RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 FAM180BQ6P0A1 224 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 DENND1BQ6P3S1 775 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 KIAA1324Q6UXG2 1013 aaKnown RBP5.05□□□□□ -1.6
C11orf88-204ENST00000529661 ZNF793Q6ZN11 406 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 MRPL10Q7Z7H8 261 aaKnown RBP5.05□□□□□ -1.6
C11orf88-204ENST00000529661 TBC1D1Q86TI0 1168 aaPredicted RBP5.05□□□□□ -1.6
C11orf88-204ENST00000529661 ZNF366Q8N895 744 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 STAMQ92783 540 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 COQ8BQ96D53 544 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 HMCESQ96FZ2 354 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 RBM17Q96I25 401 aaKnown RBP5.05□□□□□ -1.6
C11orf88-204ENST00000529661 RNF26Q9BY78 433 aaPredicted RBP5.05□□□□□ -1.6
C11orf88-204ENST00000529661 IL21RQ9HBE5 538 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 PDE11AQ9HCR9 933 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 SMC4Q9NTJ3 1288 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 SWAP70Q9UH65 585 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 TBX20Q9UMR3 447 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 CYP46A1Q9Y6A2 500 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 SIRT4Q9Y6E7 314 aaPredicted RBP5.05□□□□□ -1.6
C11orf88-204ENST00000529661 C3orf70A6NLC5 250 aaPredicted RBP5.04□□□□□ -1.6
C11orf88-204ENST00000529661 SOCS2O14508 198 aa5.04□□□□□ -1.6
C11orf88-204ENST00000529661 PRYO14603 147 aa5.04□□□□□ -1.6
C11orf88-204ENST00000529661 DHX16O60231 1041 aaKnown RBP5.04□□□□□ -1.6
C11orf88-204ENST00000529661 BAIAP3O94812 1187 aa5.04□□□□□ -1.6
C11orf88-204ENST00000529661 CD63P08962 238 aa5.04□□□□□ -1.6
C11orf88-204ENST00000529661 CSF1P09603 554 aa5.04□□□□□ -1.6
C11orf88-204ENST00000529661 HNRNPA1P09651 372 aaKnown RBP eCLIP5.04□□□□□ -1.6
C11orf88-204ENST00000529661 IFIT1P09914 478 aaKnown RBP5.04□□□□□ -1.6
C11orf88-204ENST00000529661 CTSAP10619 480 aa5.04□□□□□ -1.6
C11orf88-204ENST00000529661 PRF1P14222 555 aa5.04□□□□□ -1.6
C11orf88-204ENST00000529661 ST6GAL1P15907 406 aa5.04□□□□□ -1.6
C11orf88-204ENST00000529661 PSMC2P35998 433 aaKnown RBP5.04□□□□□ -1.6
C11orf88-204ENST00000529661 NR4A2P43354 598 aa5.04□□□□□ -1.6
C11orf88-204ENST00000529661 AGTR2P50052 363 aa5.04□□□□□ -1.6
C11orf88-204ENST00000529661 CASP6P55212 293 aa5.04□□□□□ -1.6
C11orf88-204ENST00000529661 TAS2R50P59544 299 aa5.04□□□□□ -1.6
C11orf88-204ENST00000529661 RNASELQ05823 741 aaKnown RBP5.04□□□□□ -1.6
C11orf88-204ENST00000529661 THOC5Q13769 683 aaKnown RBP5.04□□□□□ -1.6
C11orf88-204ENST00000529661 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.04□□□□□ -1.6
C11orf88-204ENST00000529661 LAS2Q8IYD9 372 aa5.04□□□□□ -1.6
C11orf88-204ENST00000529661 TCP11L2Q8N4U5 519 aa5.04□□□□□ -1.6
C11orf88-204ENST00000529661 ANKRD44Q8N8A2 993 aa5.04□□□□□ -1.6
C11orf88-204ENST00000529661 NRACQ8N912 160 aa5.04□□□□□ -1.6
C11orf88-204ENST00000529661 ZBTB9Q96C00 473 aa5.04□□□□□ -1.6
C11orf88-204ENST00000529661 MASTLQ96GX5 879 aa5.04□□□□□ -1.6
C11orf88-204ENST00000529661 TMEM79Q9BSE2 394 aa5.04□□□□□ -1.6
C11orf88-204ENST00000529661 OSBPL5Q9H0X9 879 aaPredicted RBP5.04□□□□□ -1.6
C11orf88-204ENST00000529661 TAOK3Q9H2K8 898 aa5.04□□□□□ -1.6
C11orf88-204ENST00000529661 SLC22A11Q9NSA0 550 aa5.04□□□□□ -1.6
C11orf88-204ENST00000529661 COPG1Q9Y678 874 aaKnown RBP5.04□□□□□ -1.6
C11orf88-204ENST00000529661 FNDC1Q4ZHG4 1894 aaPredicted RBP5.04□□□□□ -1.6
C11orf88-204ENST00000529661 SLC22A23A1A5C7 686 aa5.03□□□□□ -1.6
C11orf88-204ENST00000529661 C2CD4BA6NLJ0 364 aa5.03□□□□□ -1.6
C11orf88-204ENST00000529661 F5H0A9 414 aaPredicted RBP5.03□□□□□ -1.6
C11orf88-204ENST00000529661 TLR2O60603 784 aa5.03□□□□□ -1.6
C11orf88-204ENST00000529661 DDX58O95786 925 aaKnown RBP5.03□□□□□ -1.6
C11orf88-204ENST00000529661 SLC8A1P32418 973 aa5.03□□□□□ -1.6
C11orf88-204ENST00000529661 HOXD12P35452 270 aa5.03□□□□□ -1.6
C11orf88-204ENST00000529661 IDUAP35475 653 aa5.03□□□□□ -1.6
C11orf88-204ENST00000529661 PGM1P36871 562 aa5.03□□□□□ -1.6
C11orf88-204ENST00000529661 CCT4P50991 539 aaKnown RBP5.03□□□□□ -1.6
C11orf88-204ENST00000529661 TBL3Q12788 808 aaKnown RBP5.03□□□□□ -1.6
C11orf88-204ENST00000529661 LIPMQ5VYY2 423 aa5.03□□□□□ -1.6
C11orf88-204ENST00000529661 ACAD10Q6JQN1 1059 aa5.03□□□□□ -1.6
C11orf88-204ENST00000529661 TMEM88Q6PEY1 159 aa5.03□□□□□ -1.6
C11orf88-204ENST00000529661 SLC39A5Q6ZMH5 540 aa5.03□□□□□ -1.6
C11orf88-204ENST00000529661 SYNE3Q6ZMZ3 975 aa5.03□□□□□ -1.6
C11orf88-204ENST00000529661 LRRC8DQ7L1W4 858 aa5.03□□□□□ -1.6
C11orf88-204ENST00000529661 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.03□□□□□ -1.6
C11orf88-204ENST00000529661 UEVLDQ8IX04 471 aa5.03□□□□□ -1.6
C11orf88-204ENST00000529661 SRFBP1Q8NEF9 429 aaKnown RBP5.03□□□□□ -1.6
C11orf88-204ENST00000529661 CELF1Q92879 486 aaKnown RBP5.03□□□□□ -1.6
C11orf88-204ENST00000529661 ZUFSPQ96AP4 578 aa5.03□□□□□ -1.6
C11orf88-204ENST00000529661 RNF125Q96EQ8 232 aa5.03□□□□□ -1.6
C11orf88-204ENST00000529661 PHF7Q9BWX1 381 aaPredicted RBP5.03□□□□□ -1.6
C11orf88-204ENST00000529661 MLXIPLQ9NP71 852 aa5.03□□□□□ -1.6
C11orf88-204ENST00000529661 IRAK4Q9NWZ3 460 aa5.03□□□□□ -1.6
C11orf88-204ENST00000529661 CD207Q9UJ71 328 aa5.03□□□□□ -1.6
C11orf88-204ENST00000529661 B3GNT3Q9Y2A9 372 aa5.03□□□□□ -1.6
C11orf88-204ENST00000529661 SCINQ9Y6U3 715 aa5.03□□□□□ -1.6
C11orf88-204ENST00000529661 ZMYM2Q9UBW7 1377 aa5.03□□□□□ -1.6
C11orf88-204ENST00000529661 A0A087X0M5 115 aa5.02□□□□□ -1.61
C11orf88-204ENST00000529661 A0A1B0GX30 115 aa5.02□□□□□ -1.61
C11orf88-204ENST00000529661 GRM8O00222 908 aa5.02□□□□□ -1.61
C11orf88-204ENST00000529661 USP12O75317 370 aa5.02□□□□□ -1.61
C11orf88-204ENST00000529661 ALDOAP04075 364 aaKnown RBP5.02□□□□□ -1.61
C11orf88-204ENST00000529661 RPS6KB1P23443 525 aa5.02□□□□□ -1.61
C11orf88-204ENST00000529661 HOXA7P31268 230 aaPredicted RBP5.02□□□□□ -1.61
C11orf88-204ENST00000529661 CDK18Q07002 472 aa5.02□□□□□ -1.61
C11orf88-204ENST00000529661 CAMK1Q14012 370 aa5.02□□□□□ -1.61
C11orf88-204ENST00000529661 GPR162Q16538 588 aa5.02□□□□□ -1.61
C11orf88-204ENST00000529661 ZNF260Q3ZCT1 412 aa5.02□□□□□ -1.61
C11orf88-204ENST00000529661 MZT2BQ6NZ67 158 aa5.02□□□□□ -1.61
C11orf88-204ENST00000529661 DSTYKQ6XUX3 929 aa5.02□□□□□ -1.61
C11orf88-204ENST00000529661 RBM44Q6ZP01 1051 aaKnown RBP5.02□□□□□ -1.61
C11orf88-204ENST00000529661 Q8N9P0 234 aaPredicted RBP5.02□□□□□ -1.61
C11orf88-204ENST00000529661 LSM14AQ8ND56 463 aaKnown RBP5.02□□□□□ -1.61
C11orf88-204ENST00000529661 ZBTB10Q96DT7 871 aa5.02□□□□□ -1.61
C11orf88-204ENST00000529661 APOPT1Q96IL0 206 aa5.02□□□□□ -1.61
C11orf88-204ENST00000529661 FUZQ9BT04 418 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms