RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 UBA3Q8TBC4 463 aa11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 FAM174AQ8TBP5 190 aa11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 OR8D1Q8WZ84 308 aa11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 CCDC47Q96A33 483 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 IFT43Q96FT9 208 aa11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 FCRL2Q96LA5 508 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 APOLD1Q96LR9 279 aa11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 PPP1R9BQ96SB3 815 aa11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 NUCKS1Q9H1E3 243 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 UCKL1Q9NWZ5 548 aa11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 NCKIPSDQ9NZQ3 722 aa11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 USP25Q9UHP3 1055 aa11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 SERTAD1Q9UHV2 236 aa11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 PCDHA7Q9UN72 937 aa11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 HEMK1Q9Y5R4 338 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 COL27A1Q8IZC6 1860 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 PYCARD-AS1I3L0S3 204 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 O00370 1275 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 PIAS2O75928 621 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 FBXO21O94952 628 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 ANP32AP39687 249 aaKnown RBP11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 MLLT3P42568 568 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 STK19P49842 368 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 VASPP50552 380 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 OXCT1P55809 520 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 NUCB2P80303 420 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 SKOR1P84550 965 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 CCDC15Q0P6D6 951 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 CNTN1Q12860 1018 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 CUL2Q13617 745 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 ISXQ2M1V0 245 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 DCAF6Q58WW2 860 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 C3orf38Q5JPI3 329 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 TTC39BQ5VTQ0 682 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 NEK5Q6P3R8 708 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 LCLAT1Q6UWP7 414 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 CCDC81Q6ZN84 652 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 APCDD1Q8J025 514 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 CFAP52Q8N1V2 620 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 MAPK15Q8TD08 544 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 MYEOVQ96EZ4 313 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 SLC46A1Q96NT5 459 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 TRIM62Q9BVG3 475 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 FAM117AQ9C073 453 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 SATB2Q9UPW6 733 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 PCDHGA8Q9Y5G5 932 aa11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 TDRD6O60522 2096 aaKnown RBP11.81□□□□□ -0.52
TRAPPC9-203ENST00000517667 BOD1L1Q8NFC6 3051 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 SCAMP1O15126 338 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 SART1O43290 800 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 MOCS2O96007 188 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 APOEP02649 317 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 VAV1P15498 845 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 AKT2P31751 481 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 METAP1P53582 386 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 STILQ15468 1287 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 POM121L1PQ3SYA9 428 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 KIAA1614Q5VZ46 1190 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 ZCCHC8Q6NZY4 707 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 XKR5Q6UX68 686 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 CHSY1Q86X52 802 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 DCP2Q8IU60 420 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 LGI2Q8N0V4 545 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 GUF1Q8N442 669 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 ARL14Q8N4G2 192 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 TPCN2Q8NHX9 752 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 IFI44Q8TCB0 444 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 DQX1Q8TE96 717 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 FRS2Q8WU20 508 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 SLC35F5Q8WV83 523 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 EEF2KMTQ96G04 330 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 SLC39A13Q96H72 371 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 BTN2A3PQ96KV6 586 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 HSFY1Q96LI6 401 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 CALN1Q9BXU9 219 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 IL17BQ9UHF5 180 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 SLC25A13Q9UJS0 675 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 SARDHQ9UL12 918 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 PPM1HQ9ULR3 514 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 CA5BQ9Y2D0 317 aa11.8□□□□□ -0.52
TRAPPC9-203ENST00000517667 F5H5T6 163 aa11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 MCF2LO15068 1137 aa11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 TCEA3O75764 348 aa11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 RHOBTB3O94955 611 aa11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 PAEPP09466 180 aa11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 GIMD1P0DJR0 217 aa11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 EPB41P11171 864 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 ZNF18P17022 549 aa11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 TACR2P21452 398 aa11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 HNRNPA2B1P22626 353 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 TBXAS1P24557 533 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 RGS7P49802 495 aa11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 PLK1P53350 603 aa11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 HNRNPKP61978 463 aaKnown RBP eCLIP11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 EDRF1Q3B7T1 1238 aa11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 ACCSLQ4AC99 568 aa11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 ATL3Q6DD88 541 aa11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 PMF1Q6P1K2 205 aa11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 RBM44Q6ZP01 1051 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 ERCC4Q92889 916 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms