RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 CREB3L2Q70SY1 520 aa4.46□□□□□ -1.7
CSDE1-210ENST00000525878 C1QTNF4Q9BXJ3 329 aa4.46□□□□□ -1.7
CSDE1-210ENST00000525878 MAGED2Q9UNF1 606 aaPredicted RBP4.46□□□□□ -1.7
CSDE1-210ENST00000525878 SLC12A4Q9UP95 1085 aa4.46□□□□□ -1.7
CSDE1-210ENST00000525878 RPP40O75818 363 aaKnown RBP4.45□□□□□ -1.7
CSDE1-210ENST00000525878 SOX30O94993 753 aa4.45□□□□□ -1.7
CSDE1-210ENST00000525878 UMODP07911 640 aa4.45□□□□□ -1.7
CSDE1-210ENST00000525878 GRK5P34947 590 aa4.45□□□□□ -1.7
CSDE1-210ENST00000525878 CLCN5P51795 746 aa4.45□□□□□ -1.7
CSDE1-210ENST00000525878 DLX5P56178 289 aa4.45□□□□□ -1.7
CSDE1-210ENST00000525878 TRAF3Q13114 568 aa4.45□□□□□ -1.7
CSDE1-210ENST00000525878 ZNF718Q3SXZ3 478 aa4.45□□□□□ -1.7
CSDE1-210ENST00000525878 ZNF672Q499Z4 452 aaPredicted RBP4.45□□□□□ -1.7
CSDE1-210ENST00000525878 ARL13AQ5H913 290 aaPredicted RBP4.45□□□□□ -1.7
CSDE1-210ENST00000525878 TMEM71Q6P5X7 295 aa4.45□□□□□ -1.7
CSDE1-210ENST00000525878 IGFN1Q86VF2 1251 aa4.45□□□□□ -1.7
CSDE1-210ENST00000525878 RTP4Q96DX8 246 aa4.45□□□□□ -1.7
CSDE1-210ENST00000525878 TBCBQ99426 244 aa4.45□□□□□ -1.7
CSDE1-210ENST00000525878 EPS8L2Q9H6S3 715 aa4.45□□□□□ -1.7
CSDE1-210ENST00000525878 TM7SF3Q9NS93 570 aa4.45□□□□□ -1.7
CSDE1-210ENST00000525878 RAB21Q9UL25 225 aa4.45□□□□□ -1.7
CSDE1-210ENST00000525878 TRPC5Q9UL62 973 aaPredicted RBP4.45□□□□□ -1.7
CSDE1-210ENST00000525878 COPG1Q9Y678 874 aaKnown RBP4.45□□□□□ -1.7
CSDE1-210ENST00000525878 STMND1H3BQB6 276 aa4.44□□□□□ -1.7
CSDE1-210ENST00000525878 NCK2O43639 380 aa4.44□□□□□ -1.7
CSDE1-210ENST00000525878 LIASO43766 372 aa4.44□□□□□ -1.7
CSDE1-210ENST00000525878 EEF1GP26641 437 aaKnown RBP4.44□□□□□ -1.7
CSDE1-210ENST00000525878 RBM6P78332 1123 aaKnown RBP4.44□□□□□ -1.7
CSDE1-210ENST00000525878 POU3F1Q03052 451 aaPredicted RBP4.44□□□□□ -1.7
CSDE1-210ENST00000525878 IFIT5Q13325 482 aaKnown RBP4.44□□□□□ -1.7
CSDE1-210ENST00000525878 RAB30Q15771 203 aa4.44□□□□□ -1.7
CSDE1-210ENST00000525878 PLK5Q496M5 336 aa4.44□□□□□ -1.7
CSDE1-210ENST00000525878 WBP2NLQ6ICG8 309 aa4.44□□□□□ -1.7
CSDE1-210ENST00000525878 H1FNTQ75WM6 255 aaPredicted RBP4.44□□□□□ -1.7
CSDE1-210ENST00000525878 CCDC25Q86WR0 208 aa4.44□□□□□ -1.7
CSDE1-210ENST00000525878 TMEM217Q8N7C4 229 aa4.44□□□□□ -1.7
CSDE1-210ENST00000525878 CMASQ8NFW8 434 aaPredicted RBP4.44□□□□□ -1.7
CSDE1-210ENST00000525878 FAM110DQ8TAY7 271 aaPredicted RBP4.44□□□□□ -1.7
CSDE1-210ENST00000525878 FAM216AQ8WUB2 273 aa4.44□□□□□ -1.7
CSDE1-210ENST00000525878 HES6Q96HZ4 224 aa4.44□□□□□ -1.7
CSDE1-210ENST00000525878 REXO5Q96IC2 774 aaKnown RBP4.44□□□□□ -1.7
CSDE1-210ENST00000525878 APOLD1Q96LR9 279 aa4.44□□□□□ -1.7
CSDE1-210ENST00000525878 SORBS1Q9BX66 1292 aaKnown RBP4.44□□□□□ -1.7
CSDE1-210ENST00000525878 ZDHHC7Q9NXF8 308 aa4.44□□□□□ -1.7
CSDE1-210ENST00000525878 NFU1Q9UMS0 254 aa4.44□□□□□ -1.7
CSDE1-210ENST00000525878 PKP3Q9Y446 797 aa4.44□□□□□ -1.7
CSDE1-210ENST00000525878 DOCK7Q96N67 2140 aa4.43□□□□□ -1.7
CSDE1-210ENST00000525878 HNRNPDLO14979 420 aaKnown RBP4.43□□□□□ -1.7
CSDE1-210ENST00000525878 LDB2O43679 373 aa4.43□□□□□ -1.7
CSDE1-210ENST00000525878 KRT36O76013 467 aa4.43□□□□□ -1.7
CSDE1-210ENST00000525878 ITGB8P26012 769 aa4.43□□□□□ -1.7
CSDE1-210ENST00000525878 HILS1P60008 231 aa4.43□□□□□ -1.7
CSDE1-210ENST00000525878 ILF3Q12906 894 aaKnown RBP eCLIP4.43□□□□□ -1.7
CSDE1-210ENST00000525878 ZRSR1Q15695 479 aaKnown RBP4.43□□□□□ -1.7
CSDE1-210ENST00000525878 FAM209BQ5JX69 171 aa4.43□□□□□ -1.7
CSDE1-210ENST00000525878 KRTAP5-1Q6L8H4 278 aa4.43□□□□□ -1.7
CSDE1-210ENST00000525878 FBXO38Q6PIJ6 1188 aa4.43□□□□□ -1.7
CSDE1-210ENST00000525878 MUC20Q8N307 709 aaPredicted RBP4.43□□□□□ -1.7
CSDE1-210ENST00000525878 CLEC4CQ8WTT0 213 aa4.43□□□□□ -1.7
CSDE1-210ENST00000525878 WDR60Q8WVS4 1066 aa4.43□□□□□ -1.7
CSDE1-210ENST00000525878 WBP1Q96G27 269 aa4.43□□□□□ -1.7
CSDE1-210ENST00000525878 NPAS1Q99742 590 aa4.43□□□□□ -1.7
CSDE1-210ENST00000525878 IL25Q9H293 177 aa4.43□□□□□ -1.7
CSDE1-210ENST00000525878 ACTR5Q9H9F9 607 aaPredicted RBP4.43□□□□□ -1.7
CSDE1-210ENST00000525878 IL36RNQ9UBH0 155 aa4.43□□□□□ -1.7
CSDE1-210ENST00000525878 A0A0B4J293 547 aa4.42□□□□□ -1.7
CSDE1-210ENST00000525878 TCEA1P23193 301 aaKnown RBP4.42□□□□□ -1.7
CSDE1-210ENST00000525878 AMTP48728 403 aa4.42□□□□□ -1.7
CSDE1-210ENST00000525878 KIF19Q2TAC6 998 aa4.42□□□□□ -1.7
CSDE1-210ENST00000525878 ZNF284Q2VY69 593 aa4.42□□□□□ -1.7
CSDE1-210ENST00000525878 OTUD3Q5T2D3 398 aaPredicted RBP4.42□□□□□ -1.7
CSDE1-210ENST00000525878 FBXL22Q6P050 247 aa4.42□□□□□ -1.7
CSDE1-210ENST00000525878 DPP9Q86TI2 863 aa4.42□□□□□ -1.7
CSDE1-210ENST00000525878 DPP10Q8N608 796 aa4.42□□□□□ -1.7
CSDE1-210ENST00000525878 LRRC57Q8N9N7 239 aa4.42□□□□□ -1.7
CSDE1-210ENST00000525878 NEXN-AS1Q8NBZ9 246 aa4.42□□□□□ -1.7
CSDE1-210ENST00000525878 TMEM255BQ8WV15 326 aa4.42□□□□□ -1.7
CSDE1-210ENST00000525878 ZNF566Q969W8 418 aa4.42□□□□□ -1.7
CSDE1-210ENST00000525878 DUX5Q96PT3 197 aa4.42□□□□□ -1.7
CSDE1-210ENST00000525878 NAA15Q9BXJ9 866 aaKnown RBP4.42□□□□□ -1.7
CSDE1-210ENST00000525878 CCDC134Q9H6E4 229 aa4.42□□□□□ -1.7
CSDE1-210ENST00000525878 SAC3D1A6NKF1 404 aa4.41□□□□□ -1.7
CSDE1-210ENST00000525878 SNRNP70P08621 437 aaKnown RBP4.41□□□□□ -1.7
CSDE1-210ENST00000525878 MYZAPP0CAP1 466 aa4.41□□□□□ -1.7
CSDE1-210ENST00000525878 UNGP13051 313 aaPredicted RBP4.41□□□□□ -1.7
CSDE1-210ENST00000525878 NPPBP16860 134 aa4.41□□□□□ -1.7
CSDE1-210ENST00000525878 TNFSF4P23510 183 aa4.41□□□□□ -1.7
CSDE1-210ENST00000525878 KLRC2P26717 231 aa4.41□□□□□ -1.7
CSDE1-210ENST00000525878 KLRK1P26718 216 aa4.41□□□□□ -1.7
CSDE1-210ENST00000525878 AVPR1AP37288 418 aa4.41□□□□□ -1.7
CSDE1-210ENST00000525878 PPP3CCP48454 512 aa4.41□□□□□ -1.7
CSDE1-210ENST00000525878 GRSF1Q12849 480 aaKnown RBP eCLIP4.41□□□□□ -1.7
CSDE1-210ENST00000525878 PLCB4Q15147 1175 aa4.41□□□□□ -1.7
CSDE1-210ENST00000525878 TMEM200AQ86VY9 491 aa4.41□□□□□ -1.7
CSDE1-210ENST00000525878 RFLNBQ8N5W9 214 aa4.41□□□□□ -1.7
CSDE1-210ENST00000525878 TMEM163Q8TC26 289 aa4.41□□□□□ -1.7
CSDE1-210ENST00000525878 FIZ1Q96SL8 496 aa4.41□□□□□ -1.7
CSDE1-210ENST00000525878 PKP4Q99569 1192 aa4.41□□□□□ -1.7
CSDE1-210ENST00000525878 MECRQ9BV79 373 aa4.41□□□□□ -1.7
CSDE1-210ENST00000525878 SARGQ9BW04 601 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms