RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 FOXF2Q12947 444 aa5.41□□□□□ -1.54
SKP1-211ENST00000523359 TRPC3Q13507 836 aa5.41□□□□□ -1.54
SKP1-211ENST00000523359 GXYLT1Q4G148 440 aa5.41□□□□□ -1.54
SKP1-211ENST00000523359 ATG16L1Q676U5 607 aa5.41□□□□□ -1.54
SKP1-211ENST00000523359 RTL10Q7L3V2 364 aa5.41□□□□□ -1.54
SKP1-211ENST00000523359 RNF144BQ7Z419 303 aa5.41□□□□□ -1.54
SKP1-211ENST00000523359 ZSCAN30Q86W11 494 aa5.41□□□□□ -1.54
SKP1-211ENST00000523359 SCN4BQ8IWT1 228 aa5.41□□□□□ -1.54
SKP1-211ENST00000523359 USP38Q8NB14 1042 aa5.41□□□□□ -1.54
SKP1-211ENST00000523359 OR52N4Q8NGI2 321 aa5.41□□□□□ -1.54
SKP1-211ENST00000523359 ZFPM2Q8WW38 1151 aa5.41□□□□□ -1.54
SKP1-211ENST00000523359 DDB2Q92466 427 aa5.41□□□□□ -1.54
SKP1-211ENST00000523359 KAT2BQ92831 832 aa5.41□□□□□ -1.54
SKP1-211ENST00000523359 TMEM160Q9NX00 188 aa5.41□□□□□ -1.54
SKP1-211ENST00000523359 ARL15Q9NXU5 204 aa5.41□□□□□ -1.54
SKP1-211ENST00000523359 PKP3Q9Y446 797 aa5.41□□□□□ -1.54
SKP1-211ENST00000523359 DYTNA2CJ06 578 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 PRSS47A8MTI9 375 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 PEX12O00623 359 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 SYN3O14994 580 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 HOXC11O43248 304 aaPredicted RBP5.4□□□□□ -1.54
SKP1-211ENST00000523359 SGPL1O95470 568 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 TUBB4AP04350 444 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 ARSAP15289 507 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 RRM1P23921 792 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 TERF1P54274 439 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 MEX3CQ5U5Q3 659 aaKnown RBP5.4□□□□□ -1.54
SKP1-211ENST00000523359 LIPMQ5VYY2 423 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 SLC30A9Q6PML9 568 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 C16orf54Q6UWD8 224 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 GLCCI1Q86VQ1 547 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 PAQR4Q8N4S7 273 aaPredicted RBP5.4□□□□□ -1.54
SKP1-211ENST00000523359 ESX1Q8N693 406 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 NKAIN3Q8N8D7 197 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 ARL14EPQ8N8R7 260 aaPredicted RBP5.4□□□□□ -1.54
SKP1-211ENST00000523359 IL17REQ8NFR9 667 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.4□□□□□ -1.54
SKP1-211ENST00000523359 FAM110DQ8TAY7 271 aaPredicted RBP5.4□□□□□ -1.54
SKP1-211ENST00000523359 IP6K1Q92551 441 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 MASTLQ96GX5 879 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 NAF1Q96HR8 494 aaKnown RBP5.4□□□□□ -1.54
SKP1-211ENST00000523359 CTDSP1Q9GZU7 261 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 ACAD9Q9H845 621 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 MOV10Q9HCE1 1003 aaKnown RBP5.4□□□□□ -1.54
SKP1-211ENST00000523359 ERVK-5Q9HDB9 667 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 TXNRD2Q9NNW7 524 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 FBXO4Q9UKT5 387 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 GDAQ9Y2T3 454 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 RABGAP1Q9Y3P9 1069 aa5.4□□□□□ -1.54
SKP1-211ENST00000523359 A0A1B0GVC2 190 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 INO80B-WBP1J3KQ70 363 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 PPP6CO00743 305 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 TSPAN3O60637 253 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 CYP4B1P13584 511 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 HOXB9P17482 250 aaPredicted RBP5.39□□□□□ -1.55
SKP1-211ENST00000523359 CERS1P27544 350 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 GSTM2P28161 218 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 EPHB2P29323 1055 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 ARHGAP25P42331 645 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 TUBP50607 506 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 RPS6KA3P51812 740 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 FAM133BQ5BKY9 247 aaKnown RBP5.39□□□□□ -1.55
SKP1-211ENST00000523359 ANO7Q6IWH7 933 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 DENND1BQ6P3S1 775 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 CFAP161Q6P656 301 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 HEATR4Q86WZ0 1026 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 GALNT16Q8N428 558 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 C2CD4CQ8TF44 421 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 HTRA1Q92743 480 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 HVCN1Q96D96 273 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 FAM118BQ9BPY3 351 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 SCNM1Q9BWG6 230 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 QTRT1Q9BXR0 403 aaKnown RBP5.39□□□□□ -1.55
SKP1-211ENST00000523359 GPR63Q9BZJ6 419 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 STN1Q9H668 368 aaKnown RBP5.39□□□□□ -1.55
SKP1-211ENST00000523359 IPO11Q9UI26 975 aaKnown RBP5.39□□□□□ -1.55
SKP1-211ENST00000523359 ACAD8Q9UKU7 415 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 SLC8A2Q9UPR5 921 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 DTX4Q9Y2E6 619 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 AFG3L2Q9Y4W6 797 aa5.39□□□□□ -1.55
SKP1-211ENST00000523359 SMIM35A0A1B0GVV1 85 aa5.38□□□□□ -1.55
SKP1-211ENST00000523359 A0A1W2PRQ8 180 aa5.38□□□□□ -1.55
SKP1-211ENST00000523359 C2CD4BA6NLJ0 364 aa5.38□□□□□ -1.55
SKP1-211ENST00000523359 CCNT1O60563 726 aaKnown RBP5.38□□□□□ -1.55
SKP1-211ENST00000523359 RPN1P04843 607 aaKnown RBP5.38□□□□□ -1.55
SKP1-211ENST00000523359 WEE2P0C1S8 567 aa5.38□□□□□ -1.55
SKP1-211ENST00000523359 TNNT1P13805 278 aa5.38□□□□□ -1.55
SKP1-211ENST00000523359 XBP1P17861 261 aa5.38□□□□□ -1.55
SKP1-211ENST00000523359 TFEBP19484 476 aa5.38□□□□□ -1.55
SKP1-211ENST00000523359 SCP2P22307 547 aa5.38□□□□□ -1.55
SKP1-211ENST00000523359 MVDP53602 400 aa5.38□□□□□ -1.55
SKP1-211ENST00000523359 OAZ1P54368 228 aa5.38□□□□□ -1.55
SKP1-211ENST00000523359 SLC12A2P55011 1212 aa5.38□□□□□ -1.55
SKP1-211ENST00000523359 ARHGAP8P85298 464 aa5.38□□□□□ -1.55
SKP1-211ENST00000523359 HSF1Q00613 529 aa5.38□□□□□ -1.55
SKP1-211ENST00000523359 ZBTB16Q05516 673 aa5.38□□□□□ -1.55
SKP1-211ENST00000523359 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.38□□□□□ -1.55
SKP1-211ENST00000523359 EARS2Q5JPH6 523 aaKnown RBP5.38□□□□□ -1.55
SKP1-211ENST00000523359 WDR45BQ5MNZ6 344 aa5.38□□□□□ -1.55
SKP1-211ENST00000523359 C10orf76Q5T2E6 689 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms