RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 GTF2A1P52655 376 aaPredicted RBP17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 COG7P83436 770 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 TLE2Q04725 743 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 ELAVL2Q12926 359 aaKnown RBP17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 PSMD5Q16401 504 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 MROH9Q5TGP6 573 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 RASIP1Q5U651 963 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 ITPRIPL1Q6GPH6 555 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 SH2D5Q6ZV89 423 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 CNTD1Q8N815 330 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 DNAAF3Q8N9W5 541 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 ALKBH8Q96BT7 664 aaKnown RBP17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 SLC39A13Q96H72 371 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 ZNF419Q96HQ0 510 aaPredicted RBP17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 ALG13Q9NP73 1137 aaKnown RBP17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 SLCO1B3Q9NPD5 702 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 IL37Q9NZH6 218 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 MKI67P46013 3256 aaKnown RBP17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 ADAM12O43184 909 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 TBC1D4O60343 1298 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 CXCL10P02778 98 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 MLLT6P55198 1093 aaPredicted RBP17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 C10orf120Q5SQS8 335 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 KCTD11Q693B1 232 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 SLC39A5Q6ZMH5 540 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 ANKS3Q6ZW76 656 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 TFAP2DQ7Z6R9 452 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 SPPL2BQ8TCT7 592 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 APOPT1Q96IL0 206 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 VAT1Q99536 393 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 TMEM175Q9BSA9 504 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 SHROOM3Q8TF72 1996 aa17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 CCNB1P14635 433 aa17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 CCDC15Q0P6D6 951 aa17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 ANKRD33Q7Z3H0 272 aa17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 MAGEC3Q8TD91 643 aa17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 LRRC8CQ8TDW0 803 aa17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 RPS6KL1Q9Y6S9 549 aa17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 FAM92AA1XBS5 289 aa17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 HMX2A2RU54 273 aa17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 H7C4K7 107 aa17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 TM9SF1O15321 606 aa17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 MAFKO60675 156 aa17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 EDF1O60869 148 aaKnown RBP17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 ALDH1A2O94788 518 aa17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 RTN3O95197 1032 aaPredicted RBP17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 HAPLN1P10915 354 aaPredicted RBP17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 NQO1P15559 274 aaKnown RBP17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 ALDH7A1P49419 539 aaKnown RBP17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 SLC18A2Q05940 514 aa17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 LGSNQ5TDP6 509 aa17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 RTL3Q8N8U3 475 aaKnown RBP17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 ANKLE1Q8NAG6 615 aa17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 SPATA22Q8NHS9 363 aa17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 THOC1Q96FV9 657 aaKnown RBP17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 FAM111AQ96PZ2 611 aa17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 MARCH2Q9P0N8 246 aa17.66■□□□□ 0.42
PCDHA6-202ENST00000527624 C2CD2LO14523 706 aa17.65■□□□□ 0.42
PCDHA6-202ENST00000527624 KRT38O76015 456 aa17.65■□□□□ 0.42
PCDHA6-202ENST00000527624 SLC2A3P11169 496 aa17.65■□□□□ 0.42
PCDHA6-202ENST00000527624 TPH1P17752 444 aa17.65■□□□□ 0.42
PCDHA6-202ENST00000527624 CCNCP24863 283 aa17.65■□□□□ 0.42
PCDHA6-202ENST00000527624 HTR7P34969 479 aa17.65■□□□□ 0.42
PCDHA6-202ENST00000527624 NEK3P51956 506 aa17.65■□□□□ 0.42
PCDHA6-202ENST00000527624 KCNJ2P63252 427 aa17.65■□□□□ 0.42
PCDHA6-202ENST00000527624 MS4A13Q5J8X5 152 aa17.65■□□□□ 0.42
PCDHA6-202ENST00000527624 CERCAMQ5T4B2 595 aa17.65■□□□□ 0.42
PCDHA6-202ENST00000527624 CDHR3Q6ZTQ4 885 aa17.65■□□□□ 0.42
PCDHA6-202ENST00000527624 TSGA13Q96PP4 275 aa17.65■□□□□ 0.42
PCDHA6-202ENST00000527624 CASS4Q9NQ75 786 aa17.65■□□□□ 0.42
PCDHA6-202ENST00000527624 TLR8Q9NR97 1041 aaKnown RBP17.65■□□□□ 0.42
PCDHA6-202ENST00000527624 ATP9BO43861 1147 aa17.64■□□□□ 0.42
PCDHA6-202ENST00000527624 RFPL1O75677 317 aa17.64■□□□□ 0.42
PCDHA6-202ENST00000527624 ATP6V1G2O95670 118 aa17.64■□□□□ 0.42
PCDHA6-202ENST00000527624 POLBP06746 335 aa17.64■□□□□ 0.42
PCDHA6-202ENST00000527624 ERVK-10P10266 1014 aa17.64■□□□□ 0.42
PCDHA6-202ENST00000527624 ATF6P18850 670 aa17.64■□□□□ 0.42
PCDHA6-202ENST00000527624 MNX1P50219 401 aaPredicted RBP17.64■□□□□ 0.42
PCDHA6-202ENST00000527624 CCNJLQ8IV13 435 aa17.64■□□□□ 0.42
PCDHA6-202ENST00000527624 LZTR1Q8N653 840 aa17.64■□□□□ 0.42
PCDHA6-202ENST00000527624 FBXO22Q8NEZ5 403 aa17.64■□□□□ 0.42
PCDHA6-202ENST00000527624 TTC17Q96AE7 1141 aa17.64■□□□□ 0.42
PCDHA6-202ENST00000527624 KLHL29Q96CT2 875 aa17.64■□□□□ 0.42
PCDHA6-202ENST00000527624 C1orf74Q96LT6 269 aa17.64■□□□□ 0.42
PCDHA6-202ENST00000527624 FCRL3Q96P31 734 aaPredicted RBP17.64■□□□□ 0.42
PCDHA6-202ENST00000527624 SRPK1Q96SB4 655 aaKnown RBP17.64■□□□□ 0.42
PCDHA6-202ENST00000527624 NAT9Q9BTE0 207 aa17.64■□□□□ 0.42
PCDHA6-202ENST00000527624 CCSER2Q9H7U1 834 aa17.64■□□□□ 0.42
PCDHA6-202ENST00000527624 CLIC5Q9NZA1 410 aa17.64■□□□□ 0.42
PCDHA6-202ENST00000527624 BFARQ9NZS9 450 aa17.64■□□□□ 0.42
PCDHA6-202ENST00000527624 PCDH10Q9P2E7 1040 aa17.64■□□□□ 0.42
PCDHA6-202ENST00000527624 PSAT1Q9Y617 370 aa17.64■□□□□ 0.42
PCDHA6-202ENST00000527624 PLXNA3P51805 1871 aa17.64■□□□□ 0.41
PCDHA6-202ENST00000527624 SLC12A8A0AV02 714 aa17.64■□□□□ 0.41
PCDHA6-202ENST00000527624 ERI2A8K979 691 aaKnown RBP17.64■□□□□ 0.41
PCDHA6-202ENST00000527624 COPEO14579 308 aa17.64■□□□□ 0.41
PCDHA6-202ENST00000527624 PAPOLAP51003 745 aaKnown RBP17.64■□□□□ 0.41
PCDHA6-202ENST00000527624 NIPAL4Q0D2K0 466 aa17.64■□□□□ 0.41
PCDHA6-202ENST00000527624 RIPK1Q13546 671 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms