RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 RAPGEF5Q92565 580 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 DDX17Q92841 729 aaKnown RBP4.64□□□□□ -1.67
CD44-213ENST00000525209 ZKSCAN4Q969J2 545 aaPredicted RBP4.64□□□□□ -1.67
CD44-213ENST00000525209 INTS12Q96CB8 462 aaKnown RBP4.64□□□□□ -1.67
CD44-213ENST00000525209 EDC3Q96F86 508 aaKnown RBP4.64□□□□□ -1.67
CD44-213ENST00000525209 PPP1R10Q96QC0 940 aaKnown RBP4.64□□□□□ -1.67
CD44-213ENST00000525209 PRRX2Q99811 253 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 FERMT1Q9BQL6 677 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 HERC2P3Q9BVR0 1158 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 TMPRSS13Q9BYE2 586 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 ZNF341Q9BYN7 854 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 WDR11Q9BZH6 1224 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.64□□□□□ -1.67
CD44-213ENST00000525209 COQ10BQ9H8M1 238 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 BARX1Q9HBU1 254 aaPredicted RBP4.64□□□□□ -1.67
CD44-213ENST00000525209 UCKL1Q9NWZ5 548 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 GDAP2Q9NXN4 497 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 MARCH2Q9P0N8 246 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 SPASTQ9UBP0 616 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 ARMCX3Q9UH62 379 aaPredicted RBP4.64□□□□□ -1.67
CD44-213ENST00000525209 AMACRQ9UHK6 382 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 USP21Q9UK80 565 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 ACSL6Q9UKU0 697 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 PSME2Q9UL46 239 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 NAALAD2Q9Y3Q0 740 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 NEU2Q9Y3R4 380 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 RPTORQ8N122 1335 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 SALL3Q9BXA9 1300 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 PRG4Q92954 1404 aaPredicted RBP4.63□□□□□ -1.67
CD44-213ENST00000525209 PNMA6EA0A0J9YXQ4 647 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 LOC102723971A0A1B0GUV8 181 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 GOLGA6L7A0A1B0GV03 622 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 SMIM30A4D0T7 59 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 PRSS29PA6NIE9 313 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 FAM90A7PA6NKC0 464 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 SH2D7A6NKC9 451 aaPredicted RBP4.63□□□□□ -1.67
CD44-213ENST00000525209 FAM90A22PA8MWA6 464 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 FAM90A12PA8MX19 464 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 FAM90A23PA8MXZ1 464 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 KCNJ18B7U540 433 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 C22orf46C9J442 243 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 SLC33A1O00400 549 aaPredicted RBP4.63□□□□□ -1.67
CD44-213ENST00000525209 POLR2DO15514 142 aaKnown RBP4.63□□□□□ -1.67
CD44-213ENST00000525209 ZC3H11AO75152 810 aaKnown RBP eCLIP4.63□□□□□ -1.67
CD44-213ENST00000525209 TAF5LO75529 589 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 RPP40O75818 363 aaKnown RBP4.63□□□□□ -1.67
CD44-213ENST00000525209 ALDH1A2O94788 518 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 PRAMEF12O95522 483 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 LY86O95711 162 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 PDGFBP01127 241 aaPredicted RBP4.63□□□□□ -1.67
CD44-213ENST00000525209 CFIP05156 583 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 ZFYP08048 801 aaPredicted RBP4.63□□□□□ -1.67
CD44-213ENST00000525209 WEE2P0C1S8 567 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 ADH5P11766 374 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 NCF1P14598 390 aaPredicted RBP4.63□□□□□ -1.67
CD44-213ENST00000525209 ETS1P14921 441 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 ELNP15502 786 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 TPH1P17752 444 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 GABRB1P18505 474 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 ECHS1P30084 290 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 TTKP33981 857 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 PRKCIP41743 596 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 EPS15P42566 896 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 EPHB3P54753 998 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 NME5P56597 212 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 NRG3P56975 720 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 UFM1P61960 85 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 YBX1P67809 324 aaKnown RBP4.63□□□□□ -1.67
CD44-213ENST00000525209 OLR1P78380 273 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 PMP22Q01453 160 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 DPYSQ14117 519 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 BOP1Q14137 746 aaKnown RBP4.63□□□□□ -1.67
CD44-213ENST00000525209 ARHGEF7Q14155 803 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 GAMTQ14353 236 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 KCNJ12Q14500 433 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 NPY5RQ15761 445 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 DPYSL2Q16555 572 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 CCDC142Q17RM4 750 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 LEXMQ3ZCV2 418 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 SLC9B1Q4ZJI4 515 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 TDRD12Q587J7 1177 aaKnown RBP4.63□□□□□ -1.67
CD44-213ENST00000525209 TCTE1Q5JU00 501 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 ADGRF1Q5T601 910 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 RIPPLY2Q5TAB7 128 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 MROH9Q5TGP6 573 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 METTL11BQ5VVY1 283 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 DPY19L2P1Q6NXN4 242 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 CDC73Q6P1J9 531 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 SLC36A4Q6YBV0 504 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 ARMC9Q7Z3E5 817 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 ADCK2Q7Z695 626 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 TICAM1Q8IUC6 712 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 P3H2Q8IVL5 708 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 ELMOD2Q8IZ81 293 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 MINDY1Q8N5J2 469 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 MB21D1Q8N884 522 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 PI4KAP1Q8N8J0 262 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 FSIP1Q8NA03 581 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 IQUBQ8NA54 791 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 KDM1BQ8NB78 822 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms