RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 GSDMAQ96QA5 445 aa26.71■■□□□ 1.87
PVT1-219ENST00000523427 SLC12A6Q9UHW9 1150 aa26.71■■□□□ 1.87
PVT1-219ENST00000523427 TPX2Q9ULW0 747 aaKnown RBP26.71■■□□□ 1.87
PVT1-219ENST00000523427 MYLKQ15746 1914 aa26.71■■□□□ 1.87
PVT1-219ENST00000523427 ARID1BQ8NFD5 2236 aaPredicted RBP26.7■■□□□ 1.87
PVT1-219ENST00000523427 SIGLEC6O43699 453 aa26.7■■□□□ 1.86
PVT1-219ENST00000523427 ACADSBP45954 432 aa26.7■■□□□ 1.86
PVT1-219ENST00000523427 DAB2P98082 770 aa26.7■■□□□ 1.86
PVT1-219ENST00000523427 INSM1Q01101 510 aaPredicted RBP26.7■■□□□ 1.86
PVT1-219ENST00000523427 ILKQ13418 452 aa26.7■■□□□ 1.86
PVT1-219ENST00000523427 DSG4Q86SJ6 1040 aa26.7■■□□□ 1.86
PVT1-219ENST00000523427 LMO3Q8TAP4 145 aa26.7■■□□□ 1.86
PVT1-219ENST00000523427 SMARCE1Q969G3 411 aa26.7■■□□□ 1.86
PVT1-219ENST00000523427 RNF34Q969K3 372 aa26.7■■□□□ 1.86
PVT1-219ENST00000523427 NAF1Q96HR8 494 aaKnown RBP26.7■■□□□ 1.86
PVT1-219ENST00000523427 FAM204AQ9H8W3 233 aa26.7■■□□□ 1.86
PVT1-219ENST00000523427 ATP6V1DQ9Y5K8 247 aa26.7■■□□□ 1.86
PVT1-219ENST00000523427 KCNU1A8MYU2 1149 aa26.69■■□□□ 1.86
PVT1-219ENST00000523427 E5RJQ4 531 aa26.69■■□□□ 1.86
PVT1-219ENST00000523427 TRIM38O00635 465 aa26.69■■□□□ 1.86
PVT1-219ENST00000523427 PLRG1O43660 514 aaKnown RBP26.69■■□□□ 1.86
PVT1-219ENST00000523427 MAGEC1O60732 1142 aa26.69■■□□□ 1.86
PVT1-219ENST00000523427 LETM1O95202 739 aaPredicted RBP26.69■■□□□ 1.86
PVT1-219ENST00000523427 SULT2A1Q06520 285 aa26.69■■□□□ 1.86
PVT1-219ENST00000523427 TAF5Q15542 800 aa26.69■■□□□ 1.86
PVT1-219ENST00000523427 FAM46CQ5VWP2 391 aa26.69■■□□□ 1.86
PVT1-219ENST00000523427 KLHL10Q6JEL2 608 aa26.69■■□□□ 1.86
PVT1-219ENST00000523427 FRS2Q8WU20 508 aa26.69■■□□□ 1.86
PVT1-219ENST00000523427 KLHDC7BQ96G42 594 aa26.69■■□□□ 1.86
PVT1-219ENST00000523427 KREMEN1Q96MU8 473 aa26.69■■□□□ 1.86
PVT1-219ENST00000523427 POPDC2Q9HBU9 364 aa26.69■■□□□ 1.86
PVT1-219ENST00000523427 SLC25A13Q9UJS0 675 aa26.69■■□□□ 1.86
PVT1-219ENST00000523427 SLC31A1O15431 190 aa26.68■■□□□ 1.86
PVT1-219ENST00000523427 FFAR2O15552 330 aa26.68■■□□□ 1.86
PVT1-219ENST00000523427 PRLRP16471 622 aa26.68■■□□□ 1.86
PVT1-219ENST00000523427 ACTN2P35609 894 aa26.68■■□□□ 1.86
PVT1-219ENST00000523427 YWHAZP63104 245 aaKnown RBP26.68■■□□□ 1.86
PVT1-219ENST00000523427 CENPCQ03188 943 aa26.68■■□□□ 1.86
PVT1-219ENST00000523427 SLC12A1Q13621 1099 aa26.68■■□□□ 1.86
PVT1-219ENST00000523427 PROX2Q3B8N5 592 aa26.68■■□□□ 1.86
PVT1-219ENST00000523427 COBLL1Q53SF7 1204 aa26.68■■□□□ 1.86
PVT1-219ENST00000523427 Q6ZVU0 165 aa26.68■■□□□ 1.86
PVT1-219ENST00000523427 GPR155Q7Z3F1 870 aa26.68■■□□□ 1.86
PVT1-219ENST00000523427 FMR1NBQ8N0W7 255 aaPredicted RBP26.68■■□□□ 1.86
PVT1-219ENST00000523427 SNIP1Q8TAD8 396 aaKnown RBP26.68■■□□□ 1.86
PVT1-219ENST00000523427 TRIM62Q9BVG3 475 aa26.68■■□□□ 1.86
PVT1-219ENST00000523427 CAAP1Q9H8G2 361 aa26.68■■□□□ 1.86
PVT1-219ENST00000523427 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.68■■□□□ 1.86
PVT1-219ENST00000523427 DMTF1Q9Y222 760 aa26.68■■□□□ 1.86
PVT1-219ENST00000523427 C1QTNF3-AMACRE9PGA6 284 aa26.67■■□□□ 1.86
PVT1-219ENST00000523427 PSMA7O14818 248 aa26.67■■□□□ 1.86
PVT1-219ENST00000523427 KALRNO60229 2985 aa26.67■■□□□ 1.86
PVT1-219ENST00000523427 MT-CO3P00414 261 aa26.67■■□□□ 1.86
PVT1-219ENST00000523427 RPL34P49207 117 aaKnown RBP26.67■■□□□ 1.86
PVT1-219ENST00000523427 CXADRP78310 365 aa26.67■■□□□ 1.86
PVT1-219ENST00000523427 STIM1Q13586 685 aa26.67■■□□□ 1.86
PVT1-219ENST00000523427 DLG2Q15700 870 aa26.67■■□□□ 1.86
PVT1-219ENST00000523427 SETMARQ53H47 684 aaPredicted RBP26.67■■□□□ 1.86
PVT1-219ENST00000523427 RABGAP1LQ5R372 815 aa26.67■■□□□ 1.86
PVT1-219ENST00000523427 AGBL4Q5VU57 503 aa26.67■■□□□ 1.86
PVT1-219ENST00000523427 CXorf57Q6NSI4 855 aaKnown RBP26.67■■□□□ 1.86
PVT1-219ENST00000523427 TMC6Q7Z403 805 aa26.67■■□□□ 1.86
PVT1-219ENST00000523427 IQCHQ86VS3 1027 aa26.67■■□□□ 1.86
PVT1-219ENST00000523427 EHBP1Q8NDI1 1231 aa26.67■■□□□ 1.86
PVT1-219ENST00000523427 RPRD1AQ96P16 312 aaPredicted RBP26.67■■□□□ 1.86
PVT1-219ENST00000523427 SLC4A5Q9BY07 1137 aa26.67■■□□□ 1.86
PVT1-219ENST00000523427 GTPBP4Q9BZE4 634 aaKnown RBP26.67■■□□□ 1.86
PVT1-219ENST00000523427 KDM4CQ9H3R0 1056 aa26.67■■□□□ 1.86
PVT1-219ENST00000523427 ACP6Q9NPH0 428 aa26.67■■□□□ 1.86
PVT1-219ENST00000523427 DOCK9Q9BZ29 2069 aa26.66■■□□□ 1.86
PVT1-219ENST00000523427 PRAMEF26H0Y7S4 382 aa26.66■■□□□ 1.86
PVT1-219ENST00000523427 TK2O00142 265 aa26.66■■□□□ 1.86
PVT1-219ENST00000523427 SLC7A4O43246 635 aa26.66■■□□□ 1.86
PVT1-219ENST00000523427 ACP1P24666 158 aa26.66■■□□□ 1.86
PVT1-219ENST00000523427 GGCXP38435 758 aa26.66■■□□□ 1.86
PVT1-219ENST00000523427 HS1BP3Q53T59 392 aa26.66■■□□□ 1.86
PVT1-219ENST00000523427 FBXL22Q6P050 247 aa26.66■■□□□ 1.86
PVT1-219ENST00000523427 SLC25A45Q8N413 288 aa26.66■■□□□ 1.86
PVT1-219ENST00000523427 OR52K2Q8NGK3 314 aa26.66■■□□□ 1.86
PVT1-219ENST00000523427 CEP63Q96MT8 703 aa26.66■■□□□ 1.86
PVT1-219ENST00000523427 MED15Q96RN5 788 aa26.66■■□□□ 1.86
PVT1-219ENST00000523427 PRMT1Q99873 361 aaKnown RBP26.66■■□□□ 1.86
PVT1-219ENST00000523427 UCKL1Q9NWZ5 548 aa26.66■■□□□ 1.86
PVT1-219ENST00000523427 DDIT4Q9NX09 232 aa26.66■■□□□ 1.86
PVT1-219ENST00000523427 VANGL2Q9ULK5 521 aa26.66■■□□□ 1.86
PVT1-219ENST00000523427 PCDHB1Q9Y5F3 818 aa26.66■■□□□ 1.86
PVT1-219ENST00000523427 A0A1B0GVM2 712 aa26.65■■□□□ 1.86
PVT1-219ENST00000523427 GOLGA6L4A6NEF3 574 aa26.65■■□□□ 1.86
PVT1-219ENST00000523427 TCAF2A6NFQ2 919 aa26.65■■□□□ 1.86
PVT1-219ENST00000523427 THAP12O43422 761 aa26.65■■□□□ 1.86
PVT1-219ENST00000523427 RNGTTO60942 597 aaKnown RBP26.65■■□□□ 1.86
PVT1-219ENST00000523427 THEGLP0DJG4 465 aa26.65■■□□□ 1.86
PVT1-219ENST00000523427 MYF5P13349 255 aa26.65■■□□□ 1.86
PVT1-219ENST00000523427 CD44P16070 742 aaKnown RBP26.65■■□□□ 1.86
PVT1-219ENST00000523427 IRAK1P51617 712 aa26.65■■□□□ 1.86
PVT1-219ENST00000523427 CDK17Q00537 523 aa26.65■■□□□ 1.86
PVT1-219ENST00000523427 GCNT1Q02742 428 aa26.65■■□□□ 1.86
PVT1-219ENST00000523427 OVGP1Q12889 678 aa26.65■■□□□ 1.86
PVT1-219ENST00000523427 BEND5Q7L4P6 421 aa26.65■■□□□ 1.86
PVT1-219ENST00000523427 TRIM69Q86WT6 500 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms