RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 CFHR1Q03591 330 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 TLE3Q04726 772 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 ZRSR1Q15695 479 aaKnown RBP6.33□□□□□ -1.4
PABPC1-207ENST00000518716 KCNT1Q5JUK3 1230 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 HECTD3Q5T447 861 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 TDRD10Q5VZ19 366 aaKnown RBP6.33□□□□□ -1.4
PABPC1-207ENST00000518716 BTBD8Q5XKL5 378 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 GRAMD4Q6IC98 578 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 DHRS13Q6UX07 377 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 TMPRSS6Q8IU80 811 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 NUP93Q8N1F7 819 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 OR5B17Q8NGF7 314 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 SCAMP5Q8TAC9 235 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 CACTINQ8WUQ7 758 aaKnown RBP6.33□□□□□ -1.4
PABPC1-207ENST00000518716 POMGNT1Q8WZA1 660 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 RAD54LQ92698 747 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 IGSF8Q969P0 613 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 ALKBH8Q96BT7 664 aaKnown RBP6.33□□□□□ -1.4
PABPC1-207ENST00000518716 HVCN1Q96D96 273 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 SAAL1Q96ER3 474 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 HPDLQ96IR7 371 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 AK8Q96MA6 479 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 FCRL3Q96P31 734 aaPredicted RBP6.33□□□□□ -1.4
PABPC1-207ENST00000518716 SLITRK1Q96PX8 696 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 MRPL45Q9BRJ2 306 aaKnown RBP6.33□□□□□ -1.4
PABPC1-207ENST00000518716 FAM213AQ9BRX8 229 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 B3GNT5Q9BYG0 378 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 ZNF518BQ9C0D4 1074 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 MTMR12Q9C0I1 747 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 CCSER2Q9H7U1 834 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 PDE11AQ9HCR9 933 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 DNAJC17Q9NVM6 304 aaKnown RBP6.33□□□□□ -1.4
PABPC1-207ENST00000518716 INTS13Q9NVM9 706 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 WDR35Q9P2L0 1181 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 THAP10Q9P2Z0 257 aaPredicted RBP6.33□□□□□ -1.4
PABPC1-207ENST00000518716 CHORDC1Q9UHD1 332 aaPredicted RBP6.33□□□□□ -1.4
PABPC1-207ENST00000518716 EIF2B4Q9UI10 523 aaKnown RBP6.33□□□□□ -1.4
PABPC1-207ENST00000518716 SLC27A6Q9Y2P4 619 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 STON1Q9Y6Q2 735 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 COL5A1P20908 1838 aaPredicted RBP6.33□□□□□ -1.4
PABPC1-207ENST00000518716 MYH10P35580 1976 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 VWA3AA6NCI4 1184 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 CAPN8A6NHC0 703 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 MEI4A8MW99 385 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 H0Y8X5 98 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 NPC1O15118 1278 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 GADD45BO75293 160 aaPredicted RBP6.32□□□□□ -1.4
PABPC1-207ENST00000518716 RTN3O95197 1032 aaPredicted RBP6.32□□□□□ -1.4
PABPC1-207ENST00000518716 TBX18O95935 607 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 CST3P01034 146 aaPredicted RBP6.32□□□□□ -1.4
PABPC1-207ENST00000518716 PENKP01210 267 aaPredicted RBP6.32□□□□□ -1.4
PABPC1-207ENST00000518716 C1SP09871 688 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 PTPN1P18031 435 aaKnown RBP6.32□□□□□ -1.4
PABPC1-207ENST00000518716 ANXA13P27216 316 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 DDIT3P35638 169 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 GNL1P36915 607 aaPredicted RBP6.32□□□□□ -1.4
PABPC1-207ENST00000518716 IL12RB1P42701 662 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 CTSKP43235 329 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 AFF3P51826 1226 aaKnown RBP6.32□□□□□ -1.4
PABPC1-207ENST00000518716 CASP5P51878 434 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 NEK4P51957 841 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 HMGN5P82970 282 aaKnown RBP6.32□□□□□ -1.4
PABPC1-207ENST00000518716 GRIN1Q05586 938 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 SRSF1Q07955 248 aaKnown RBP eCLIP6.32□□□□□ -1.4
PABPC1-207ENST00000518716 SHBQ15464 509 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 ANO4Q32M45 955 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 RILPL1Q5EBL4 403 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 MDH1BQ5I0G3 518 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 L1TD1Q5T7N2 865 aaKnown RBP6.32□□□□□ -1.4
PABPC1-207ENST00000518716 SDE2Q6IQ49 451 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 FBXL19Q6PCT2 694 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 GPR155Q7Z3F1 870 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 ERICH1Q86X53 443 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 CCDC83Q8IWF9 413 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 PDZD8Q8NEN9 1154 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 ZMIZ2Q8NF64 920 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 RFFLQ8WZ73 363 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 ISL2Q96A47 359 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 DNAJC19Q96DA6 116 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 NXPE2Q96DL1 559 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 ERLEC1Q96DZ1 483 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 PIWIL1Q96J94 861 aaKnown RBP6.32□□□□□ -1.4
PABPC1-207ENST00000518716 KCNK16Q96T55 309 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 CBWD1Q9BRT8 395 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 NUP58Q9BVL2 599 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 ELOVL4Q9GZR5 314 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 DPEP3Q9H4B8 488 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 ZCCHC4Q9H5U6 513 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 C6orf106Q9H6K1 298 aaPredicted RBP6.32□□□□□ -1.4
PABPC1-207ENST00000518716 COMMD8Q9NX08 183 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 OSER1Q9NX31 292 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 RBAKQ9NYW8 714 aaPredicted RBP6.32□□□□□ -1.4
PABPC1-207ENST00000518716 LIMCH1Q9UPQ0 1083 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 ANKRD6Q9Y2G4 727 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.32□□□□□ -1.4
PABPC1-207ENST00000518716 SH3BP1Q9Y3L3 701 aa6.32□□□□□ -1.4
PABPC1-207ENST00000518716 FRMD3A2A2Y4 597 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 NEDD8-MDP1E9PL57 170 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 CLDN5O00501 218 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 KCNK3O14649 394 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms