RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 CERS5Q8N5B7 392 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 ZKSCAN4Q969J2 545 aaPredicted RBP3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 TIFAQ96CG3 184 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 HSPBAP1Q96EW2 488 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 MVB12AQ96EY5 273 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 SLC35A4Q96G79 324 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 THUMPD2Q9BTF0 503 aaKnown RBP3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 TUBB6Q9BUF5 446 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 STK31Q9BXU1 1019 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 TMEM39BQ9GZU3 492 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 OSBPL5Q9H0X9 879 aaPredicted RBP3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 RBM38Q9H0Z9 239 aaKnown RBP3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 SLC28A3Q9HAS3 691 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 TCF7L1Q9HCS4 588 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 SNX15Q9NRS6 342 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 DNMT3BQ9UBC3 853 aaKnown RBP3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PCDHA6Q9UN73 950 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 LRRFIP2Q9Y608 721 aaKnown RBP3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 ZHX2Q9Y6X8 837 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 LAMB4A4D0S4 1761 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 SIPA1L3O60292 1781 aaPredicted RBP3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 LAMB1P07942 1786 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 VCANP13611 3396 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PFASO15067 1338 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 TMEM272A0A1B0GTI8 110 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 SLC15A5A6NIM6 579 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PI4K2BG5E9Z4 385 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 LDB3O75112 727 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 IL33O95760 270 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 GRPP07492 148 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 TCEA1P23193 301 aaKnown RBP3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 AKAP5P24588 427 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PPP2R1AP30153 589 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 LRPAP1P30533 357 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 GKP32189 559 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 MLH1P40692 756 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CXCR3P49682 368 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 IRX3P78415 501 aaPredicted RBP3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PTGR1Q14914 329 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 SHHQ15465 462 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 LRRC26Q2I0M4 334 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PSRC1Q6PGN9 363 aaPredicted RBP3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CCDC129Q6ZRS4 1044 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 ANKRD33Q7Z3H0 272 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 ABRAQ8N0Z2 381 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 ANKRD13CQ8N6S4 541 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CELF5Q8N6W0 485 aaKnown RBP3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 LINS1Q8NG48 757 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 DIS3LQ8TF46 1054 aaKnown RBP3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 EDC3Q96F86 508 aaKnown RBP3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 MYD88Q99836 296 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 SF3B5Q9BWJ5 86 aaKnown RBP3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 IDI2Q9BXS1 227 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 TTYH1Q9H313 450 aaPredicted RBP3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CXorf36Q9H7Y0 433 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PCDH12Q9NPG4 1184 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CD93Q9NPY3 652 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 TMOD4Q9NZQ9 345 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 XPR1Q9UBH6 696 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 DDX20Q9UHI6 824 aaKnown RBP3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 HERC5Q9UII4 1024 aaKnown RBP3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 GJD2Q9UKL4 321 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PCDHA7Q9UN72 937 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 MED16Q9Y2X0 877 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 LUC7L2Q9Y383 392 aaKnown RBP3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 RABGAP1Q9Y3P9 1069 aa3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 SPTBN5Q9NRC6 3674 aaKnown RBP3.29□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PDS5AQ29RF7 1337 aaKnown RBP3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 SALL1Q9NSC2 1324 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 A0A1B0GUL7 405 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 SEPT4O43236 478 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 NCK2O43639 380 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PMPCBO75439 489 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 ALDH2P05091 517 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 ASNSP08243 561 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CLTBP09497 229 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 IFIT1P09914 478 aaKnown RBP3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 TBXAS1P24557 533 aaPredicted RBP3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 HOXA11P31270 313 aaPredicted RBP3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 COPB2P35606 906 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 MYO1EQ12965 1108 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 GCKRQ14397 625 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 BRDTQ58F21 947 aaPredicted RBP3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 KHDC1LQ5JSQ8 128 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 ATAT1Q5SQI0 421 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 APOBEC3HQ6NTF7 200 aaKnown RBP3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 SLC39A5Q6ZMH5 540 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PTCHD4Q6ZW05 846 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 ZNF280BQ86YH2 543 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 TRIB2Q92519 343 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 USP6NLQ92738 828 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 HPS3Q969F9 1004 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 WBP2Q969T9 261 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CHMP4CQ96CF2 233 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CDK5RAP3Q96JB5 506 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 MRGPRX1Q96LB2 322 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 NUP88Q99567 741 aaPredicted RBP3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 MESP1Q9BRJ9 268 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 MXD3Q9BW11 206 aa3.28□□□□□ -1.88
ATP6V1C1-204ENST00000518959 DHX36Q9H2U1 1008 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms