RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 LHX5Q9H2C1 402 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 EHD1Q9H4M9 534 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 PTPRHQ9HD43 1115 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 C12orf4Q9NQ89 552 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 ITGB1BP2Q9UKP3 347 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 SHOC2Q9UQ13 582 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 GPSM3Q9Y4H4 160 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 TBX10O75333 385 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 CYP3A5P20815 502 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 WEE1P30291 646 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 BRCC3P46736 316 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 ENPEPQ07075 957 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 ANKDD1AQ495B1 522 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 LRRC38Q5VT99 294 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 SDHAF4Q5VUM1 108 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 ALDH16A1Q8IZ83 802 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 CCDC185Q8N715 623 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 TCP10LQ8TDR4 215 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 SEC14L1Q92503 715 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 PMEPA1Q969W9 287 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 VPS50Q96JG6 964 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 GLT1D1Q96MS3 346 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 KCNK16Q96T55 309 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 UNKQ9C0B0 810 aaKnown RBP10.08□□□□□ -0.8
USP35-201ENST00000526425 ABI2Q9NYB9 513 aaPredicted RBP10.08□□□□□ -0.8
USP35-201ENST00000526425 PHTF1Q9UMS5 762 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 GABRQQ9UN88 632 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 ST3GAL5Q9UNP4 418 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 DNAH12Q6ZR08 3092 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 ATP8B3O60423 1300 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 XPO1O14980 1071 aaKnown RBP10.08□□□□□ -0.8
USP35-201ENST00000526425 UNC5CO95185 931 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 TPH1P17752 444 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 IVDP26440 423 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 CD52P31358 61 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 GRIK1P39086 918 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 CDK7P50613 346 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 PITX1P78337 314 aaPredicted RBP10.08□□□□□ -0.8
USP35-201ENST00000526425 MPP2Q14168 576 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 C6orf163Q5TEZ5 329 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 RAPH1Q70E73 1250 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 OSTM1Q86WC4 334 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 TTC39CQ8N584 583 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 ARFGAP1Q8N6T3 406 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 B3GALNT2Q8NCR0 500 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 TMEM174Q8WUU8 243 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 RSPH1Q8WYR4 309 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 VMP1Q96GC9 406 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 PPP1R10Q96QC0 940 aaKnown RBP10.08□□□□□ -0.8
USP35-201ENST00000526425 MRPL1Q9BYD6 325 aaKnown RBP10.08□□□□□ -0.8
USP35-201ENST00000526425 RXFP1Q9HBX9 757 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 CYLDQ9NQC7 956 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 SACM1LQ9NTJ5 587 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 FIS1Q9Y3D6 152 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 MYOCOSA0A1B0GUC4 107 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 ARHGAP42A6NI28 874 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 C2CD4BA6NLJ0 364 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 CLPTM1O96005 669 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 ITGAVP06756 1048 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 SLC25A11Q02978 314 aaKnown RBP10.08□□□□□ -0.8
USP35-201ENST00000526425 SLC34A1Q06495 639 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 CRY1Q16526 586 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 RNASEH2BQ5TBB1 312 aaKnown RBP10.08□□□□□ -0.8
USP35-201ENST00000526425 BPHLQ86WA6 291 aaPredicted RBP10.08□□□□□ -0.8
USP35-201ENST00000526425 ABI1Q8IZP0 508 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 NDUFAF2Q8N183 169 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 AGGF1Q8N302 714 aaeCLIP10.08□□□□□ -0.8
USP35-201ENST00000526425 PCSK9Q8NBP7 692 aaKnown RBP10.08□□□□□ -0.8
USP35-201ENST00000526425 HPS1Q92902 700 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 PPP2R3CQ969Q6 453 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 SCYL1Q96KG9 808 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 C2orf49Q9BVC5 232 aaPredicted RBP10.08□□□□□ -0.8
USP35-201ENST00000526425 NFKBIZQ9BYH8 718 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 KIAA1257Q9ULG3 409 aa10.08□□□□□ -0.8
USP35-201ENST00000526425 GNEQ9Y223 722 aaKnown RBP10.08□□□□□ -0.8
USP35-201ENST00000526425 FAM32AQ9Y421 112 aaKnown RBP10.08□□□□□ -0.8
USP35-201ENST00000526425 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.08□□□□□ -0.8
USP35-201ENST00000526425 H3BRJ5 948 aa10.07□□□□□ -0.8
USP35-201ENST00000526425 SEPT4O43236 478 aa10.07□□□□□ -0.8
USP35-201ENST00000526425 FGFR1P11362 822 aa10.07□□□□□ -0.8
USP35-201ENST00000526425 PTPN1P18031 435 aaKnown RBP10.07□□□□□ -0.8
USP35-201ENST00000526425 GRIA1P42261 906 aa10.07□□□□□ -0.8
USP35-201ENST00000526425 OR1G1P47890 313 aa10.07□□□□□ -0.8
USP35-201ENST00000526425 YWHAZP63104 245 aaKnown RBP10.07□□□□□ -0.8
USP35-201ENST00000526425 MSLNQ13421 630 aaPredicted RBP10.07□□□□□ -0.8
USP35-201ENST00000526425 FAM209AQ5JX71 171 aa10.07□□□□□ -0.8
USP35-201ENST00000526425 ITPRIPL1Q6GPH6 555 aa10.07□□□□□ -0.8
USP35-201ENST00000526425 FAM20CQ8IXL6 584 aa10.07□□□□□ -0.8
USP35-201ENST00000526425 PLD5Q8N7P1 536 aa10.07□□□□□ -0.8
USP35-201ENST00000526425 UTP4Q969X6 686 aaKnown RBP10.07□□□□□ -0.8
USP35-201ENST00000526425 TSNARE1Q96NA8 513 aa10.07□□□□□ -0.8
USP35-201ENST00000526425 PRPF18Q99633 342 aaKnown RBP10.07□□□□□ -0.8
USP35-201ENST00000526425 BCO2Q9BYV7 579 aa10.07□□□□□ -0.8
USP35-201ENST00000526425 KATNBL1Q9H079 304 aa10.07□□□□□ -0.8
USP35-201ENST00000526425 GIMAP4Q9NUV9 329 aa10.07□□□□□ -0.8
USP35-201ENST00000526425 PRKAG3Q9UGI9 489 aa10.07□□□□□ -0.8
USP35-201ENST00000526425 FAM189A1O60320 539 aa10.07□□□□□ -0.8
USP35-201ENST00000526425 KLRC2P26717 231 aa10.07□□□□□ -0.8
USP35-201ENST00000526425 AFF1P51825 1210 aaKnown RBP10.07□□□□□ -0.8
USP35-201ENST00000526425 SOX4Q06945 474 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms