RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 ARCQ7LC44 396 aa15.96■□□□□ 0.15
CAPN1-213ENST00000527897 LUZP1Q86V48 1076 aa15.96■□□□□ 0.15
CAPN1-213ENST00000527897 FAM172AQ8WUF8 416 aa15.96■□□□□ 0.15
CAPN1-213ENST00000527897 HAPLN3Q96S86 360 aa15.96■□□□□ 0.15
CAPN1-213ENST00000527897 PABPC3Q9H361 631 aaKnown RBP15.96■□□□□ 0.15
CAPN1-213ENST00000527897 CBX8Q9HC52 389 aa15.96■□□□□ 0.15
CAPN1-213ENST00000527897 CAPN10Q9HC96 672 aa15.96■□□□□ 0.15
CAPN1-213ENST00000527897 ITIH6Q6UXX5 1313 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 A0A1B0GTW7 788 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 ANKRD62A6NC57 917 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 C2CD4BA6NLJ0 364 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 TM4SF5O14894 197 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 SNAP91O60641 907 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 SYPP08247 313 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 GPD1P21695 349 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 OR1E1P30953 314 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 SLC8A1P32418 973 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 RFC1P35251 1148 aaPredicted RBP15.95■□□□□ 0.14
CAPN1-213ENST00000527897 KRT83P78385 493 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 ARL13BQ3SXY8 428 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 C5orf22Q49AR2 442 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 RWDD4Q6NW29 188 aaKnown RBP15.95■□□□□ 0.14
CAPN1-213ENST00000527897 MON1BQ7L1V2 547 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 PHF13Q86YI8 300 aaPredicted RBP15.95■□□□□ 0.14
CAPN1-213ENST00000527897 DRC7Q8IY82 874 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 ZNF683Q8IZ20 524 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 MINDY1Q8N5J2 469 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 BAP1Q92560 729 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 PTPRN2Q92932 1015 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 ALG14Q96F25 216 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 C1orf74Q96LT6 269 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 SPON2Q9BUD6 331 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 TMEM51Q9NW97 253 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 SERGEFQ9UGK8 458 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 TBC1D30Q9Y2I9 924 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 DOCK4Q8N1I0 1966 aa15.95■□□□□ 0.14
CAPN1-213ENST00000527897 NCOR2Q9Y618 2525 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 A0A0D9SEW6 157 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 A0A1B0GTH6 734 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 DRGXA6NNA5 263 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 GOLGA6L19H0YKK7 550 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 ARHGAP33O14559 1287 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 NOVA1P51513 510 aaKnown RBP15.94■□□□□ 0.14
CAPN1-213ENST00000527897 C1QBPQ07021 282 aaKnown RBP15.94■□□□□ 0.14
CAPN1-213ENST00000527897 SFSWAPQ12872 951 aaKnown RBP15.94■□□□□ 0.14
CAPN1-213ENST00000527897 ARID5BQ14865 1188 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 DLG2Q15700 870 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 POM121L1PQ3SYA9 428 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 C6orf118Q5T5N4 469 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 ACAD10Q6JQN1 1059 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 SCYL2Q6P3W7 929 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 WDR59Q6PJI9 974 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 LINGO4Q6UY18 593 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 Q6ZVU0 165 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 BNIPLQ7Z465 357 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 IRF2BP2Q7Z5L9 587 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 SETD3Q86TU7 594 aaPredicted RBP15.94■□□□□ 0.14
CAPN1-213ENST00000527897 HDDC3Q8N4P3 179 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 ATP11CQ8NB49 1132 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 C3orf20Q8ND61 904 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 OR7D4Q8NG98 312 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 DNASE2BQ8WZ79 361 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 OR8D1Q8WZ84 308 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 MCEEQ96PE7 176 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 FAM129BQ96TA1 746 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 C2orf49Q9BVC5 232 aaPredicted RBP15.94■□□□□ 0.14
CAPN1-213ENST00000527897 ZYG11BQ9C0D3 744 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 NEUROG2Q9H2A3 272 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 SGK2Q9HBY8 427 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 TAS2R14Q9NYV8 317 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 OR12D3Q9UGF7 316 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 SCML1Q9UN30 329 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 OR51B4Q9Y5P0 310 aa15.94■□□□□ 0.14
CAPN1-213ENST00000527897 ASCC3Q8N3C0 2202 aaKnown RBP15.94■□□□□ 0.14
CAPN1-213ENST00000527897 CBX4O00257 560 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 GIPC1O14908 333 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 BCAT2O15382 392 aaPredicted RBP15.93■□□□□ 0.14
CAPN1-213ENST00000527897 OPHN1O60890 802 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 ENDOD1O94919 500 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 KCNK5O95279 499 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 ADH1BP00325 375 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 PTMSP20962 102 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 RRM1P23921 792 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 ADRA1BP35368 520 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 PTPN9P43378 593 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 HDAC4P56524 1084 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 ELAVL3Q14576 367 aaKnown RBP15.93■□□□□ 0.14
CAPN1-213ENST00000527897 ACBD5Q5T8D3 534 aaPredicted RBP15.93■□□□□ 0.14
CAPN1-213ENST00000527897 SFMBT2Q5VUG0 894 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 DCUN1D2Q6PH85 259 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 USP30Q70CQ3 517 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 STRADAQ7RTN6 431 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 DNAAF5Q86Y56 855 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 SH2D3CQ8N5H7 860 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 CCDC185Q8N715 623 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 DEFB124Q8NES8 71 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 FRS2Q8WU20 508 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 BIRC7Q96CA5 298 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 PSMB7Q99436 277 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 MAGEB5Q9BZ81 275 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms