RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 RNASEH2AO75792 299 aaKnown RBP19.21■□□□□ 0.67
SPIDR-220ENST00000522900 NNMTP40261 264 aa19.21■□□□□ 0.67
SPIDR-220ENST00000522900 PSMD8P48556 350 aa19.21■□□□□ 0.67
SPIDR-220ENST00000522900 CSNK1EP49674 416 aaKnown RBP19.21■□□□□ 0.67
SPIDR-220ENST00000522900 METAP1P53582 386 aa19.21■□□□□ 0.67
SPIDR-220ENST00000522900 GALCP54803 685 aa19.21■□□□□ 0.67
SPIDR-220ENST00000522900 ZNF252P-AS1Q0IIN9 211 aa19.21■□□□□ 0.67
SPIDR-220ENST00000522900 C15orf59Q2T9L4 293 aaPredicted RBP19.21■□□□□ 0.67
SPIDR-220ENST00000522900 ARCQ7LC44 396 aa19.21■□□□□ 0.67
SPIDR-220ENST00000522900 RXFP2Q8WXD0 754 aa19.21■□□□□ 0.67
SPIDR-220ENST00000522900 PSMB7Q99436 277 aa19.21■□□□□ 0.67
SPIDR-220ENST00000522900 IL21RQ9HBE5 538 aa19.21■□□□□ 0.67
SPIDR-220ENST00000522900 VPS28Q9UK41 221 aa19.21■□□□□ 0.67
SPIDR-220ENST00000522900 SCML1Q9UN30 329 aa19.21■□□□□ 0.67
SPIDR-220ENST00000522900 UPK3BL1B0FP48 263 aa19.2■□□□□ 0.66
SPIDR-220ENST00000522900 UPK3BL2E5RIL1 263 aa19.2■□□□□ 0.66
SPIDR-220ENST00000522900 E9PAM4 449 aa19.2■□□□□ 0.66
SPIDR-220ENST00000522900 PLK4O00444 970 aa19.2■□□□□ 0.66
SPIDR-220ENST00000522900 SNAP91O60641 907 aa19.2■□□□□ 0.66
SPIDR-220ENST00000522900 SRGAP2O75044 1071 aa19.2■□□□□ 0.66
SPIDR-220ENST00000522900 ENDOD1O94919 500 aa19.2■□□□□ 0.66
SPIDR-220ENST00000522900 TOP3BO95985 862 aaKnown RBP19.2■□□□□ 0.66
SPIDR-220ENST00000522900 MT-CO1P00395 513 aa19.2■□□□□ 0.66
SPIDR-220ENST00000522900 IGHV4-34P06331 123 aa19.2■□□□□ 0.66
SPIDR-220ENST00000522900 RDXP35241 583 aaKnown RBP19.2■□□□□ 0.66
SPIDR-220ENST00000522900 FAM193AP78312 1265 aa19.2■□□□□ 0.66
SPIDR-220ENST00000522900 CCDC14Q49A88 953 aa19.2■□□□□ 0.66
SPIDR-220ENST00000522900 ACCSLQ4AC99 568 aa19.2■□□□□ 0.66
SPIDR-220ENST00000522900 KIAA0895LQ68EN5 471 aa19.2■□□□□ 0.66
SPIDR-220ENST00000522900 TFAP2DQ7Z6R9 452 aa19.2■□□□□ 0.66
SPIDR-220ENST00000522900 CAMK1GQ96NX5 476 aa19.2■□□□□ 0.66
SPIDR-220ENST00000522900 OMDQ99983 421 aa19.2■□□□□ 0.66
SPIDR-220ENST00000522900 ORAI3Q9BRQ5 295 aa19.2■□□□□ 0.66
SPIDR-220ENST00000522900 MAGEB5Q9BZ81 275 aa19.2■□□□□ 0.66
SPIDR-220ENST00000522900 TM9SF3Q9HD45 589 aa19.2■□□□□ 0.66
SPIDR-220ENST00000522900 PI4KAP42356 2102 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 CNOT1A5YKK6 2376 aaKnown RBP19.19■□□□□ 0.66
SPIDR-220ENST00000522900 IGLV3-10A0A075B6K4 115 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 A0A0D9SEW6 157 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 SPAARA0A1B0GVQ0 90 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 ATP9BO43861 1147 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 IL1BP01584 269 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 RHOCP08134 193 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 VASPP50552 380 aaPredicted RBP19.19■□□□□ 0.66
SPIDR-220ENST00000522900 DLG2Q15700 870 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 CDO1Q16878 200 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 CLEC16AQ2KHT3 1053 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 CAVIN1Q6NZI2 390 aaKnown RBP19.19■□□□□ 0.66
SPIDR-220ENST00000522900 NCEH1Q6PIU2 408 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 LAYNQ6UX15 382 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 LRRC31Q6UY01 552 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 TRIM72Q6ZMU5 477 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 HAPLN3Q96S86 360 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 PPP1R9BQ96SB3 815 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 ZDHHC5Q9C0B5 715 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 MUC3BQ9H195 1237 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 SLC32A1Q9H598 525 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 EBF2Q9HAK2 575 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 SLC25A13Q9UJS0 675 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 ANGPTL2Q9UKU9 493 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 SARDHQ9UL12 918 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 PAXBP1Q9Y5B6 917 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 NUMA1Q14980 2115 aa19.19■□□□□ 0.66
SPIDR-220ENST00000522900 C2CD4BA6NLJ0 364 aa19.18■□□□□ 0.66
SPIDR-220ENST00000522900 K7ERQ8 282 aa19.18■□□□□ 0.66
SPIDR-220ENST00000522900 SH3BP5O60239 455 aa19.18■□□□□ 0.66
SPIDR-220ENST00000522900 C5AR1P21730 350 aa19.18■□□□□ 0.66
SPIDR-220ENST00000522900 CD27P26842 260 aa19.18■□□□□ 0.66
SPIDR-220ENST00000522900 DRD3P35462 400 aa19.18■□□□□ 0.66
SPIDR-220ENST00000522900 ELAVL3Q14576 367 aaKnown RBP19.18■□□□□ 0.66
SPIDR-220ENST00000522900 HLA-BQ31612 363 aa19.18■□□□□ 0.66
SPIDR-220ENST00000522900 KCNT1Q5JUK3 1230 aa19.18■□□□□ 0.66
SPIDR-220ENST00000522900 Q6ZVU0 165 aa19.18■□□□□ 0.66
SPIDR-220ENST00000522900 SH2D3CQ8N5H7 860 aa19.18■□□□□ 0.66
SPIDR-220ENST00000522900 AGPAT1Q99943 283 aa19.18■□□□□ 0.66
SPIDR-220ENST00000522900 GAREM1Q9H706 876 aa19.18■□□□□ 0.66
SPIDR-220ENST00000522900 ADAM22Q9P0K1 906 aa19.18■□□□□ 0.66
SPIDR-220ENST00000522900 ZNF212Q9UDV6 495 aa19.18■□□□□ 0.66
SPIDR-220ENST00000522900 ADAMTS1Q9UHI8 967 aa19.18■□□□□ 0.66
SPIDR-220ENST00000522900 C10orf142B7Z368 130 aa19.17■□□□□ 0.66
SPIDR-220ENST00000522900 KCNK3O14649 394 aa19.17■□□□□ 0.66
SPIDR-220ENST00000522900 ADH1BP00325 375 aa19.17■□□□□ 0.66
SPIDR-220ENST00000522900 KRT3P12035 628 aa19.17■□□□□ 0.66
SPIDR-220ENST00000522900 SRCP12931 536 aa19.17■□□□□ 0.66
SPIDR-220ENST00000522900 GOT1P17174 413 aa19.17■□□□□ 0.66
SPIDR-220ENST00000522900 SPINK2P20155 84 aa19.17■□□□□ 0.66
SPIDR-220ENST00000522900 GLDCP23378 1020 aa19.17■□□□□ 0.66
SPIDR-220ENST00000522900 RFC1P35251 1148 aaPredicted RBP19.17■□□□□ 0.66
SPIDR-220ENST00000522900 ADRA1BP35368 520 aa19.17■□□□□ 0.66
SPIDR-220ENST00000522900 NSFP46459 744 aaKnown RBP19.17■□□□□ 0.66
SPIDR-220ENST00000522900 AFF3P51826 1226 aaKnown RBP19.17■□□□□ 0.66
SPIDR-220ENST00000522900 SHC2P98077 582 aa19.17■□□□□ 0.66
SPIDR-220ENST00000522900 FOXC1Q12948 553 aa19.17■□□□□ 0.66
SPIDR-220ENST00000522900 KIF19Q2TAC6 998 aa19.17■□□□□ 0.66
SPIDR-220ENST00000522900 POM121L1PQ3SYA9 428 aa19.17■□□□□ 0.66
SPIDR-220ENST00000522900 LINGO4Q6UY18 593 aa19.17■□□□□ 0.66
SPIDR-220ENST00000522900 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.17■□□□□ 0.66
SPIDR-220ENST00000522900 SETD3Q86TU7 594 aaPredicted RBP19.17■□□□□ 0.66
SPIDR-220ENST00000522900 PHF13Q86YI8 300 aaPredicted RBP19.17■□□□□ 0.66
SPIDR-220ENST00000522900 OR7D4Q8NG98 312 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms