RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 DUSP15Q9H1R2 295 aaPredicted RBP14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 TMEM248Q9NWD8 314 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 PCSK1NQ9UHG2 260 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 NYNRINQ9P2P1 1898 aaKnown RBP14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 WASH4PA8MWX3 477 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 SNAP91O60641 907 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 MOCS3O95396 460 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 CD160O95971 181 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 MT-CO1P00395 513 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 RHOCP08134 193 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 TMEM253P0C7T8 217 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 TGM1P22735 817 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 OR1E1P30953 314 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 SULT2A1Q06520 285 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 PIGHQ14442 188 aaPredicted RBP14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 PLK5Q496M5 336 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 EFHC2Q5JST6 749 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 ERMARDQ5T6L9 678 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 ZNF783Q6ZMS7 281 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 TMPRSS6Q8IU80 811 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 FAM160A2Q8N612 972 aaPredicted RBP14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 TBC1D31Q96DN5 1066 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 PANX2Q96RD6 677 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 KCTD15Q96SI1 283 aaPredicted RBP14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 FAM129BQ96TA1 746 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 SUN2Q9UH99 717 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 VPS51Q9UID3 782 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 ANAPC7Q9UJX3 599 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 USP18Q9UMW8 372 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 AP4E1Q9UPM8 1137 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 SMG5Q9UPR3 1016 aaKnown RBP14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 RALGAPA1Q6GYQ0 2036 aa14.3□□□□□ -0.12
TSPAN4-220ENST00000532375 TNRC6BQ9UPQ9 1833 aaKnown RBP14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 GVINP1Q7Z2Y8 2422 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 ATP9BO43861 1147 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 GFRA3O60609 400 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 SIN3BO75182 1162 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 ZNF821O75541 412 aaPredicted RBP14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 RNF8O76064 485 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 GLDCP23378 1020 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 CDC25BP30305 580 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 ACVRL1P37023 503 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 MAPKAPK2P49137 400 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 SLC25A11Q02978 314 aaKnown RBP14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 GNA12Q03113 381 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 STARD3Q14849 445 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 TCEAL1Q15170 157 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 LPAL2Q16609 132 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 USP39Q53GS9 565 aaKnown RBP14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 C6orf118Q5T5N4 469 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 PSTKQ8IV42 348 aaKnown RBP14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 DCLK2Q8N568 766 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 RTL3Q8N8U3 475 aaKnown RBP14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 OR2T3Q8NH03 318 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 ZNF564Q8TBZ8 553 aaPredicted RBP14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 PPP1R9BQ96SB3 815 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 ANP32EQ9BTT0 268 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 KLC2Q9H0B6 622 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 DEF6Q9H4E7 631 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 PRDM16Q9HAZ2 1276 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 OSGEPQ9NPF4 335 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 ITM2CQ9NQX7 267 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 USP36Q9P275 1121 aaKnown RBP14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 UVRAGQ9P2Y5 699 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 IP6K2Q9UHH9 426 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 VPS28Q9UK41 221 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 HS3ST2Q9Y278 367 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 ZNF292O60281 2723 aa14.29□□□□□ -0.12
TSPAN4-220ENST00000532375 IGHV1OR15-9A0A0B4J2B8 117 aa14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 TARSL2A2RTX5 802 aaKnown RBP14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 EIF3CLB5ME19 914 aaKnown RBP14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 K7ERQ8 282 aa14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 SMAD6O43541 496 aaKnown RBP14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 SYNCRIPO60506 623 aaKnown RBP14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 MTA2O94776 668 aa14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 IGLV3-19P01714 112 aa14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 RARAP10276 462 aa14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 SRCP12931 536 aa14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 VAV1P15498 845 aa14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 EPHB2P29323 1055 aa14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 RPS14P62263 151 aaKnown RBP14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 ARF5P84085 180 aa14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 BOLA3Q53S33 107 aa14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 RWDD4Q6NW29 188 aaKnown RBP14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 PRR23BQ6ZRT6 265 aa14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 TMEM139Q8IV31 216 aa14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 PGBD3Q8N328 593 aa14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 SH2D3CQ8N5H7 860 aa14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 DCAF4L2Q8NA75 395 aa14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 SLC35G2Q8TBE7 412 aa14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 FAM71BQ8TC56 605 aa14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 ARHGEF2Q92974 986 aaKnown RBP14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 VOPP1Q96AW1 172 aa14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 EIF3CQ99613 913 aaKnown RBP14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 NCAPGQ9BPX3 1015 aa14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 MUC3BQ9H195 1237 aa14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 RSPH9Q9H1X1 276 aaPredicted RBP14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 DHX35Q9H5Z1 703 aaKnown RBP14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 BCCIPQ9P287 314 aaKnown RBP eCLIP14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 DNAI1Q9UI46 699 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms