RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 ALADP13716 330 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 SPANXN3Q5MJ09 141 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 C10orf120Q5SQS8 335 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 CGB2Q6NT52 195 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 FAM47EQ6ZV65 393 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 FBXO22Q8NEZ5 403 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 SPOCK2Q92563 424 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 TOX2Q96NM4 488 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 MARCH2Q9P0N8 246 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 CACNG3O60359 315 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 RFPL1O75677 317 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 MS4A13Q5J8X5 152 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 OTOP3Q7RTS5 596 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 MIB1Q86YT6 1006 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 ZNF683Q8IZ20 524 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 ZNF784Q8NCA9 323 aaPredicted RBP27.12■■□□□ 1.93
COL13A1-210ENST00000517713 GIPC2Q8TF65 315 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 CCT6BQ92526 530 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 IL12RB2Q99665 862 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 UBP1Q9NZI7 540 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 FNIP2Q9P278 1114 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 RPS6KL1Q9Y6S9 549 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 COPEO14579 308 aa27.11■■□□□ 1.93
COL13A1-210ENST00000517713 CNTFP26441 200 aa27.11■■□□□ 1.93
COL13A1-210ENST00000517713 MNX1P50219 401 aaPredicted RBP27.11■■□□□ 1.93
COL13A1-210ENST00000517713 NAB1Q13506 487 aa27.11■■□□□ 1.93
COL13A1-210ENST00000517713 PSMD5Q16401 504 aa27.11■■□□□ 1.93
COL13A1-210ENST00000517713 TIGD7Q6NT04 549 aaPredicted RBP27.11■■□□□ 1.93
COL13A1-210ENST00000517713 ZNF75CPQ92670 426 aaPredicted RBP27.11■■□□□ 1.93
COL13A1-210ENST00000517713 KDM4CQ9H3R0 1056 aa27.11■■□□□ 1.93
COL13A1-210ENST00000517713 GREB1Q4ZG55 1949 aa27.11■■□□□ 1.93
COL13A1-210ENST00000517713 HMX2A2RU54 273 aa27.11■■□□□ 1.93
COL13A1-210ENST00000517713 NPY2RP49146 381 aa27.11■■□□□ 1.93
COL13A1-210ENST00000517713 MROH9Q5TGP6 573 aa27.11■■□□□ 1.93
COL13A1-210ENST00000517713 LRRC49Q8IUZ0 686 aa27.11■■□□□ 1.93
COL13A1-210ENST00000517713 KLHDC8BQ8IXV7 354 aa27.11■■□□□ 1.93
COL13A1-210ENST00000517713 BTN2A3PQ96KV6 586 aa27.11■■□□□ 1.93
COL13A1-210ENST00000517713 VPS11Q9H270 941 aa27.11■■□□□ 1.93
COL13A1-210ENST00000517713 PRDM5Q9NQX1 630 aaPredicted RBP27.11■■□□□ 1.93
COL13A1-210ENST00000517713 PHTF1Q9UMS5 762 aa27.11■■□□□ 1.93
COL13A1-210ENST00000517713 SLC38A8A6NNN8 435 aa27.1■■□□□ 1.93
COL13A1-210ENST00000517713 ADAM12O43184 909 aa27.1■■□□□ 1.93
COL13A1-210ENST00000517713 EFEMP2O95967 443 aa27.1■■□□□ 1.93
COL13A1-210ENST00000517713 CCNFP41002 786 aa27.1■■□□□ 1.93
COL13A1-210ENST00000517713 PAPOLAP51003 745 aaKnown RBP27.1■■□□□ 1.93
COL13A1-210ENST00000517713 IKBKEQ14164 716 aa27.1■■□□□ 1.93
COL13A1-210ENST00000517713 USP41Q3LFD5 358 aa27.1■■□□□ 1.93
COL13A1-210ENST00000517713 NAPEPLDQ6IQ20 393 aa27.1■■□□□ 1.93
COL13A1-210ENST00000517713 CES3Q6UWW8 571 aa27.1■■□□□ 1.93
COL13A1-210ENST00000517713 C10orf67Q8IYJ2 551 aa27.1■■□□□ 1.93
COL13A1-210ENST00000517713 ZYG11BQ9C0D3 744 aa27.1■■□□□ 1.93
COL13A1-210ENST00000517713 CWH43Q9H720 699 aa27.1■■□□□ 1.93
COL13A1-210ENST00000517713 PPARGC1AQ9UBK2 798 aaKnown RBP27.1■■□□□ 1.93
COL13A1-210ENST00000517713 MTRRQ9UBK8 725 aa27.1■■□□□ 1.93
COL13A1-210ENST00000517713 ARL2BPQ9Y2Y0 163 aa27.1■■□□□ 1.93
COL13A1-210ENST00000517713 AAR2Q9Y312 384 aaKnown RBP27.1■■□□□ 1.93
COL13A1-210ENST00000517713 STARD13Q9Y3M8 1113 aa27.1■■□□□ 1.93
COL13A1-210ENST00000517713 MICAL3Q7RTP6 2002 aa27.1■■□□□ 1.93
COL13A1-210ENST00000517713 SLC12A8A0AV02 714 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 WDR91A4D1P6 747 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 RHOQP17081 205 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 ETV4P43268 484 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 MGAT5Q09328 741 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 SLC8B1Q6J4K2 584 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 ZNF276Q8N554 614 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 FCRL3Q96P31 734 aaPredicted RBP27.09■■□□□ 1.93
COL13A1-210ENST00000517713 FAM111AQ96PZ2 611 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 FCRL5Q96RD9 977 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 SRPK1Q96SB4 655 aaKnown RBP27.09■■□□□ 1.93
COL13A1-210ENST00000517713 APOL2Q9BQE5 337 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 BEGAINQ9BUH8 593 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 IQCGQ9H095 443 aaKnown RBP27.09■■□□□ 1.93
COL13A1-210ENST00000517713 GLOD4Q9HC38 313 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 PRKAG3Q9UGI9 489 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 AP3B1O00203 1094 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 ZDHHC11BP0C7U3 371 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 DHRS4L1P0CG22 281 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 ATF6P18850 670 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 CERCAMQ5T4B2 595 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 ZNF449Q6P9G9 518 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 PACS1Q6VY07 963 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 TIFABQ6ZNK6 161 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 LINC00523Q86TU6 105 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 RASSF3Q86WH2 238 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP27.09■■□□□ 1.93
COL13A1-210ENST00000517713 CERS2Q96G23 380 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 SLCO1B3Q9NPD5 702 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 SLC17A6Q9P2U8 582 aa27.09■■□□□ 1.93
COL13A1-210ENST00000517713 MAGEB16A2A368 324 aa27.08■■□□□ 1.93
COL13A1-210ENST00000517713 EDF1O60869 148 aaKnown RBP27.08■■□□□ 1.93
COL13A1-210ENST00000517713 HMBSP08397 361 aa27.08■■□□□ 1.93
COL13A1-210ENST00000517713 LIG3P49916 1009 aa27.08■■□□□ 1.93
COL13A1-210ENST00000517713 CNKSR3Q6P9H4 555 aa27.08■■□□□ 1.93
COL13A1-210ENST00000517713 TMEM135Q86UB9 458 aa27.08■■□□□ 1.93
COL13A1-210ENST00000517713 UMODL1-AS1Q8N2C9 162 aa27.08■■□□□ 1.93
COL13A1-210ENST00000517713 NOL6Q9H6R4 1146 aaKnown RBP27.08■■□□□ 1.93
COL13A1-210ENST00000517713 NYNRINQ9P2P1 1898 aaKnown RBP27.08■■□□□ 1.93
COL13A1-210ENST00000517713 MAGED2Q9UNF1 606 aaPredicted RBP27.08■■□□□ 1.93
COL13A1-210ENST00000517713 USP1O94782 785 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 IGLV3-27P01718 113 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms