RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 RAB44Q7Z6P3 723 aaPredicted RBP10.36□□□□□ -0.75
MCF2-209ENST00000520602 B3GALT6Q96L58 329 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 KLHL5Q96PQ7 755 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 VAT1Q99536 393 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 ACBD6Q9BR61 282 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 BRD8Q9H0E9 1235 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 FBXO44Q9H4M3 255 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 FAM96AQ9H5X1 160 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 MARCH2Q9P0N8 246 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.36□□□□□ -0.75
MCF2-209ENST00000520602 MAGEB16A2A368 324 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 SOAT2O75908 522 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 CCND3P30281 292 aaPredicted RBP10.36□□□□□ -0.75
MCF2-209ENST00000520602 OR1E1P30953 314 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 SEMA5AQ13591 1074 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 CSHL1Q14406 222 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 LRRC36Q1X8D7 754 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 MORN1Q5T089 497 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 KYAT3Q6YP21 454 aaKnown RBP10.36□□□□□ -0.75
MCF2-209ENST00000520602 MYLK4Q86YV6 388 aaPredicted RBP10.36□□□□□ -0.75
MCF2-209ENST00000520602 LINC01465Q8N7H1 131 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 TRIB2Q92519 343 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 TBL1YQ9BQ87 522 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 IL22Q9GZX6 179 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 ILKAPQ9H0C8 392 aaPredicted RBP10.36□□□□□ -0.75
MCF2-209ENST00000520602 KANSL3Q9P2N6 904 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 CDY1Q9Y6F8 540 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 CA12O43570 354 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 SERPINE1P05121 402 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 CALB2P22676 271 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 IGFBP6P24592 240 aaPredicted RBP10.36□□□□□ -0.75
MCF2-209ENST00000520602 HIC1Q14526 733 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 CNGA3Q16281 694 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 CST9Q5W186 159 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 RSPH1Q8WYR4 309 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 SIGLEC10Q96LC7 697 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 TMEM209Q96SK2 561 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 AGAP2Q99490 1192 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 SNX15Q9NRS6 342 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 LOXHD1Q8IVV2 1947 aa10.36□□□□□ -0.75
MCF2-209ENST00000520602 PRRG1O14668 218 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 TP73O15350 636 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 HARS2P49590 506 aaKnown RBP10.35□□□□□ -0.75
MCF2-209ENST00000520602 RENBPP51606 427 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 OCRLQ01968 901 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 ANKRD20A4Q4UJ75 823 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 CLNKQ7Z7G1 428 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 C10orf107Q8IVU9 208 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 KIRREL3Q8IZU9 778 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 ARHGAP18Q8N392 663 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 SKA2Q8WVK7 121 aaPredicted RBP10.35□□□□□ -0.75
MCF2-209ENST00000520602 NMRAL1Q9HBL8 299 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 SMPD4Q9NXE4 827 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.35□□□□□ -0.75
MCF2-209ENST00000520602 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.35□□□□□ -0.75
MCF2-209ENST00000520602 MEI4A8MW99 385 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 MAP3K7O43318 606 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 TYROBPO43914 113 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 RAMP2O60895 175 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 ENTPD5O75356 428 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 SKAP2O75563 359 aaPredicted RBP10.35□□□□□ -0.75
MCF2-209ENST00000520602 CHRNA1P02708 482 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 GRK2P25098 689 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 LRPAP1P30533 357 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 SERPINB5P36952 375 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 PBX3P40426 434 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 RCN1Q15293 331 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 PSMD5Q16401 504 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 NUP93Q8N1F7 819 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 LZTR1Q8N653 840 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 APBB2Q92870 758 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 ATP6V1E2Q96A05 226 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 MUC3BQ9H195 1237 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 HMX1Q9NP08 348 aaPredicted RBP10.35□□□□□ -0.75
MCF2-209ENST00000520602 MAN1C1Q9NR34 630 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 ARL8BQ9NVJ2 186 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 ZNF358Q9NW07 568 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 NSMCE4AQ9NXX6 385 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 Q9Y3F1 56 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 ERI2A8K979 691 aaKnown RBP10.35□□□□□ -0.75
MCF2-209ENST00000520602 E7ESA3 106 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 PFDN6O15212 129 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 KLHL2O95198 593 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 LMNAP02545 664 aaKnown RBP10.35□□□□□ -0.75
MCF2-209ENST00000520602 BPGMP07738 259 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 MLNP12872 115 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 PLK1P53350 603 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 NAGLUP54802 743 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 CCL23P55773 120 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 SLC12A1Q13621 1099 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 DLG2Q15700 870 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 RGS9BPQ6ZS82 235 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 PIWIL2Q8TC59 973 aaKnown RBP10.35□□□□□ -0.75
MCF2-209ENST00000520602 SH3TC2Q8TF17 1288 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 KCNN1Q92952 543 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 PPP1R10Q96QC0 940 aaKnown RBP10.35□□□□□ -0.75
MCF2-209ENST00000520602 BTBD10Q9BSF8 475 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 NMUR2Q9GZQ4 415 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 KATNBL1Q9H079 304 aa10.35□□□□□ -0.75
MCF2-209ENST00000520602 PRDM16Q9HAZ2 1276 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms