RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 KCTD6Q8NC69 237 aa12.13□□□□□ -0.47
AP3B1-203ENST00000517940 TRIM58Q8NG06 486 aa12.13□□□□□ -0.47
AP3B1-203ENST00000517940 PJA1Q8NG27 643 aa12.13□□□□□ -0.47
AP3B1-203ENST00000517940 LRRN4Q8WUT4 740 aa12.13□□□□□ -0.47
AP3B1-203ENST00000517940 TTC17Q96AE7 1141 aa12.13□□□□□ -0.47
AP3B1-203ENST00000517940 CELF6Q96J87 481 aaKnown RBP12.13□□□□□ -0.47
AP3B1-203ENST00000517940 XPO6Q96QU8 1125 aaKnown RBP12.13□□□□□ -0.47
AP3B1-203ENST00000517940 CALN1Q9BXU9 219 aa12.13□□□□□ -0.47
AP3B1-203ENST00000517940 SLC39A8Q9C0K1 460 aa12.13□□□□□ -0.47
AP3B1-203ENST00000517940 DDX56Q9NY93 547 aaKnown RBP12.13□□□□□ -0.47
AP3B1-203ENST00000517940 NDRG2Q9UN36 371 aaKnown RBP12.13□□□□□ -0.47
AP3B1-203ENST00000517940 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.12□□□□□ -0.47
AP3B1-203ENST00000517940 ILVBLA1L0T0 632 aa12.12□□□□□ -0.47
AP3B1-203ENST00000517940 H0Y626 953 aa12.12□□□□□ -0.47
AP3B1-203ENST00000517940 TNFRSF10AO00220 468 aa12.12□□□□□ -0.47
AP3B1-203ENST00000517940 ENC1O14682 589 aa12.12□□□□□ -0.47
AP3B1-203ENST00000517940 ADAM23O75077 832 aa12.12□□□□□ -0.47
AP3B1-203ENST00000517940 PEX11BO96011 259 aa12.12□□□□□ -0.47
AP3B1-203ENST00000517940 MT-CO1P00395 513 aa12.12□□□□□ -0.47
AP3B1-203ENST00000517940 RHOCP08134 193 aa12.12□□□□□ -0.47
AP3B1-203ENST00000517940 PECAM1P16284 738 aaPredicted RBP12.12□□□□□ -0.47
AP3B1-203ENST00000517940 OR1E1P30953 314 aa12.12□□□□□ -0.47
AP3B1-203ENST00000517940 GRIA2P42262 883 aa12.12□□□□□ -0.47
AP3B1-203ENST00000517940 STK19P49842 368 aaPredicted RBP12.12□□□□□ -0.47
AP3B1-203ENST00000517940 ZNF135P52742 658 aaPredicted RBP12.12□□□□□ -0.47
AP3B1-203ENST00000517940 KLF1Q13351 362 aaPredicted RBP12.12□□□□□ -0.47
AP3B1-203ENST00000517940 ZNF177Q13360 481 aaPredicted RBP12.12□□□□□ -0.47
AP3B1-203ENST00000517940 ENPP2Q13822 863 aa12.12□□□□□ -0.47
AP3B1-203ENST00000517940 PAFAH1B3Q15102 231 aaKnown RBP12.12□□□□□ -0.47
AP3B1-203ENST00000517940 PPP2R5EQ16537 467 aa12.12□□□□□ -0.47
AP3B1-203ENST00000517940 ZNF569Q5MCW4 686 aa12.12□□□□□ -0.47
AP3B1-203ENST00000517940 MBLAC2Q68D91 279 aa12.12□□□□□ -0.47
AP3B1-203ENST00000517940 ZNF852Q6ZMS4 543 aa12.12□□□□□ -0.47
AP3B1-203ENST00000517940 NYAP1Q6ZVC0 841 aa12.12□□□□□ -0.47
AP3B1-203ENST00000517940 CYB5D2Q8WUJ1 264 aa12.12□□□□□ -0.47
AP3B1-203ENST00000517940 CLDN23Q96B33 292 aa12.12□□□□□ -0.47
AP3B1-203ENST00000517940 PDFQ9HBH1 243 aa12.12□□□□□ -0.47
AP3B1-203ENST00000517940 DTLQ9NZJ0 730 aa12.12□□□□□ -0.47
AP3B1-203ENST00000517940 SAE1Q9UBE0 346 aaPredicted RBP12.12□□□□□ -0.47
AP3B1-203ENST00000517940 VPS51Q9UID3 782 aa12.12□□□□□ -0.47
AP3B1-203ENST00000517940 STARD13Q9Y3M8 1113 aa12.12□□□□□ -0.47
AP3B1-203ENST00000517940 FAM86C2PA6NEL3 165 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 FAM170BA6NMN3 283 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 MIF4GDA9UHW6 222 aaKnown RBP12.11□□□□□ -0.47
AP3B1-203ENST00000517940 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.11□□□□□ -0.47
AP3B1-203ENST00000517940 RASA4BC9J798 803 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 K7ERQ8 282 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 MAN2B1O00754 1011 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 RASA4O43374 803 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 RNF40O75150 1001 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 ZNF821O75541 412 aaPredicted RBP12.11□□□□□ -0.47
AP3B1-203ENST00000517940 APODP05090 189 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 DRD1P21728 446 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 ARL4AP40617 200 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 SEC13P55735 322 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 RWDD2BP57060 319 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 SERINC3Q13530 473 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 UBXN2BQ14CS0 331 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 SIX1Q15475 284 aaPredicted RBP12.11□□□□□ -0.47
AP3B1-203ENST00000517940 TFDP3Q5H9I0 405 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 SUGP1Q8IWZ8 645 aaKnown RBP12.11□□□□□ -0.47
AP3B1-203ENST00000517940 AHI1Q8N157 1196 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 DCAF4L2Q8NA75 395 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 IL17RCQ8NAC3 791 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 USP33Q8TEY7 942 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 OLFM3Q96PB7 478 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 RETREG1Q9H6L5 497 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 CATSPERBQ9H7T0 1116 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 ELOVL2Q9NXB9 296 aa12.11□□□□□ -0.47
AP3B1-203ENST00000517940 KIAA1522Q9P206 1035 aaPredicted RBP12.11□□□□□ -0.47
AP3B1-203ENST00000517940 EML5Q05BV3 1969 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 TYW5A2RUC4 315 aaKnown RBP12.1□□□□□ -0.47
AP3B1-203ENST00000517940 TBC1D3BA6NDS4 549 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 WASH3PC4AMC7 463 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 J3KR12 359 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 RNF103O00237 685 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 SMAD6O43541 496 aaKnown RBP12.1□□□□□ -0.47
AP3B1-203ENST00000517940 RAMP2O60895 175 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 ZRANB2O95218 330 aaKnown RBP eCLIP12.1□□□□□ -0.47
AP3B1-203ENST00000517940 DCNP07585 359 aaKnown RBP12.1□□□□□ -0.47
AP3B1-203ENST00000517940 ALADP13716 330 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 VAV1P15498 845 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 COL9A1P20849 921 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 PRKCHP24723 683 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 IL12RB1P42701 662 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 TNFRSF4P43489 277 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 PAPOLAP51003 745 aaKnown RBP12.1□□□□□ -0.47
AP3B1-203ENST00000517940 NDST2P52849 883 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 AMPD2Q01433 879 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 GALNT2Q10471 571 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 GRSF1Q12849 480 aaKnown RBP eCLIP12.1□□□□□ -0.47
AP3B1-203ENST00000517940 DGKKQ5KSL6 1271 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 C6orf118Q5T5N4 469 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 LINGO4Q6UY18 593 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 ZNF783Q6ZMS7 281 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 LEKR1Q6ZMV7 388 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 BBS12Q6ZW61 710 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 B4GALNT4Q76KP1 1039 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 RCOR2Q8IZ40 523 aa12.1□□□□□ -0.47
AP3B1-203ENST00000517940 TMEM105Q8N8V8 129 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms