RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 BAZ2AQ9UIF9 1905 aaKnown RBP12.46□□□□□ -0.42
BDNF-218ENST00000533246 FAM208AQ9UK61 1670 aaKnown RBP12.46□□□□□ -0.42
BDNF-218ENST00000533246 A8MUI8 341 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 NR5A2O00482 541 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 FBXO21O94952 628 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 ITGAVP06756 1048 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 HSPA1AP0DMV8 641 aaKnown RBP12.46□□□□□ -0.42
BDNF-218ENST00000533246 HSPA1BP0DMV9 641 aaKnown RBP12.46□□□□□ -0.42
BDNF-218ENST00000533246 NPR3P17342 541 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 NFKB1P19838 968 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 HOXD11P31277 338 aaPredicted RBP12.46□□□□□ -0.42
BDNF-218ENST00000533246 SLC11A2P49281 568 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 RTP1P59025 263 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 TEDDM1Q5T9Z0 273 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 MON1BQ7L1V2 547 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 SNX32Q86XE0 403 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 NMRAL1Q9HBL8 299 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 TELO2Q9Y4R8 837 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 CASZ1Q86V15 1759 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 A0A0A0MRY4 1105 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 NOTOA8MTQ0 251 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 MYO1GB0I1T2 1018 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 PLA2G6O60733 806 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 TRIM16LQ309B1 348 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 TMEM214Q6NUQ4 689 aaKnown RBP12.45□□□□□ -0.42
BDNF-218ENST00000533246 POTEAQ6S8J7 498 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 HEATR4Q86WZ0 1026 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 PYROXD2Q8N2H3 581 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 CARNMT1Q8N4J0 409 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 ANKRD52Q8NB46 1076 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 DNAJC1Q96KC8 554 aaKnown RBP12.45□□□□□ -0.42
BDNF-218ENST00000533246 EXOC2Q96KP1 924 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 SPATA13Q96N96 652 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 CDRT15Q96T59 188 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 CAB39LQ9H9S4 337 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 GRHL1Q9NZI5 618 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 VPS28Q9UK41 221 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 PCDHGA3Q9Y5H0 932 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 SNX5Q9Y5X3 404 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 KCPQ6ZWJ8 1503 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 BOLA2-SMG1P6H3BVE0 249 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 USP2O75604 605 aaPredicted RBP12.45□□□□□ -0.42
BDNF-218ENST00000533246 GUCA1CO95843 209 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 FCGRTP55899 365 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 NAA20P61599 178 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 STX5Q13190 355 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 PDK4Q16654 411 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 IQSEC1Q6DN90 963 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 PLPPR4Q7Z2D5 763 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 TMPRSS6Q8IU80 811 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 PCDH20Q8N6Y1 951 aaKnown RBP12.45□□□□□ -0.42
BDNF-218ENST00000533246 PAIP1Q9H074 479 aaKnown RBP12.45□□□□□ -0.42
BDNF-218ENST00000533246 NMRK2Q9NPI5 230 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 XPNPEP3Q9NQH7 507 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 NSMCE4AQ9NXX6 385 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 TRMT6Q9UJA5 497 aaKnown RBP12.45□□□□□ -0.42
BDNF-218ENST00000533246 PCDHGB4Q9UN71 923 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 TMEM98Q9Y2Y6 226 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 GPC6Q9Y625 555 aaPredicted RBP12.45□□□□□ -0.42
BDNF-218ENST00000533246 KIF1AQ12756 1690 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 PRR23AA6NEV1 266 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 F8W8V4 182 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 RAMP2O60895 175 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 SH3BGRLO75368 114 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 KATNA1O75449 491 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 UNC5CO95185 931 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 CYBBP04839 570 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 SLC2A3P11169 496 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 TBX4P57082 545 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 PTK2BQ14289 1009 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 INPP5AQ14642 412 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 ACAP1Q15027 740 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 ADCK2Q7Z695 626 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 DDI1Q8WTU0 396 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 STK32AQ8WU08 396 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 RNPEPL1Q9HAU8 725 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 SFMBT1Q9UHJ3 866 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 LSM7Q9UK45 103 aaKnown RBP12.45□□□□□ -0.42
BDNF-218ENST00000533246 SOX13Q9UN79 622 aa12.45□□□□□ -0.42
BDNF-218ENST00000533246 NT5C1B-RDH14C9J2C7 533 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 E7ENQ6 273 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 ALDH2P05091 517 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 VAV1P15498 845 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 CDKN2BP42772 138 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 KCNK10P57789 538 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 NFE2Q16621 373 aaPredicted RBP12.44□□□□□ -0.42
BDNF-218ENST00000533246 FNBP1LQ5T0N5 605 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 BNC2Q6ZN30 1099 aaPredicted RBP12.44□□□□□ -0.42
BDNF-218ENST00000533246 UTS2BQ765I0 119 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 GPR142Q7Z601 462 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 ALYREFQ86V81 257 aaKnown RBP12.44□□□□□ -0.42
BDNF-218ENST00000533246 ZNF410Q86VK4 478 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 GLIS1Q8NBF1 620 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 CPT1BQ92523 772 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 P2RY11Q96G91 374 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 SMARCD1Q96GM5 515 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 MPP6Q9NZW5 540 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 NDUFA13Q9P0J0 144 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 ABLIM1O14639 778 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 TRDMT1O14717 391 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms