RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 PID1Q7Z2X4 250 aa20.98■□□□□ 0.95
SMCO4-203ENST00000526869 KLHDC8BQ8IXV7 354 aa20.98■□□□□ 0.95
SMCO4-203ENST00000526869 DEPDC1BQ8WUY9 529 aa20.98■□□□□ 0.95
SMCO4-203ENST00000526869 LRRC39Q96DD0 335 aa20.98■□□□□ 0.95
SMCO4-203ENST00000526869 MYEOVQ96EZ4 313 aa20.98■□□□□ 0.95
SMCO4-203ENST00000526869 PRICKLE1Q96MT3 831 aaPredicted RBP20.98■□□□□ 0.95
SMCO4-203ENST00000526869 DNAJC17Q9NVM6 304 aaKnown RBP20.98■□□□□ 0.95
SMCO4-203ENST00000526869 SMPD4Q9NXE4 827 aa20.98■□□□□ 0.95
SMCO4-203ENST00000526869 IPO11Q9UI26 975 aaKnown RBP20.98■□□□□ 0.95
SMCO4-203ENST00000526869 ARHGAP26Q9UNA1 814 aa20.98■□□□□ 0.95
SMCO4-203ENST00000526869 NYNRINQ9P2P1 1898 aaKnown RBP20.97■□□□□ 0.95
SMCO4-203ENST00000526869 A0A1B0GVM2 712 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 TCAF2A6NFQ2 919 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 GOLGA8MH3BSY2 632 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 GFRA2O00451 464 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 CACNG3O60359 315 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 RFPL2O75678 378 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 CCNB1P14635 433 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 PBX2P40425 430 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 MAGEA3P43357 314 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 IFNAR2P48551 515 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 TNK2Q07912 1038 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 IFFO1Q0D2I5 559 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 ZBTB17Q13105 803 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 KYNUQ16719 465 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 DNAJC21Q5F1R6 531 aaKnown RBP20.97■□□□□ 0.95
SMCO4-203ENST00000526869 FNBP1LQ5T0N5 605 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 COL13A1Q5TAT6 717 aaPredicted RBP20.97■□□□□ 0.95
SMCO4-203ENST00000526869 PPP2R2DQ66LE6 453 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 RFWD3Q6PCD5 774 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 HTR3DQ70Z44 454 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 MAB21L3Q8N8X9 362 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 SHKBP1Q8TBC3 707 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 WBP2Q969T9 261 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 HMCESQ96FZ2 354 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 SERPINB12Q96P63 405 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 CYP2S1Q96SQ9 504 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 PRKD2Q9BZL6 878 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 MAGEH1Q9H213 219 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 NKX2-4Q9H2Z4 354 aa20.97■□□□□ 0.95
SMCO4-203ENST00000526869 ZFP37Q9Y6Q3 630 aaPredicted RBP20.97■□□□□ 0.95
SMCO4-203ENST00000526869 HELZP42694 1942 aaKnown RBP20.96■□□□□ 0.95
SMCO4-203ENST00000526869 NUP205Q92621 2012 aa20.96■□□□□ 0.95
SMCO4-203ENST00000526869 GOLGA6L10A6NI86 522 aa20.96■□□□□ 0.95
SMCO4-203ENST00000526869 PSMD3O43242 534 aa20.96■□□□□ 0.95
SMCO4-203ENST00000526869 JCHAINP01591 159 aa20.96■□□□□ 0.95
SMCO4-203ENST00000526869 PSMB4P28070 264 aa20.96■□□□□ 0.95
SMCO4-203ENST00000526869 OR1E1P30953 314 aa20.96■□□□□ 0.95
SMCO4-203ENST00000526869 GAD2Q05329 585 aa20.96■□□□□ 0.95
SMCO4-203ENST00000526869 SERINC3Q13530 473 aa20.96■□□□□ 0.95
SMCO4-203ENST00000526869 HNRNPDQ14103 355 aaKnown RBP20.96■□□□□ 0.95
SMCO4-203ENST00000526869 POLD3Q15054 466 aaPredicted RBP20.96■□□□□ 0.95
SMCO4-203ENST00000526869 DUSP6Q16828 381 aa20.96■□□□□ 0.95
SMCO4-203ENST00000526869 CEP85LQ5SZL2 805 aa20.96■□□□□ 0.95
SMCO4-203ENST00000526869 C6orf118Q5T5N4 469 aa20.96■□□□□ 0.95
SMCO4-203ENST00000526869 ARHGAP36Q6ZRI8 547 aa20.96■□□□□ 0.95
SMCO4-203ENST00000526869 SETD3Q86TU7 594 aaPredicted RBP20.96■□□□□ 0.95
SMCO4-203ENST00000526869 HJURPQ8NCD3 748 aaPredicted RBP20.96■□□□□ 0.95
SMCO4-203ENST00000526869 ROPN1BQ9BZX4 212 aaPredicted RBP20.96■□□□□ 0.95
SMCO4-203ENST00000526869 TASP1Q9H6P5 420 aa20.96■□□□□ 0.95
SMCO4-203ENST00000526869 ROPN1Q9HAT0 212 aaPredicted RBP20.96■□□□□ 0.95
SMCO4-203ENST00000526869 HCFC1R1Q9NWW0 138 aa20.96■□□□□ 0.95
SMCO4-203ENST00000526869 DNMT3BQ9UBC3 853 aaKnown RBP20.96■□□□□ 0.95
SMCO4-203ENST00000526869 RSPH14Q9UHP6 348 aa20.96■□□□□ 0.95
SMCO4-203ENST00000526869 HCFC2Q9Y5Z7 792 aa20.96■□□□□ 0.95
SMCO4-203ENST00000526869 GOLGA6CA6NDK9 693 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 ZNF197O14709 1029 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 ZBTB24O43167 697 aaPredicted RBP20.95■□□□□ 0.94
SMCO4-203ENST00000526869 MOSPD3O75425 235 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 TCEA3O75764 348 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 SUN1O94901 812 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 RHOP08100 348 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 MYZAPP0CAP1 466 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 GOLGA6DP0CG33 693 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 OAS2P29728 719 aaKnown RBP20.95■□□□□ 0.94
SMCO4-203ENST00000526869 CD68P34810 354 aaPredicted RBP20.95■□□□□ 0.94
SMCO4-203ENST00000526869 CCR2P41597 374 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 LMAN1P49257 510 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 IL10RBQ08334 325 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 PRPSAP1Q14558 356 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 MSS51Q4VC12 460 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 CCDC38Q502W7 563 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 ZNF783Q6ZMS7 281 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 CAND1Q86VP6 1230 aaKnown RBP20.95■□□□□ 0.94
SMCO4-203ENST00000526869 CIR1Q86X95 450 aaPredicted RBP20.95■□□□□ 0.94
SMCO4-203ENST00000526869 ZBED8Q8IZ13 594 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 CPXM2Q8N436 756 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 ATP11CQ8NB49 1132 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 ZNF707Q96C28 371 aaPredicted RBP20.95■□□□□ 0.94
SMCO4-203ENST00000526869 C9orf72Q96LT7 481 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 ZNF599Q96NL3 588 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 CDCA3Q99618 268 aaPredicted RBP20.95■□□□□ 0.94
SMCO4-203ENST00000526869 SLC46A2Q9BY10 475 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 CEP41Q9BYV8 373 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 TLE6Q9H808 572 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 GOLGA6AQ9NYA3 693 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 TBC1D30Q9Y2I9 924 aa20.95■□□□□ 0.94
SMCO4-203ENST00000526869 ATG2AQ2TAZ0 1938 aa20.94■□□□□ 0.94
SMCO4-203ENST00000526869 CHD5Q8TDI0 1954 aa20.94■□□□□ 0.94
SMCO4-203ENST00000526869 CEP290O15078 2479 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms