RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 STON2Q8WXE9 905 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ESAMQ96AP7 390 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ZDHHC12Q96GR4 267 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 APOLD1Q96LR9 279 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 TTC14Q96N46 770 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 NPAS1Q99742 590 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PIP5K1AQ99755 562 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 WDR77Q9BQA1 342 aaPredicted RBP-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SENP7Q9BQF6 1050 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PINK1Q9BXM7 581 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 HES7Q9BYE0 225 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SLC39A8Q9C0K1 460 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 C11orf54Q9H0W9 315 aaPredicted RBP-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 EPN3Q9H201 632 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 KLHL1Q9NR64 748 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ATAD3AQ9NVI7 634 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 DKK4Q9UBT3 224 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 NDOR1Q9UHB4 597 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PRSS50Q9UI38 385 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 RIMKLBQ9ULI2 386 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 STRIP2Q9ULQ0 834 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PLCL2Q9UPR0 1127 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 DNM3Q9UQ16 869 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 LAMP3Q9UQV4 416 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 RUVBL1Q9Y265 456 aaKnown RBP-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 MAGED1Q9Y5V3 778 aaPredicted RBP-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ZNF407Q9C0G0 2248 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 DISP3Q9P2K9 1392 aa-0.63□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SPATA31A1Q5TZJ5 1347 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SDK2Q58EX2 2172 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 IGLV3-16A0A075B6K0 115 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 DPPA5A6NC42 116 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PINLYPA6NC86 204 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 C3orf70A6NLC5 250 aaPredicted RBP-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 COLCA2A8K830 154 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 RHODO00212 210 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PRODHO43272 600 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 TMPRSS11DO60235 418 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PMPCBO75439 489 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 HAPLN1P10915 354 aaPredicted RBP-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PABPC1P11940 636 aaKnown RBP-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CEACAM1P13688 526 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 NAGAP17050 411 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CHRNB2P17787 502 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CD72P21854 359 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 NFKBIAP25963 317 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ADSLP30566 484 aaPredicted RBP-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 DCTP40126 519 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 HNF4AP41235 474 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PPOXP50336 477 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 TOB1P50616 345 aaPredicted RBP-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 POLE2P56282 527 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 EIF6P56537 245 aaKnown RBP-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PER3P56645 1201 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PPARDQ03181 441 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PAX8Q06710 450 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ZNF33BQ06732 778 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 TCF15Q12870 199 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 IFRD2Q12894 506 aaPredicted RBP-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 NEUROD2Q15784 382 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ARHGAP44Q17R89 818 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 EEF1AKMT2Q5JPI9 291 aaKnown RBP-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ATAT1Q5SQI0 421 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 GPR158Q5T848 1215 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 B4GALNT3Q6L9W6 998 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 HMBOX1Q6NT76 420 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 TMEM108Q6UXF1 575 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ATF7IPQ6VMQ6 1270 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ZNF836Q6ZNA1 936 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 KDELC2Q7Z4H8 507 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CAND1Q86VP6 1230 aaKnown RBP-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CAMK1DQ8IU85 385 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 LYSMD2Q8IV50 215 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 RASGRP3Q8IV61 690 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CROCCP3Q8IVE0 287 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PGBD5Q8N414 524 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 RNF182Q8N6D2 247 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 STPG4Q8N801 248 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 KIAA1958Q8N8K9 716 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 KCNH5Q8NCM2 988 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 GPR156Q8NFN8 814 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 IL31RAQ8NI17 732 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 TBC1D16Q8TBP0 767 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 OSCP1Q8WVF1 389 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 FIG4Q92562 907 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 HOXB13Q92826 284 aaPredicted RBP-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SMARCD2Q92925 531 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PTPRN2Q92932 1015 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 USP7Q93009 1102 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SCAMP4Q969E2 229 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 TOMM40LQ969M1 308 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 MKL1Q969V6 931 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CYFIP2Q96F07 1278 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 EDC3Q96F86 508 aaKnown RBP-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SIPA1Q96FS4 1042 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 REXO5Q96IC2 774 aaKnown RBP-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 GMPPAQ96IJ6 420 aaPredicted RBP-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ZNF583Q96ND8 569 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms