RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 C2orf49Q9BVC5 232 aaPredicted RBP33.94■■■■□ 3.02
SSSCA1-205ENST00000527920 SELENOOQ9BVL4 669 aa33.94■■■■□ 3.02
SSSCA1-205ENST00000527920 EDEM3Q9BZQ6 932 aa33.94■■■■□ 3.02
SSSCA1-205ENST00000527920 PPARGC1AQ9UBK2 798 aaKnown RBP33.94■■■■□ 3.02
SSSCA1-205ENST00000527920 NCKAP1Q9Y2A7 1128 aa33.94■■■■□ 3.02
SSSCA1-205ENST00000527920 CACNA1EQ15878 2313 aa33.94■■■■□ 3.02
SSSCA1-205ENST00000527920 A0A1B0GTW7 788 aa33.93■■■■□ 3.02
SSSCA1-205ENST00000527920 SEMA4FO95754 770 aa33.93■■■■□ 3.02
SSSCA1-205ENST00000527920 RHOCP08134 193 aa33.93■■■■□ 3.02
SSSCA1-205ENST00000527920 SYPP08247 313 aa33.93■■■■□ 3.02
SSSCA1-205ENST00000527920 RFC1P35251 1148 aaPredicted RBP33.93■■■■□ 3.02
SSSCA1-205ENST00000527920 ADRA1BP35368 520 aa33.93■■■■□ 3.02
SSSCA1-205ENST00000527920 KRT83P78385 493 aa33.93■■■■□ 3.02
SSSCA1-205ENST00000527920 C15orf59Q2T9L4 293 aaPredicted RBP33.93■■■■□ 3.02
SSSCA1-205ENST00000527920 C6orf118Q5T5N4 469 aa33.93■■■■□ 3.02
SSSCA1-205ENST00000527920 ZNF783Q6ZMS7 281 aa33.93■■■■□ 3.02
SSSCA1-205ENST00000527920 NAP1L5Q96NT1 182 aaPredicted RBP33.93■■■■□ 3.02
SSSCA1-205ENST00000527920 MUC3BQ9H195 1237 aa33.93■■■■□ 3.02
SSSCA1-205ENST00000527920 RETREG1Q9H6L5 497 aa33.93■■■■□ 3.02
SSSCA1-205ENST00000527920 CBX8Q9HC52 389 aa33.93■■■■□ 3.02
SSSCA1-205ENST00000527920 HS3ST2Q9Y278 367 aa33.93■■■■□ 3.02
SSSCA1-205ENST00000527920 ARHGAP33O14559 1287 aa33.92■■■■□ 3.02
SSSCA1-205ENST00000527920 TPM4P67936 248 aa33.92■■■■□ 3.02
SSSCA1-205ENST00000527920 NR1I3Q14994 352 aa33.92■■■■□ 3.02
SSSCA1-205ENST00000527920 CDO1Q16878 200 aa33.92■■■■□ 3.02
SSSCA1-205ENST00000527920 ACAD10Q6JQN1 1059 aa33.92■■■■□ 3.02
SSSCA1-205ENST00000527920 LRSAM1Q6UWE0 723 aa33.92■■■■□ 3.02
SSSCA1-205ENST00000527920 DCAF4L2Q8NA75 395 aa33.92■■■■□ 3.02
SSSCA1-205ENST00000527920 VCPIP1Q96JH7 1222 aa33.92■■■■□ 3.02
SSSCA1-205ENST00000527920 ZYG11BQ9C0D3 744 aa33.92■■■■□ 3.02
SSSCA1-205ENST00000527920 TTYH3Q9C0H2 523 aa33.92■■■■□ 3.02
SSSCA1-205ENST00000527920 FBXL12Q9NXK8 326 aa33.92■■■■□ 3.02
SSSCA1-205ENST00000527920 AIPL1Q9NZN9 384 aa33.92■■■■□ 3.02
SSSCA1-205ENST00000527920 MPP6Q9NZW5 540 aa33.92■■■■□ 3.02
SSSCA1-205ENST00000527920 ZNF212Q9UDV6 495 aa33.92■■■■□ 3.02
SSSCA1-205ENST00000527920 ADAMTS1Q9UHI8 967 aa33.92■■■■□ 3.02
SSSCA1-205ENST00000527920 FZD4Q9ULV1 537 aa33.92■■■■□ 3.02
SSSCA1-205ENST00000527920 ZBTB32Q9Y2Y4 487 aaPredicted RBP33.92■■■■□ 3.02
SSSCA1-205ENST00000527920 PCDH15Q96QU1 1955 aa33.91■■■■□ 3.02
SSSCA1-205ENST00000527920 LRRC53A6NM62 1247 aa33.91■■■■□ 3.02
SSSCA1-205ENST00000527920 GJB6O95452 261 aa33.91■■■■□ 3.02
SSSCA1-205ENST00000527920 ADH1BP00325 375 aa33.91■■■■□ 3.02
SSSCA1-205ENST00000527920 SERPINC1P01008 464 aa33.91■■■■□ 3.02
SSSCA1-205ENST00000527920 MAOBP27338 520 aa33.91■■■■□ 3.02
SSSCA1-205ENST00000527920 ATXN3P54252 364 aaPredicted RBP33.91■■■■□ 3.02
SSSCA1-205ENST00000527920 FIGNQ5HY92 759 aa33.91■■■■□ 3.02
SSSCA1-205ENST00000527920 DNAJC24Q6P3W2 148 aa33.91■■■■□ 3.02
SSSCA1-205ENST00000527920 WDR59Q6PJI9 974 aa33.91■■■■□ 3.02
SSSCA1-205ENST00000527920 MMAAQ8IVH4 418 aaKnown RBP33.91■■■■□ 3.02
SSSCA1-205ENST00000527920 STK40Q8N2I9 435 aa33.91■■■■□ 3.02
SSSCA1-205ENST00000527920 NTAN1Q96AB6 310 aa33.91■■■■□ 3.02
SSSCA1-205ENST00000527920 ZDHHC5Q9C0B5 715 aa33.91■■■■□ 3.02
SSSCA1-205ENST00000527920 OSBPL2Q9H1P3 480 aa33.91■■■■□ 3.02
SSSCA1-205ENST00000527920 C6orf106Q9H6K1 298 aaPredicted RBP33.91■■■■□ 3.02
SSSCA1-205ENST00000527920 ILVBLA1L0T0 632 aa33.9■■■■□ 3.02
SSSCA1-205ENST00000527920 MID1O15344 667 aa33.9■■■■□ 3.02
SSSCA1-205ENST00000527920 GPD1P21695 349 aa33.9■■■■□ 3.02
SSSCA1-205ENST00000527920 C5AR1P21730 350 aa33.9■■■■□ 3.02
SSSCA1-205ENST00000527920 OR1E1P30953 314 aa33.9■■■■□ 3.02
SSSCA1-205ENST00000527920 MAPK8P45983 427 aa33.9■■■■□ 3.02
SSSCA1-205ENST00000527920 HDAC4P56524 1084 aa33.9■■■■□ 3.02
SSSCA1-205ENST00000527920 SH3PXD2AQ5TCZ1 1133 aa33.9■■■■□ 3.02
SSSCA1-205ENST00000527920 MANEALQ5VSG8 457 aa33.9■■■■□ 3.02
SSSCA1-205ENST00000527920 TFAP2DQ7Z6R9 452 aa33.9■■■■□ 3.02
SSSCA1-205ENST00000527920 DSG4Q86SJ6 1040 aa33.9■■■■□ 3.02
SSSCA1-205ENST00000527920 MCOLN2Q8IZK6 566 aa33.9■■■■□ 3.02
SSSCA1-205ENST00000527920 SH2D3CQ8N5H7 860 aa33.9■■■■□ 3.02
SSSCA1-205ENST00000527920 C1orf216Q8TAB5 229 aa33.9■■■■□ 3.02
SSSCA1-205ENST00000527920 FAM172AQ8WUF8 416 aa33.9■■■■□ 3.02
SSSCA1-205ENST00000527920 PSMB7Q99436 277 aa33.9■■■■□ 3.02
SSSCA1-205ENST00000527920 ANKRD62A6NC57 917 aa33.89■■■■□ 3.02
SSSCA1-205ENST00000527920 ALOX15BO15296 676 aa33.89■■■■□ 3.02
SSSCA1-205ENST00000527920 SRGAP2O75044 1071 aa33.89■■■■□ 3.02
SSSCA1-205ENST00000527920 ADRB1P08588 477 aa33.89■■■■□ 3.02
SSSCA1-205ENST00000527920 CSRP1P21291 193 aaKnown RBP33.89■■■■□ 3.02
SSSCA1-205ENST00000527920 SLC8A1P32418 973 aa33.89■■■■□ 3.02
SSSCA1-205ENST00000527920 PRKCIP41743 596 aa33.89■■■■□ 3.02
SSSCA1-205ENST00000527920 RAB6CQ53S08 254 aa33.89■■■■□ 3.02
SSSCA1-205ENST00000527920 PPP1R15BQ5SWA1 713 aa33.89■■■■□ 3.02
SSSCA1-205ENST00000527920 RAB6CQ9H0N0 254 aa33.89■■■■□ 3.02
SSSCA1-205ENST00000527920 OSGEPQ9NPF4 335 aa33.89■■■■□ 3.02
SSSCA1-205ENST00000527920 OR12D3Q9UGF7 316 aa33.89■■■■□ 3.02
SSSCA1-205ENST00000527920 VPS51Q9UID3 782 aa33.89■■■■□ 3.02
SSSCA1-205ENST00000527920 NUMA1Q14980 2115 aa33.89■■■■□ 3.02
SSSCA1-205ENST00000527920 UPK3BL1B0FP48 263 aa33.88■■■■□ 3.01
SSSCA1-205ENST00000527920 UPK3BL2E5RIL1 263 aa33.88■■■■□ 3.01
SSSCA1-205ENST00000527920 BCAT2O15382 392 aaPredicted RBP33.88■■■■□ 3.01
SSSCA1-205ENST00000527920 TNFAIP3P21580 790 aa33.88■■■■□ 3.01
SSSCA1-205ENST00000527920 ZNF143P52747 638 aaPredicted RBP33.88■■■■□ 3.01
SSSCA1-205ENST00000527920 SCAPQ12770 1279 aa33.88■■■■□ 3.01
SSSCA1-205ENST00000527920 DLG2Q15700 870 aa33.88■■■■□ 3.01
SSSCA1-205ENST00000527920 ASIC2Q16515 512 aa33.88■■■■□ 3.01
SSSCA1-205ENST00000527920 LUZP1Q86V48 1076 aa33.88■■■■□ 3.01
SSSCA1-205ENST00000527920 ZCCHC9Q8N567 271 aaKnown RBP33.88■■■■□ 3.01
SSSCA1-205ENST00000527920 GANCQ8TET4 914 aa33.88■■■■□ 3.01
SSSCA1-205ENST00000527920 SERGEFQ9UGK8 458 aa33.88■■■■□ 3.01
SSSCA1-205ENST00000527920 EIF2B4Q9UI10 523 aaKnown RBP33.88■■■■□ 3.01
SSSCA1-205ENST00000527920 KCNK5O95279 499 aa33.87■■■■□ 3.01
SSSCA1-205ENST00000527920 VAV1P15498 845 aa33.87■■■■□ 3.01
SSSCA1-205ENST00000527920 NUMBP49757 651 aa33.87■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms