8	2581 aa		18.17	■□□□□ 0.5
BBS1-223	ENST00000533644		A0A1B0GTH6	734 aa		18.16	■□□□□ 0.5
BBS1-223	ENST00000533644		A0A1W2PQC6	194 aa		18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	TCRBV5S1A1T	A0A578	114 aa		18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	C10orf142	B7Z368	130 aa		18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	MID1	O15344	667 aa		18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	RHOC	P08134	193 aa		18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	SYP	P08247	313 aa		18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	CCDC172	P0C7W6	258 aa		18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	KRT3	P12035	628 aa		18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	VAV1	P15498	845 aa		18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	C1QBP	Q07021	282 aa	Known RBP	18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	SFSWAP	Q12872	951 aa	Known RBP	18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	UAP1L1	Q3KQV9	507 aa		18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	SH3PXD2A	Q5TCZ1	1133 aa		18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	IRF2BP2	Q7Z5L9	587 aa		18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	STK40	Q8N2I9	435 aa		18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	PSMB7	Q99436	277 aa		18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	GTPBP2	Q9BX10	602 aa	Known RBP	18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	FBXL12	Q9NXK8	326 aa		18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	MPP6	Q9NZW5	540 aa		18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	ADAMTS1	Q9UHI8	967 aa		18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	EIF2B4	Q9UI10	523 aa	Known RBP	18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	SLC25A13	Q9UJS0	675 aa		18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	FZD4	Q9ULV1	537 aa		18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	HS3ST2	Q9Y278	367 aa		18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	NCKAP1	Q9Y2A7	1128 aa		18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	ASCC3	Q8N3C0	2202 aa	Known RBP	18.16	■□□□□ 0.5
BBS1-223	ENST00000533644	ADAMTS9	Q9P2N4	1935 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	DOCK4	Q8N1I0	1966 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	UPK3BL1	B0FP48	263 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	UPK3BL2	E5RIL1	263 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	BCAT2	O15382	392 aa	Predicted RBP	18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	ADH1B	P00325	375 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	C5AR1	P21730	350 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	SLC8A1	P32418	973 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	RFC1	P35251	1148 aa	Predicted RBP	18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	ADRA1B	P35368	520 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	PSMD8	P48556	350 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	NOVA1	P51513	510 aa	Known RBP	18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	ATXN3	P54252	364 aa	Predicted RBP	18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	NRG1	Q02297	640 aa	Predicted RBP	18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	GRIK2	Q13002	908 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	SEMA3B	Q13214	749 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	CDO1	Q16878	200 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	FILIP1L	Q4L180	1135 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	C6orf118	Q5T5N4	469 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	MANEAL	Q5VSG8	457 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	PSAPL1	Q6NUJ1	521 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	TFAP2D	Q7Z6R9	452 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	SH2D3C	Q8N5H7	860 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	MINDY1	Q8N5J2	469 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	AADAT	Q8N5Z0	425 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	DCAF4L2	Q8NA75	395 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	BIRC7	Q96CA5	298 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	C2orf49	Q9BVC5	232 aa	Predicted RBP	18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	ZDHHC5	Q9C0B5	715 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	MUC3B	Q9H195	1237 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	MIR1-1HG	Q9H1L0	117 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	OSGEP	Q9NPF4	335 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	SEPT11	Q9NVA2	429 aa	Known RBP	18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	DNAAF2	Q9NVR5	837 aa	Known RBP	18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	PPARGC1A	Q9UBK2	798 aa	Known RBP	18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	VPS51	Q9UID3	782 aa		18.15	■□□□□ 0.5
BBS1-223	ENST00000533644	MAP1B	P46821	2468 aa	Known RBP	18.14	■□□□□ 0.5
BBS1-223	ENST00000533644		A0A1W2PP55	124 aa		18.14	■□□□□ 0.49
BBS1-223	ENST00000533644	SYCE3	A1L190	88 aa		18.14	■□□□□ 0.49
BBS1-223	ENST00000533644	SIGLEC16	A6NMB1	481 aa		18.14	■□□□□ 0.49
BBS1-223	ENST00000533644	GJB3	O75712	270 aa		18.14	■□□□□ 0.49
BBS1-223	ENST00000533644	IGHV4-34	P06331	123 aa		18.14	■□□□□ 0.49
BBS1-223	ENST00000533644	GPD1	P21695	349 aa		18.14	■□□□□ 0.49
BBS1-223	ENST00000533644	KCNA4	P22459	653 aa		18.14	■□□□□ 0.49
BBS1-223	ENST00000533644	HDAC4	P56524	1084 aa		18.14	■□□□□ 0.49
BBS1-223	ENST00000533644	KRT83	P78385	493 aa		18.14	■□□□□ 0.49
BBS1-223	ENST00000533644	PPP1R15B	Q5SWA1	713 aa		18.14	■□□□□ 0.49
BBS1-223	ENST00000533644	ZNF783	Q6ZMS7	281 aa		18.14	■□□□□ 0.49
BBS1-223	ENST00000533644	OR2I1P	Q8NGU4	316 aa		18.14	■□□□□ 0.49
BBS1-223	ENST00000533644	GANC	Q8TET4	914 aa		18.14	■□□□□ 0.49
BBS1-223	ENST00000533644	FAM172A	Q8WUF8	416 aa		18.14	■□□□□ 0.49
BBS1-223	ENST00000533644	FAM131C	Q96AQ9	280 aa		18.14	■□□□□ 0.49
BBS1-223	ENST00000533644	NAP1L5	Q96NT1	182 aa	Predicted RBP	18.14	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms