RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 YWHAZP63104 245 aaKnown RBP16.6■□□□□ 0.25
PTPRU-210ENST00000527027 STAT4Q14765 748 aa16.6■□□□□ 0.25
PTPRU-210ENST00000527027 FAM46CQ5VWP2 391 aa16.6■□□□□ 0.25
PTPRU-210ENST00000527027 DSG4Q86SJ6 1040 aa16.6■□□□□ 0.25
PTPRU-210ENST00000527027 FMR1NBQ8N0W7 255 aaPredicted RBP16.6■□□□□ 0.25
PTPRU-210ENST00000527027 CCAR2Q8N163 923 aaKnown RBP16.6■□□□□ 0.25
PTPRU-210ENST00000527027 ATP6V0D2Q8N8Y2 350 aa16.6■□□□□ 0.25
PTPRU-210ENST00000527027 LSM14AQ8ND56 463 aaKnown RBP16.6■□□□□ 0.25
PTPRU-210ENST00000527027 SPATA20Q8TB22 786 aa16.6■□□□□ 0.25
PTPRU-210ENST00000527027 RFFLQ8WZ73 363 aa16.6■□□□□ 0.25
PTPRU-210ENST00000527027 OR8D1Q8WZ84 308 aa16.6■□□□□ 0.25
PTPRU-210ENST00000527027 CEP63Q96MT8 703 aa16.6■□□□□ 0.25
PTPRU-210ENST00000527027 SLC4A5Q9BY07 1137 aa16.6■□□□□ 0.25
PTPRU-210ENST00000527027 POPDC2Q9HBU9 364 aa16.6■□□□□ 0.25
PTPRU-210ENST00000527027 GDPD2Q9HCC8 539 aa16.6■□□□□ 0.25
PTPRU-210ENST00000527027 SLC12A6Q9UHW9 1150 aa16.6■□□□□ 0.25
PTPRU-210ENST00000527027 ASH1LQ9NR48 2969 aaKnown RBP16.6■□□□□ 0.25
PTPRU-210ENST00000527027 PTPRQQ9UMZ3 2332 aa16.59■□□□□ 0.25
PTPRU-210ENST00000527027 PLRG1O43660 514 aaKnown RBP16.59■□□□□ 0.25
PTPRU-210ENST00000527027 IGLV3-25P01717 112 aa16.59■□□□□ 0.25
PTPRU-210ENST00000527027 GLDCP23378 1020 aa16.59■□□□□ 0.25
PTPRU-210ENST00000527027 ACP1P24666 158 aa16.59■□□□□ 0.25
PTPRU-210ENST00000527027 NUMBP49757 651 aa16.59■□□□□ 0.25
PTPRU-210ENST00000527027 E2F1Q01094 437 aa16.59■□□□□ 0.25
PTPRU-210ENST00000527027 EIF4EBP2Q13542 120 aaPredicted RBP16.59■□□□□ 0.25
PTPRU-210ENST00000527027 PROX2Q3B8N5 592 aa16.59■□□□□ 0.25
PTPRU-210ENST00000527027 CCDC40Q4G0X9 1142 aa16.59■□□□□ 0.25
PTPRU-210ENST00000527027 DENND1BQ6P3S1 775 aa16.59■□□□□ 0.25
PTPRU-210ENST00000527027 TMEM110Q86TL2 294 aa16.59■□□□□ 0.25
PTPRU-210ENST00000527027 TRIM69Q86WT6 500 aa16.59■□□□□ 0.25
PTPRU-210ENST00000527027 ARHGEF19Q8IW93 802 aa16.59■□□□□ 0.25
PTPRU-210ENST00000527027 EHBP1Q8NDI1 1231 aa16.59■□□□□ 0.25
PTPRU-210ENST00000527027 SMARCE1Q969G3 411 aa16.59■□□□□ 0.25
PTPRU-210ENST00000527027 DHTKD1Q96HY7 919 aaPredicted RBP16.59■□□□□ 0.25
PTPRU-210ENST00000527027 FCRL3Q96P31 734 aaPredicted RBP16.59■□□□□ 0.25
PTPRU-210ENST00000527027 MED15Q96RN5 788 aa16.59■□□□□ 0.25
PTPRU-210ENST00000527027 PPP1R9BQ96SB3 815 aa16.59■□□□□ 0.25
PTPRU-210ENST00000527027 PRMT1Q99873 361 aaKnown RBP16.59■□□□□ 0.25
PTPRU-210ENST00000527027 THAP9Q9H5L6 903 aa16.59■□□□□ 0.25
PTPRU-210ENST00000527027 SARDHQ9UL12 918 aa16.59■□□□□ 0.25
PTPRU-210ENST00000527027 PPM1HQ9ULR3 514 aa16.59■□□□□ 0.25
PTPRU-210ENST00000527027 CNTN6Q9UQ52 1028 aa16.59■□□□□ 0.25
PTPRU-210ENST00000527027 CLCA2Q9UQC9 943 aa16.59■□□□□ 0.25
PTPRU-210ENST00000527027 MGAQ8IWI9 3026 aa16.59■□□□□ 0.25
PTPRU-210ENST00000527027 ARID1BQ8NFD5 2236 aaPredicted RBP16.58■□□□□ 0.25
PTPRU-210ENST00000527027 A0A1B0GVM2 712 aa16.58■□□□□ 0.24
PTPRU-210ENST00000527027 TCAF2A6NFQ2 919 aa16.58■□□□□ 0.24
PTPRU-210ENST00000527027 PRAMEF26H0Y7S4 382 aa16.58■□□□□ 0.24
PTPRU-210ENST00000527027 PSMA7O14818 248 aa16.58■□□□□ 0.24
PTPRU-210ENST00000527027 ATP9BO43861 1147 aa16.58■□□□□ 0.24
PTPRU-210ENST00000527027 BRINP1O60477 761 aa16.58■□□□□ 0.24
PTPRU-210ENST00000527027 ZIC2O95409 532 aaPredicted RBP16.58■□□□□ 0.24
PTPRU-210ENST00000527027 ACTN2P35609 894 aa16.58■□□□□ 0.24
PTPRU-210ENST00000527027 INSM1Q01101 510 aaPredicted RBP16.58■□□□□ 0.24
PTPRU-210ENST00000527027 CNTN1Q12860 1018 aa16.58■□□□□ 0.24
PTPRU-210ENST00000527027 ZNF211Q13398 564 aaPredicted RBP16.58■□□□□ 0.24
PTPRU-210ENST00000527027 STIM1Q13586 685 aa16.58■□□□□ 0.24
PTPRU-210ENST00000527027 MEA1Q16626 185 aa16.58■□□□□ 0.24
PTPRU-210ENST00000527027 ACCSLQ4AC99 568 aa16.58■□□□□ 0.24
PTPRU-210ENST00000527027 RABGAP1LQ5R372 815 aa16.58■□□□□ 0.24
PTPRU-210ENST00000527027 TTC39BQ5VTQ0 682 aaPredicted RBP16.58■□□□□ 0.24
PTPRU-210ENST00000527027 CIR1Q86X95 450 aaPredicted RBP16.58■□□□□ 0.24
PTPRU-210ENST00000527027 SLC25A45Q8N413 288 aa16.58■□□□□ 0.24
PTPRU-210ENST00000527027 DCBLD1Q8N8Z6 715 aa16.58■□□□□ 0.24
PTPRU-210ENST00000527027 ERCC4Q92889 916 aaPredicted RBP16.58■□□□□ 0.24
PTPRU-210ENST00000527027 KREMEN1Q96MU8 473 aa16.58■□□□□ 0.24
PTPRU-210ENST00000527027 E5RJQ4 531 aa16.57■□□□□ 0.24
PTPRU-210ENST00000527027 TRIM38O00635 465 aa16.57■□□□□ 0.24
PTPRU-210ENST00000527027 MCF2LO15068 1137 aa16.57■□□□□ 0.24
PTPRU-210ENST00000527027 ALOX15BO15296 676 aa16.57■□□□□ 0.24
PTPRU-210ENST00000527027 SIGLEC6O43699 453 aa16.57■□□□□ 0.24
PTPRU-210ENST00000527027 SDC3O75056 442 aa16.57■□□□□ 0.24
PTPRU-210ENST00000527027 C1QL1O75973 258 aa16.57■□□□□ 0.24
PTPRU-210ENST00000527027 SLC2A3P11169 496 aa16.57■□□□□ 0.24
PTPRU-210ENST00000527027 PITX1P78337 314 aaPredicted RBP16.57■□□□□ 0.24
PTPRU-210ENST00000527027 DLG2Q15700 870 aa16.57■□□□□ 0.24
PTPRU-210ENST00000527027 SETMARQ53H47 684 aaPredicted RBP16.57■□□□□ 0.24
PTPRU-210ENST00000527027 AGBL4Q5VU57 503 aa16.57■□□□□ 0.24
PTPRU-210ENST00000527027 CXorf57Q6NSI4 855 aaKnown RBP16.57■□□□□ 0.24
PTPRU-210ENST00000527027 GPR155Q7Z3F1 870 aa16.57■□□□□ 0.24
PTPRU-210ENST00000527027 ALG14Q96F25 216 aa16.57■□□□□ 0.24
PTPRU-210ENST00000527027 KLHDC7BQ96G42 594 aa16.57■□□□□ 0.24
PTPRU-210ENST00000527027 FEM1AQ9BSK4 669 aa16.57■□□□□ 0.24
PTPRU-210ENST00000527027 PREBQ9HCU5 417 aa16.57■□□□□ 0.24
PTPRU-210ENST00000527027 SLC25A13Q9UJS0 675 aa16.57■□□□□ 0.24
PTPRU-210ENST00000527027 TEX51A0A1B0GUA7 166 aa16.56■□□□□ 0.24
PTPRU-210ENST00000527027 C1QTNF3-AMACRE9PGA6 284 aa16.56■□□□□ 0.24
PTPRU-210ENST00000527027 MED7O43513 233 aa16.56■□□□□ 0.24
PTPRU-210ENST00000527027 RNGTTO60942 597 aaKnown RBP16.56■□□□□ 0.24
PTPRU-210ENST00000527027 LETM1O95202 739 aaPredicted RBP16.56■□□□□ 0.24
PTPRU-210ENST00000527027 KRT5P13647 590 aa16.56■□□□□ 0.24
PTPRU-210ENST00000527027 ZNF18P17022 549 aa16.56■□□□□ 0.24
PTPRU-210ENST00000527027 CCR1P32246 355 aa16.56■□□□□ 0.24
PTPRU-210ENST00000527027 CDK17Q00537 523 aa16.56■□□□□ 0.24
PTPRU-210ENST00000527027 TAF5Q15542 800 aa16.56■□□□□ 0.24
PTPRU-210ENST00000527027 TBC1D25Q3MII6 688 aa16.56■□□□□ 0.24
PTPRU-210ENST00000527027 POM121L1PQ3SYA9 428 aa16.56■□□□□ 0.24
PTPRU-210ENST00000527027 FBXL22Q6P050 247 aa16.56■□□□□ 0.24
PTPRU-210ENST00000527027 ZNF606Q8WXB4 792 aa16.56■□□□□ 0.24
PTPRU-210ENST00000527027 CA5BQ9Y2D0 317 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms