RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 RAB20Q9NX57 234 aa12.07□□□□□ -0.48
TMEM55A-202ENST00000518359 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.07□□□□□ -0.48
TMEM55A-202ENST00000518359 NCKIPSDQ9NZQ3 722 aa12.07□□□□□ -0.48
TMEM55A-202ENST00000518359 COL27A1Q8IZC6 1860 aaPredicted RBP12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 ALOX15BO15296 676 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 LTFP02788 710 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 NTRK1P04629 796 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 VDRP11473 427 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 MLLT3P42568 568 aaPredicted RBP12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 STK19P49842 368 aaPredicted RBP12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 CCDC15Q0P6D6 951 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 NFATC3Q12968 1075 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 NNTQ13423 1086 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 POM121L1PQ3SYA9 428 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 DCAF6Q58WW2 860 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 AGBL4Q5VU57 503 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 XKR5Q6UX68 686 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 GRAMD1CQ8IYS0 662 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 APCDD1Q8J025 514 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 ARL14Q8N4G2 192 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 TMEM145Q8NBT3 493 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 UBA3Q8TBC4 463 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 IFI44Q8TCB0 444 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 CCDC47Q96A33 483 aaKnown RBP12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 IFT43Q96FT9 208 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 SLC46A1Q96NT5 459 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 PPP1R9BQ96SB3 815 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 CALN1Q9BXU9 219 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 NUCKS1Q9H1E3 243 aaKnown RBP12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 SLC25A13Q9UJS0 675 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 KIAA1257Q9ULG3 409 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 TLR6Q9Y2C9 796 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 PCDHGA8Q9Y5G5 932 aa12.06□□□□□ -0.48
TMEM55A-202ENST00000518359 SCAMP1O15126 338 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 FBXO21O94952 628 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 MOCS2O96007 188 aaPredicted RBP12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 APOEP02649 317 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 MYL1P05976 194 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 ZNF18P17022 549 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 AKT2P31751 481 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 ME1P48163 572 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 OXCT1P55809 520 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 HNRNPKP61978 463 aaKnown RBP eCLIP12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 SKOR1P84550 965 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 SRSF1Q07955 248 aaKnown RBP eCLIP12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 CNTN1Q12860 1018 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 ZSCAN23Q3MJ62 389 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 C6orf132Q5T0Z8 1188 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 RESP18Q5W5W9 173 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 ZCCHC8Q6NZY4 707 aaKnown RBP12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 NEK5Q6P3R8 708 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 ATG14Q6ZNE5 492 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 LURAP1LQ8IV03 231 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 LGI2Q8N0V4 545 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 TPCN2Q8NHX9 752 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 FAM174AQ8TBP5 190 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 SEMA4DQ92854 862 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 INTS4Q96HW7 963 aaKnown RBP12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 FCRL2Q96LA5 508 aaPredicted RBP12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 MYOCQ99972 504 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 ARHGAP9Q9BRR9 750 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 CA5BQ9Y2D0 317 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 KIF26BQ2KJY2 2108 aa12.05□□□□□ -0.48
TMEM55A-202ENST00000518359 O00370 1275 aa12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 SLC31A1O15431 190 aa12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 TCEA3O75764 348 aa12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 GIMD1P0DJR0 217 aa12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 VAV1P15498 845 aa12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 HNRNPA2B1P22626 353 aaKnown RBP12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 RGS7P49802 495 aa12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 METAP1P53582 386 aa12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 ADAM9Q13443 819 aa12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 CUL2Q13617 745 aa12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 ARL13BQ3SXY8 428 aa12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 ACCSLQ4AC99 568 aa12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 TTC39BQ5VTQ0 682 aaPredicted RBP12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 RBM44Q6ZP01 1051 aaKnown RBP12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 CHSY1Q86X52 802 aa12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 DCP2Q8IU60 420 aaKnown RBP12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 WDR36Q8NI36 951 aaKnown RBP12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 DQX1Q8TE96 717 aaKnown RBP12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 ERCC4Q92889 916 aaPredicted RBP12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 RNF34Q969K3 372 aa12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 MYEOVQ96EZ4 313 aa12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 PAGE5Q96GU1 130 aa12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 ATXN7L3BQ96GX2 97 aa12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 CCNL2Q96S94 520 aaPredicted RBP12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 TRIM62Q9BVG3 475 aa12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 TRIM4Q9C037 500 aa12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 DNAJC28Q9NX36 388 aa12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 SERTAD1Q9UHV2 236 aa12.04□□□□□ -0.48
TMEM55A-202ENST00000518359 TRPM6Q9BX84 2022 aa12.03□□□□□ -0.48
TMEM55A-202ENST00000518359 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.03□□□□□ -0.48
TMEM55A-202ENST00000518359 A0A1W2PQU0 124 aa12.03□□□□□ -0.48
TMEM55A-202ENST00000518359 A6NNZ2 444 aa12.03□□□□□ -0.48
TMEM55A-202ENST00000518359 CDRT15L2A8MXV6 281 aa12.03□□□□□ -0.48
TMEM55A-202ENST00000518359 F5H5T6 163 aa12.03□□□□□ -0.48
TMEM55A-202ENST00000518359 H3BM21 787 aa12.03□□□□□ -0.48
TMEM55A-202ENST00000518359 K7ESM1 405 aa12.03□□□□□ -0.48
TMEM55A-202ENST00000518359 PIK3R2O00459 728 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms