RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 VPS45Q9NRW7 570 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 TDP1Q9NUW8 608 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 DISP3Q9P2K9 1392 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 NACAE9PAV3 2078 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 DYTNA2CJ06 578 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 CA12O43570 354 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 OPA1O60313 960 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 GAS7O60861 476 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 KDM4BO94953 1096 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 ASLP04424 464 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 MCM3P25205 808 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 SSTR2P30874 369 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 CYP2C19P33261 490 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 FMO5P49326 533 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 CARSP49589 748 aaKnown RBP-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 KPNA1P52294 538 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 DGKEP52429 567 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 MS4A2Q01362 244 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 DMWDQ09019 674 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 TUBB2AQ13885 445 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 TMEM71Q6P5X7 295 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 ZNF474Q6S9Z5 364 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 OLFM4Q6UX06 510 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 DHRS13Q6UX07 377 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 TIFABQ6ZNK6 161 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 IQCHQ86VS3 1027 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 METTL16Q86W50 562 aaKnown RBP-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 SFR1Q86XK3 245 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 POM121L12Q8N7R1 296 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 FAM71DQ8N9W8 422 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 DDHD1Q8NEL9 900 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 OR1N1Q8NGS0 311 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 FIG4Q92562 907 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 RASL10AQ92737 203 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 ZNF799Q96GE5 643 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 ZNF419Q96HQ0 510 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 CLUHP3Q96NS8 147 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 TUBB2BQ9BVA1 445 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 C1orf43Q9BWL3 253 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 C1orf115Q9H7X2 142 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 CLK4Q9HAZ1 481 aaKnown RBP-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 PDFQ9HBH1 243 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 GBA2Q9HCG7 927 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 TOPORSQ9NS56 1045 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 HCFC1R1Q9NWW0 138 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 VSIG4Q9Y279 399 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 EPB41L3Q9Y2J2 1087 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 PCDHA13Q9Y5I0 950 aa-0.61□□□□□ -2.51
RNU6-539P-201ENST00000516665 EMSYQ7Z589 1322 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 MAST4O15021 2626 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 PCNX2A6NKB5 2137 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 WI2-2373I1.2A0A1W2PRP0 233 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 NPIPB5A8MRT5 1133 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 NPIPB4C9JG80 1138 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 STMND1H3BQB6 276 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 SLC33A1O00400 549 aaPredicted RBP-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 STRNO43815 780 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 IGHV3-13P01766 116 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 ALDH2P05091 517 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 LINC00271P0C7V0 271 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 AKR1A1P14550 325 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 BCL3P20749 454 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 TNFSF8P32971 234 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 HOXD12P35452 270 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 DCTP40126 519 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 MTHFRP42898 656 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 KRTAP10-4P60372 401 aaPredicted RBP-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 WSCD2Q2TBF2 565 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 PTCHD3Q3KNS1 767 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 SFMBT2Q5VUG0 894 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 ZBED8Q8IZ13 594 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 TYMSOSQ8TAI1 123 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 NUS1Q96E22 293 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 PUS7Q96PZ0 661 aaKnown RBP-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 VN1R3Q9BXE9 311 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 YTHDF1Q9BYJ9 559 aaKnown RBP-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 B3GNT4Q9C0J1 378 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 PNRC2Q9NPJ4 139 aaKnown RBP-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 C2orf42Q9NWW7 574 aa-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 SIDT1Q9NXL6 827 aaKnown RBP-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 KLHL8Q9P2G9 620 aaPredicted RBP-0.62□□□□□ -2.51
RNU6-539P-201ENST00000516665 SPATA31A5Q5VU36 1347 aa-0.63□□□□□ -2.51
RNU6-539P-201ENST00000516665 FAM205AQ6ZU69 1335 aa-0.63□□□□□ -2.51
RNU6-539P-201ENST00000516665 SPATA31A7Q8IWB4 1347 aa-0.63□□□□□ -2.51
RNU6-539P-201ENST00000516665 DSTQ03001 7570 aaKnown RBP-0.63□□□□□ -2.51
RNU6-539P-201ENST00000516665 IGKV1D-17A0A075B6S4 117 aa-0.63□□□□□ -2.51
RNU6-539P-201ENST00000516665 A0A087WWL8 130 aa-0.63□□□□□ -2.51
RNU6-539P-201ENST00000516665 TMEM178BH3BS89 294 aa-0.63□□□□□ -2.51
RNU6-539P-201ENST00000516665 RAB11FIP3O75154 756 aa-0.63□□□□□ -2.51
RNU6-539P-201ENST00000516665 NEURL1O76050 574 aa-0.63□□□□□ -2.51
RNU6-539P-201ENST00000516665 ITGA2BP08514 1039 aa-0.63□□□□□ -2.51
RNU6-539P-201ENST00000516665 GP9P14770 177 aa-0.63□□□□□ -2.51
RNU6-539P-201ENST00000516665 LRPAP1P30533 357 aa-0.63□□□□□ -2.51
RNU6-539P-201ENST00000516665 MAP2K2P36507 400 aa-0.63□□□□□ -2.51
RNU6-539P-201ENST00000516665 PPP3CCP48454 512 aa-0.63□□□□□ -2.51
RNU6-539P-201ENST00000516665 AGFG1P52594 562 aaKnown RBP-0.63□□□□□ -2.51
RNU6-539P-201ENST00000516665 ZNF133P52736 654 aaPredicted RBP-0.63□□□□□ -2.51
RNU6-539P-201ENST00000516665 TMPRSS3P57727 454 aa-0.63□□□□□ -2.51
RNU6-539P-201ENST00000516665 TIRAPP58753 221 aa-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms