RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 SULT2A1Q06520 285 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 DPYSQ14117 519 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 ZNF234Q14588 700 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 SDE2Q6IQ49 451 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 TSC1Q92574 1164 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 PSMB7Q99436 277 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 PRRX2Q99811 253 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 GABRG3Q99928 467 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 MUC3BQ9H195 1237 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 GOLPH3Q9H4A6 298 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 CACNA2D2Q9NY47 1150 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 DONSONQ9NYP3 566 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 RCOR3Q9P2K3 495 aaPredicted RBP13.26□□□□□ -0.29
SMPD1-202ENST00000526280 TRIM10Q9UDY6 481 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 VPS28Q9UK41 221 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 FBXO4Q9UKT5 387 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 ERVW-1Q9UQF0 538 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 HYOU1Q9Y4L1 999 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 STON1Q9Y6Q2 735 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 K7ESF4 209 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 DAPK3O43293 454 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 SPOPO43791 374 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 SRPRAP08240 638 aaKnown RBP13.25□□□□□ -0.29
SMPD1-202ENST00000526280 CD48P09326 243 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 CCDC175P0C221 793 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 ERCC2P18074 760 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 IL4RP24394 825 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 ETFBP38117 255 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 WASP42768 502 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 NUMBP49757 651 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 VASPP50552 380 aaPredicted RBP13.25□□□□□ -0.29
SMPD1-202ENST00000526280 KRT81Q14533 505 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 PDK2Q15119 407 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 ANGPT1Q15389 498 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 CRY1Q16526 586 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 IFI16Q16666 785 aaKnown RBP13.25□□□□□ -0.29
SMPD1-202ENST00000526280 TMEM92Q6UXU6 159 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 ZNF662Q6ZS27 426 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 WDFY4Q6ZS81 3184 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 DAAM2Q86T65 1068 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 RHOT1Q8IXI2 618 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 UMODL1-AS1Q8N2C9 162 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 LRRC57Q8N9N7 239 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 KDM1BQ8NB78 822 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 KCTD6Q8NC69 237 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 OR7D4Q8NG98 312 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 CHD5Q8TDI0 1954 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 ARHGEF2Q92974 986 aaKnown RBP13.25□□□□□ -0.29
SMPD1-202ENST00000526280 MYO19Q96H55 970 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 MRGPRX3Q96LB0 322 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 CSPG4P5Q96PW8 444 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 C2orf49Q9BVC5 232 aaPredicted RBP13.25□□□□□ -0.29
SMPD1-202ENST00000526280 ACE2Q9BYF1 805 aaPredicted RBP13.25□□□□□ -0.29
SMPD1-202ENST00000526280 TSGA10Q9BZW7 698 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 MAGEH1Q9H213 219 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 TMEM245Q9H330 911 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 KCNF1Q9H3M0 494 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 NOL6Q9H6R4 1146 aaKnown RBP13.25□□□□□ -0.29
SMPD1-202ENST00000526280 SLC8A2Q9UPR5 921 aa13.25□□□□□ -0.29
SMPD1-202ENST00000526280 ARIH1Q9Y4X5 557 aaPredicted RBP13.25□□□□□ -0.29
SMPD1-202ENST00000526280 NUP205Q92621 2012 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 A0A1W2PQF6 199 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 MACROD2A1Z1Q3 448 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 GRID2IPA4D2P6 1211 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 DCLK1O15075 740 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 SNAP91O60641 907 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 RAMP2O60895 175 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 ZMPSTE24O75844 475 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 TDGF1P13385 188 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 HOXB2P14652 356 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 AMPD1P23109 780 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 PRKCHP24723 683 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 HOXA6P31267 233 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 ACVRL1P37023 503 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 DGKEP52429 567 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 NDST2P52849 883 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 YBEYP58557 167 aaPredicted RBP13.24□□□□□ -0.29
SMPD1-202ENST00000526280 CSTF1Q05048 431 aaKnown RBP13.24□□□□□ -0.29
SMPD1-202ENST00000526280 MMRN1Q13201 1228 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 DPYSL3Q14195 570 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 POLD3Q15054 466 aaPredicted RBP13.24□□□□□ -0.29
SMPD1-202ENST00000526280 FNDC3BQ53EP0 1204 aaKnown RBP13.24□□□□□ -0.29
SMPD1-202ENST00000526280 SERPINA13PQ6UXR4 307 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 MAP7D3Q8IWC1 876 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 CAMKK1Q8N5S9 505 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 RNF10Q8N5U6 811 aaKnown RBP13.24□□□□□ -0.29
SMPD1-202ENST00000526280 DCAF4L2Q8NA75 395 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 KIAA1524Q8TCG1 905 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 RAPGEF5Q92565 580 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 RPL10LQ96L21 214 aaKnown RBP13.24□□□□□ -0.29
SMPD1-202ENST00000526280 SPON2Q9BUD6 331 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 KLC2Q9H0B6 622 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 KCNH6Q9H252 994 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 LRRC19Q9H756 370 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 CD248Q9HCU0 757 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 KLHL11Q9NVR0 708 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 VPS51Q9UID3 782 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 SLCO3A1Q9UIG8 710 aa13.24□□□□□ -0.29
SMPD1-202ENST00000526280 C3orf70A6NLC5 250 aaPredicted RBP13.23□□□□□ -0.29
SMPD1-202ENST00000526280 PSTPIP1O43586 416 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms